Cyprinus carpio (common carp): 109106087
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Entry
109106087 CDS
T05134
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109106087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109106087
Spliceosome [BR:
ccar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109106087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
109106087
NCBI-ProteinID:
XP_042628723
Ensembl:
ENSCCRG00000009069
ENSCCRG00000051591
UniProt:
A0A8C1LBT7
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All DBs
Position
A16:13078994..13083634
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AA seq
509 aa
AA seq
DB search
MSLADELLADLEEAGEEEDGLYPGGEGGESDGEPGENQADGGLEDIPEEMEVDYSATESV
TSIAKLRHSKPFAEIMDKIGHYVGNQRKNSEVSGPVEADPEYRLIVAANNLTVEIDNELN
IIHKFVRDKYSKRFPELESLVPNSLDYIRTVKELGNSLEKCKNNETLQQILTNATIMVVS
VTASTTQGTMLGDDELQRLEEACDMALELNQSKHRIYEYVESKMSFIAPNLSIIVGASTA
AKIMGVAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDLR
RKAARLVSAKCTLAARVDSFHESTDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLD
GQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVR
QAQVNDSTKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAA
EKKVAEANQKYFSNMAEFLKVKREKEDKV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcagacgagttgcttgccgacttggaggaggcaggagaagaggaggacggg
ctgtatcccggtggagaagggggtgagagtgacggggaacccggggagaatcaagccgat
gggggtctggaggacataccggaggagatggaggtggattacagtgcgacggagagcgtc
acatccatagcaaaactaagacacagcaagccatttgctgaaatcatggataaaatcggt
cattatgttggaaatcaacgtaaaaattcagaagtgtctggacctgttgaagcagaccca
gagtacagactcattgtcgctgccaacaatctcacagtggaaattgacaatgaactcaat
atcattcacaagtttgtccgtgacaagtactccaaaaggtttcctgaactggagtctctg
gtgccaaattcactagactatatcagaactgttaaggagctgggtaacagtctagagaaa
tgcaaaaataatgagaccctccagcagatcctgactaatgctactatcatggtggtcagt
gtcacagcctcaaccacacaaggaacaatgcttggtgatgatgagcttcagcgattggag
gaggcatgtgacatggcccttgagctcaaccaatcaaaacacaggatctatgaatatgtg
gaatccaagatgtcatttattgctccaaatctttcaataattgtcggagcttcaactgct
gccaagattatgggtgttgctggggggctgactaacctgtccaagatgcctgcgtgtaat
ctgatgttgctgggagctcagcggaggacgctgtctggattcagcagcacatccctgctg
ccccacacaggctacatctaccactgtgacgtagtgcagtctctgcctccagatctgagg
agaaaagcagctcgtctggtttcagctaaatgcactctggctgcccgtgtggacagtttt
cacgagagtacagatggcaaggttggctatgacttgaaggaagagattgagcgaaagttt
gataaatggcaggagcccccaccagtcaagcaggtgaagcctcttccagctcccctagac
ggacagagaaagaagagaggaggaagaaggtatcgtaaaatgaaagagaggctgggactg
acagaaatcaggaaacatgccaacagaatgacatttgcagagatcgaggatgatgcttat
caggaggatctgggcttcagtcttggtcagctgggaaagtctggtagcggcagggtcaga
caagctcaggtcaacgactccaccaaggccagaatatccaaatccttacagcgaacactg
cagaagcagagcatgacgtacggtgggaagtccactgtcagagaccgatcttctggaacc
agctccagtgtggccttcactcctttacaggggctggagattgtgaacccacaggctgca
gagaagaaggtggctgaagccaatcagaagtatttttccaacatggctgagttcctcaag
gttaagcgcgagaaggaggataaagtgtga
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