KEGG   Cyprinus carpio (common carp): 109105778
Entry
109105778         CDS       T05134                                 
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109105778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109105778
   03036 Chromosome and associated proteins [BR:ccar03036]
    109105778
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109105778
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109105778
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_Gbeta Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_ACSF4 Beta-prop_Nup120_160 Beta-prop_SPT8 WDR90_beta-prop_4th ExoI_SH3 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 109105778
NCBI-ProteinID: XP_018974594
Ensembl: ENSCCRG00000023205
UniProt: A0A8C2DQB3
LinkDB
Position
B6:13323309..13339282
AA seq 369 aa
MSLFGTNTGFGSGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQT
IQIAQHEGPIRTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttattcgggacgaacacgggctttgggtctgggggaacaggtgtatttggcagc
accaccacagacagtcataatccaatgaaggatgttgaagtaacctcgccacccgatgac
agcataagctgcttggcgttcagtccccctacgatgcctgggaactttctcatcggaggc
tcgtgggccaatgacgtacggtgctgggaggttcaagataatggtcagactgtccctaaa
gcccagcagatgcacacaggcccagtgctggatgtgtgctggagtgatgatggcagtaaa
gtctttacagcctcctgtgacaaaactgccaagatgtgggatctgaacagcaatcagacc
attcagatagcacaacatgaaggcccaatcaggacaattcactggattaaagcaccaaac
tacagctgtgttatgactggcagctgggacaaaacactgaagttttgggatacacgttcc
cccaaccccatgatgtccctgcagatgccagagaggtgttactgtgcagatgtggtatat
cctatggccgttgtagccactgcagaacgtggtcttattgtttaccagctggaaaatcag
ccttcagagtttcgacgtatagagtcacctctgaagcatcagcaccgttgtgtggctatc
tttaaggacaagcagagtaaacctactggttttgcgctgggcagcatcgagggacgagtt
gccattcattacataaacccacctaacccagccaaggacaatttcacctttaagtgccac
aggtccaacggaaccaatactgccacaccccaagatatttatgctgtgaatgctatctcc
tttcaccctgtccatggcactctggcgacagtaggctctgatgggcgctttagtttctgg
gataaagatgcccgcactaagctgaagacctctgaacaattagatcaaccaataacagct
tgttgcttcaataacaatggaaacatttttgcctatgcttccagctatgactggtctaag
ggacatgaatattacaatccccagaaaaagaattacatcttcttgaggaatgcagctgag
gaactgaagcctcggaacaagaaatggtga

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