Cyprinus carpio (common carp): 109105342
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Entry
109105342 CDS
T05134
Name
(RefSeq) transcription factor Sox-9-A-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109105342
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109105342
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109105342
NCBI-ProteinID:
XP_042590673
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Position
B12
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AA seq
448 aa
AA seq
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MNLLDPYLKMTEEQEKCLSDAPSPSMSEDSAGSPGSGSGSDTENTRLAAPDATLGEFKKD
EEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLA
DQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKN
GQSESEDGSEQTHISPNAIFKALQQADSPASSMGEVHSPSEHSGQSQGPPTPPTTPKTDA
QPGKVDLKREARPLQESTGRPLNIDFRDVDIGELSSDVIETFDVNEFDQYLPPNGHATNA
SYYATWMGKPQNGSPPNAQLTGEQEQPRTTHIKTEQLSPSHYNDQGSPQQASYGSFNVQH
LQHYSTSFPSITRAQYDYSDHQGGANSYYTHAGGQSSGLYSTFSYMSSSQRPMYTPIADS
AGVPSIPQPNHSPQHWDQQPVYTQLSRP
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactagatccctacctgaaaatgacagaggagcaagagaagtgtctgtctgat
gccccaagtccgagcatgtccgaggactccgcgggctccccgggctccggctcgggctcc
gacaccgaaaacacccgcctcgcggctccggacgcgacgctcggcgagttcaagaaggac
gaagaagacaagttcccggtgtgcatccgagaggcggtgtctcaggtgctgaaaggctac
gactggacgctggtgcccatgccggtgagagtgaacggctcgagcaaaaacaagcctcac
gtgaagagaccgatgaacgcgtttatggtgtgggcgcaagcggcgcgcaggaagctcgcg
gatcagtatccgcacctccacaacgccgagctcagcaaaactctgggcaaactttggaga
ttgctgaacgagggtgaaaagcgtcccttcgtggaggaggctgaacgcctcagggttcag
cacaaaaaagatcaccctgactacaagtatcagcccaggcggaggaagtctgtgaagaac
ggccagagcgagtctgaggacggcagcgagcagactcacatctccccgaatgccatcttc
aaagccctccagcaagccgactcgcccgcatccagcatgggagaggtgcactcgcccagc
gagcactcaggccagtcccaagggccgcccactcctcccaccactccgaaaactgacgcg
cagccaggcaaagtggatctgaagcgagaggcccgtccgcttcaggaaagcacgggacgc
ccgctcaacatcgacttccgcgatgtggacatcggcgagctcagcagcgacgtcatcgaa
acgttcgacgtcaacgagtttgatcagtacctgccgccgaatgggcatgccaccaatgca
tcctactatgccacctggatggggaagcctcaaaacggcagccctccgaacgcccagctt
actggagagcaagagcaaccgagaacgacgcacatcaaaaccgagcagctcagccccagc
cactacaacgatcagggctctccgcagcaagccagctacggctccttcaacgtccagcac
ctccagcactacagcacttcgtttccatccatcaccagggcgcagtacgattactccgac
caccagggcggcgccaactcctattacacccacgctggaggtcagagctccggcttgtac
tccaccttcagctacatgagctccagccagaggcccatgtacacacccatcgctgactct
gccggggttccttccattccccaacccaaccacagtccccagcactgggaccagcagccg
gtctacacacagctgtccagaccctga
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