Cyprinus carpio (common carp): 109105487
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Entry
109105487 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: interferon a3-like
KO
K05414
interferon alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04060
Cytokine-cytokine receptor interaction
ccar04217
Necroptosis
ccar04620
Toll-like receptor signaling pathway
ccar04621
NOD-like receptor signaling pathway
ccar04622
RIG-I-like receptor signaling pathway
ccar04623
Cytosolic DNA-sensing pathway
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109105487
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109105487
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109105487
04621 NOD-like receptor signaling pathway
109105487
04622 RIG-I-like receptor signaling pathway
109105487
04623 Cytosolic DNA-sensing pathway
109105487
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109105487
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccar04052
]
109105487
Cytokines and neuropeptides [BR:
ccar04052
]
Cytokines
Interferons
109105487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
ApoL
DOCK_C-D_N
DUF745
EAD4
DUF4446
STX6_10_61_N
DUF2115
Motif
Other DBs
NCBI-GeneID:
109105487
NCBI-ProteinID:
XP_042576710
Ensembl:
ENSCCRG00000022671
UniProt:
B3XZQ0
LinkDB
All DBs
Position
B3:31524077..31526371
Genome browser
AA seq
183 aa
AA seq
DB search
MNQTQMWTCIFVIFLTLQSQCSACRWLGRYGTVSADSLNLLREMSGQYPENVKMHFPGTL
YNLIDKAEVEDQVRFLVLTLDHIINLMDASEHMNSAKWNLKKVEYFLEDLQRQSSELKEC
VAQYQKPLQKESYEIRIKRHFRTLKKILKKEKYSAQAWEQIRRAVRSHLQRMDIIANNAK
KRV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaactcaaatgtggacgtgtatttttgtgatatttttaactctgcagagtcaa
tgctccgcttgcagatggctcggcagatatgggacggtgagcgccgattctctgaatctg
cttcgggaaatgagtggacaatatcctgagaatgtcaagatgcattttccggggaccctg
tacaacctgatagacaaagctgaggtggaggaccaggtgaggtttcttgtcttgaccttg
gatcatatcatcaatctcatggatgcctcagagcacatgaattcagctaaatggaaccta
aagaaagtggaatatttcctagaagacctgcaacggcagtcatctgagcttaaagaatgc
gtggcccaataccaaaagccattgcaaaaggagtcttacgagatcaggataaaaagacac
ttcaggactttaaagaagattttaaagaaagaaaaatatagtgctcaagcatgggaacag
atccggagagctgtgagaagccaccttcagaggatggacatcatcgcaaacaatgctaaa
aaaagagtttaa
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