Cyprinus carpio (common carp): 109105366
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Entry
109105366 CDS
T05134
Name
(RefSeq) DNA repair and recombination protein RAD54B-like isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109105366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109105366
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109105366
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Paralog
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Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
109105366
NCBI-ProteinID:
XP_042596993
UniProt:
A0A9R0AG15
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All DBs
Position
B16:15769272..15780968
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AA seq
915 aa
AA seq
DB search
MRRSGAPSQLHGNTAKKQRFIPPGPAKNDGPPLSHPHPEPSAPAPTPALGNVLLNKVQRC
LSSGDTPAVTNAPVASKALARVLSAVPHGECKENSFSSSPDFSEPEKGADKDSCSTQPNT
LASGTATARYYSVMWCKASSRKHKRWEGDAVLVARGRTVVLKDMEGRDIGRGAGYKASEL
ESLCEGQTLMVGGKQIEVMGVISDEDYAKGRCFQNAAVETPAETVLKAPVYRPVSKSFTK
PALKGGALTDSEPEKPICKPRHDLNAPGALVMPRPTTDHQWLYNKSGSPLVDVVIDPHLT
NHLRPHQKEGVVFLYECLMGMRLPGRCGAILADEMGLGKTLQCVCVLWTLLRQGPYGGRP
VLKRALVVCPGSLVKNWAAEFNKWLGRERISVYTVDQDHRVEDFVSSPLCSVMVISYEML
LRSVDQLKELEFGVLICDEGHRLKNSNIKTAGALTALSCERRLILTGTPVQNDLQEFYSI
IEFVNPGILGTSAAYRKIYEEPILRSRQPTCTEEERCIGEERAAELFRLTGVFTLRRTQE
IINRYLSERIEWTVFCKPTELQLRLYGVLLATRPIRACLSGARTHTYTHSPHLACINALK
KLCNHPGLLYNTLQEKSDEMFEDGIMELFPEGYSTGAFSTADSGKLLVLTDLLSAIQHVN
RTDRVVLVSNYTQTLDLLQDVCDHTGYKWCRLDGQTPVAQRQRIVDSFNSPHSSSFLLLL
SSKAGGVGLNLIGASHLVLYDLDWNPANDIQAMAQVWRDGQKKTVHIYRFLTTGSIEEKI
YQRQVSKQGLSGTVVDLSKKAEHISFSAEELRDLFSFDPNTTCLTHDLLDCQCTGDGNTP
GFVKEIEEDTGRACQLGRHCDSTASFPQRVSMSELMHWRHFSGDVQSYDDIYLNHARNNI
TYAFQSTTSKSQTTV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagatctggagctccgagtcagctccatggaaatactgctaagaaacaaaggttt
ataccaccagggcccgcaaagaatgatggaccacctttatctcatccccatccagaaccg
tcagcaccagcacccacacctgctttgggaaatgtgctgctcaataaggtccagaggtgt
ttgagcagtggagatactccagctgtgactaatgctccagtggccagtaaggctttagcc
agggtgctgagtgcagttcctcacggtgaatgtaaggaaaacagctttagttcttcacct
gacttttctgaacctgaaaaaggagcagataaagacagctgctcaacgcagccaaacacg
ctcgccagtggcacagctaccgcacgctactatagtgtaatgtggtgcaaggcgtcatca
aggaagcataagcgctgggaaggcgacgctgtgcttgttgccagggggcggactgttgtc
ctcaaagacatggaggggcgggacattggacgaggtgcaggctataaggcatcagagctg
gagagcttgtgtgagggtcagactcttatggtaggagggaagcaaatcgaggtcatgggg
gtcatatccgatgaggactatgccaaaggccgttgttttcaaaatgctgctgttgagact
cctgcagaaacagtcttgaaggctcctgtatatcgaccagtgtccaaatcctttaccaaa
ccagcactcaagggaggtgcgcttacagattctgaacctgaaaaaccaatctgtaaaccc
agacatgacctgaacgcaccaggtgcccttgtgatgccacgacctacaactgatcaccag
tggctgtataataaatctggttctcctctggtggatgtggtcatcgacccccatttgacc
aatcatcttcggccacatcaaaaagagggtgtggtcttcctttatgaatgtttaatggga
atgagactgcctggccgctgcggggctattctggcagatgagatgggactggggaagacg
ctgcagtgtgtttgtgttctgtggacactactgagacagggcccctacggtggacgtcct
gtattgaagagggcacttgtggtttgtccaggaagtctggtcaagaactgggctgctgag
ttcaacaagtggctgggcagggagaggatcagtgtttacactgtggaccaggatcaccgt
gtggaggactttgtgtcttctcctctttgctccgtcatggtgatcagttacgagatgctg
ttgcgctctgtggaccagctgaaagagctggagtttggagtgctcatctgtgacgagggt
catcgccttaaaaacagcaacatcaaaacggccggcgcactcacagccctctcatgtgaa
cgccgtcttatattaacaggtactccagtacagaatgacctgcaggaattttattccatc
attgagtttgtaaatccaggaattctgggaacatctgcagcctacaggaagatttatgaa
gaacccattctcagatctcgccagcccacctgcactgaggaagagcggtgcattggagag
gagcgtgccgctgagctctttcgtctaacaggtgtgtttacgttacggcgcactcaggag
atcattaatcggtatttatccgagcggatagagtggaccgtattctgcaaacccactgaa
ctgcagctgcgtttgtatggagtcctgctggccacacggcccatcagagcctgcctctct
ggtgcccgcacacacacttacacacacagcccacaccttgcatgcatcaacgccctcaag
aaactctgcaaccaccccgggctgctctacaacactttacaggaaaagtcagatgagatg
tttgaggatggaataatggaactctttcctgagggatactcaacaggtgccttcagcact
gcagactctgggaaacttctagtgctaacagacctgctgtcagcaatacagcacgtcaat
cgcacagacagggtagttttggtgtccaactacacacaaactcttgacttactgcaggat
gtctgtgatcatacaggctataaatggtgtcggcttgatggacagacacctgtagcccag
cgacaacgaattgttgattccttcaacagcccacattcatccagcttcctgttgctactc
agctccaaggctggaggggtgggactaaacctcattggtgcttcccatcttgttttatat
gatttagactggaaccctgccaatgacatacaggccatggcacaagtgtggcgagatgga
cagaagaaaacagtgcacatctacagatttcttacaacaggttcaatagaagaaaagatt
tatcagagacaggtgagtaaacaggggctttctgggacagtggtggacctgtccaagaaa
gcggagcatattagcttttcagctgaggagctacgggaccttttcagttttgaccctaat
accacctgcctcacacatgacctactggactgccagtgcactggagatggaaatactcca
ggttttgtgaaggagatagaggaggacaccggaagggcatgtcagctgggtcgccactgc
gacagcacagcatcatttccacaacgagtcagcatgtccgagctcatgcactggaggcat
ttctctggagatgttcagtcatatgatgatatttatctaaatcatgcccgtaacaacatc
acatatgccttccaaagcaccacttccaaatcccaaaccacagtctaa
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