KEGG   Cyprinus carpio (common carp): 109106247
Entry
109106247         CDS       T05134                                 
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03013  Nucleocytoplasmic transport
ccar03015  mRNA surveillance pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109106247
  09122 Translation
   03013 Nucleocytoplasmic transport
    109106247
   03015 mRNA surveillance pathway
    109106247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109106247
   03041 Spliceosome [BR:ccar03041]
    109106247
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109106247
Spliceosome [BR:ccar03041]
 Complex C
  Other components
   EJC/TREX
    109106247
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 109106247
NCBI-ProteinID: XP_018975173
UniProt: A0A8C1HDE3
LinkDB
Position
32:complement(23917838..23922268)
AA seq 189 aa
MRAASRSLTHSQSGIMADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEG
ARSRAREDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDKFAEFGEIKNLHLN
LDRRTGYLKGYALVEYETYKEAQAAMEGLNGQELMGQPISVDWCFVRGPPKSKRRGGRRR
SRSPDRRRR
NT seq 570 nt   +upstreamnt  +downstreamnt
atgcgcgctgcctcacgctcgctcactcactcacaatcaggcatcatggcggacgtattg
gatcttcatgaagcgggaggtgaagactttcctatggacgaggatggcgacgagagcatt
cataagttaaaagaaaaagccaagaagaggaagggtcgtgggtttggatcagaggaggga
gcgagatctagagccagagaggactatgacacagtagaacaggatggagatgagcctgga
ccacagagatctgttgaaggatggattctgttcgtgactggtgtacatgaggaggcgacg
gaagaggatgtccatgacaagtttgcagaatttggagagatcaagaacttgcatctaaat
ttggacagaagaaccggttaccttaagggttatgcactggtggagtatgagacctacaaa
gaagcccaggcagcaatggaagggctgaatggccaggaacttatggggcaaccaatcagc
gttgactggtgctttgtaagaggaccccctaagagcaagaggaggggtggaagaagacgc
agcaggagccctgacagacggcgacgttga

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