Cyprinus carpio (common carp): 109106247
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Entry
109106247 CDS
T05134
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
ccar03015
mRNA surveillance pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109106247
09122 Translation
03013 Nucleocytoplasmic transport
109106247
03015 mRNA surveillance pathway
109106247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109106247
03041 Spliceosome [BR:
ccar03041
]
109106247
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109106247
Spliceosome [BR:
ccar03041
]
Complex C
Other components
EJC/TREX
109106247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
109106247
NCBI-ProteinID:
XP_018975173
UniProt:
A0A8C1HDE3
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Position
32:complement(23917838..23922268)
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AA seq
189 aa
AA seq
DB search
MRAASRSLTHSQSGIMADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEG
ARSRAREDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDKFAEFGEIKNLHLN
LDRRTGYLKGYALVEYETYKEAQAAMEGLNGQELMGQPISVDWCFVRGPPKSKRRGGRRR
SRSPDRRRR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgcctcacgctcgctcactcactcacaatcaggcatcatggcggacgtattg
gatcttcatgaagcgggaggtgaagactttcctatggacgaggatggcgacgagagcatt
cataagttaaaagaaaaagccaagaagaggaagggtcgtgggtttggatcagaggaggga
gcgagatctagagccagagaggactatgacacagtagaacaggatggagatgagcctgga
ccacagagatctgttgaaggatggattctgttcgtgactggtgtacatgaggaggcgacg
gaagaggatgtccatgacaagtttgcagaatttggagagatcaagaacttgcatctaaat
ttggacagaagaaccggttaccttaagggttatgcactggtggagtatgagacctacaaa
gaagcccaggcagcaatggaagggctgaatggccaggaacttatggggcaaccaatcagc
gttgactggtgctttgtaagaggaccccctaagagcaagaggaggggtggaagaagacgc
agcaggagccctgacagacggcgacgttga
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