Cyprinus carpio (common carp): 109106242
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Entry
109106242 CDS
T05134
Symbol
pdlim3a
Name
(RefSeq) PDZ and LIM domain protein 3a
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109106242 (pdlim3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109106242 (pdlim3a)
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109106242 (pdlim3a)
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Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
PDZ_Tricorn
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
109106242
NCBI-ProteinID:
XP_042622835
UniProt:
A0A8C1QQN7
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All DBs
Position
A1:3832390..3837487
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AA seq
310 aa
AA seq
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MPFTVVLDGPAPWGFRLIGGRDFSQPFTIAKISPGSKAARVNLSPGDIILAIDGVSAENM
MHSEAQTLIKDATHQLTLTVERPETKLWSPNVTEHSKIHPFKMNLEAERQEYTPIGTGHN
RRASPFVAAANLDDTRQVVSPTYNSPIGLYSSGNIQDALQGQLKGLIPSKPESPRKLSNI
EESDVYRMLQRSEDEDEPHEPRQSGSFKALQSFINSEGTRPLVTRKVCAPKTKPSAPAGN
LHKLPMCDKCGNGIVGTVVKVQDKFRHPDCFVCTECEENLKQRGYYFIDDELYCEIHAHA
RAKPPESPDL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcactgttgtgcttgatggacccgcgccgtggggctttcgacttattggagga
cgggacttcagccaaccctttaccattgccaaaatatcaccaggaagtaaagctgccaga
gtcaacctctctcctggagacatcatcttagcaatagatggagtttctgcagaaaacatg
atgcactcagaggcccagactctaatcaaggatgccacccatcagctcacacttactgtt
gagagaccagagactaagttgtggtcaccaaatgtcactgaacacagcaaaatccatcca
tttaaaatgaacctagaggcagagcgacaagagtacacaccaataggaacaggccataat
agaagggcttcaccctttgtggccgcagccaaccttgatgatacgcgtcaggtggtgagc
ccaacctacaactcccctattggcctttactcttcaggcaatatccaggacgccttacaa
ggacagctcaagggcctcatccctagcaaaccagaaagtcccaggaagcttagcaatata
gaggagtcagatgtatatcggatgctgcaaagaagtgaagatgaagatgagccccatgaa
ccacgacagtcgggatcctttaaagccctgcagagctttatcaacagtgagggtacacgt
ccattagtgacaaggaaagtctgtgcacccaagaccaagccatctgctccggcggggaac
ttgcacaagctaccgatgtgtgataagtgtggtaacggcatagttgggacggttgtgaag
gttcaggacaagtttcgtcatccggactgttttgtgtgcaccgaatgtgaggaaaatcta
aagcagagaggatactacttcatagatgatgagctatactgtgaaatccacgctcatgcc
cgggcaaaacctcctgagagtcccgacctttga
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