Cyprinus carpio (common carp): 109106395
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Entry
109106395 CDS
T05134
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109106395
Enzymes [BR:
ccar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
109106395
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109106395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
109106395
NCBI-ProteinID:
XP_042628171
UniProt:
A0A9Q9YXF4
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All DBs
Position
A16:complement(6181156..6189692)
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AA seq
736 aa
AA seq
DB search
MGRKLDPTVKVKRGPGRKARKQKGAETELSKFLVDDDGPKKLSSRSRKRAIKRAQVTKEP
KQEEKSKKGFSDENSKWLKPTQRKRKIEQSEEDEDSDSQWEEEDDDDEEGFGKKEMEEEE
DDDDEDMVDDYGADEGDEQDSDGEELLPIERAARKQKKQIRKKPGSDDDEDEEEEDDDDE
EDEKDDLKEDEEEEEDTVQANFDETETFKLPAAADRAKEGLLQMDLQTIHQRIRDNVDVL
SHFSEKREEGKERSEYLSLLRSDLCTYYSYNEFLISKLMDIFPVSELIDFLEANEIQRPV
TIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLSGQYMLQG
ASSFLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDANADRLKSVVGNIH
RLGVTNAVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPGVKTGKDEADVLRSAHL
QKELILSAIDSVNADSPTGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLDFGKEG
FIRFKERRFHPSLKLSRRFYPHSQNMDGFFVAKLKKLSNTIPTAPRETEDEVESTKTETA
ASSEQIQKPESKQQKPASTPEKSNMGKKQKLKPEKSETPIITKKAGVKSENKKSDGPKKA
KIAKLDGETSKKSAKPNKKQKVKELNGDSTKEVVIEKKKGSQFEKNNKTKRKNLLKKNKN
RMGKNKFKKLKNMVGQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccgttaaggtgaaaagaggacctggacgtaaggccaga
aaacagaagggagcagaaacagagctgtccaagtttttggttgatgatgatgggccaaaa
aaactttcaagcagatcaagaaaacgagctataaaaagagctcaagtgactaaagaaccc
aaacaagaggaaaagtctaaaaaaggattctcggatgagaacagtaaatggctaaaacca
acacagaggaagagaaagattgaacaatctgaagaagatgaggacagtgacagccaatgg
gaagaagaagatgatgatgatgaagagggttttggtaaaaaggaaatggaggaggaggag
gatgatgatgatgaagatatggttgatgactatggtgctgatgaaggggatgaacaagac
agtgatggagaagagcttctgccaattgagagagctgcaagaaaacagaaaaaacaaata
agaaagaaaccagggagtgatgacgatgaggatgaagaagaggaagatgatgatgatgaa
gaagatgaaaaggatgatttaaaggaagatgaggaggaggaagaggatactgtacaggca
aattttgacgaaactgaaacattcaaactcccggctgcagcggatagagcgaaggagggt
cttttacagatggacctacagaccatccatcagaggatcagagataatgtggatgtgctg
tctcacttcagtgagaagagagaagagggtaaagagagatcggagtatctctctctgctg
cgctctgacctctgcacctactacagctacaacgagttcctcatcagcaagctcatggac
attttccctgtctctgagctgattgattttcttgaggccaatgaaattcagaggccggtc
accatcagaaccaacaccctgaaaaccaggaggagagacttggctcaggctctgattaac
agaggagtgaacctggatccactggggaaatggtccaaagtggggctggttatctatgac
tcttctgttcccattggagcaactccagaatatttgtcaggccagtacatgttgcaaggt
gcgtcatcgtttctgcctgtaatggcgctttcgccccaggagggggagtcagtgctagac
atgagcgcggctccaggaggcaagaccacatatatggctcagctcatgaggaacacaggc
atgattgtggctaatgacgcaaatgcagacaggctgaagagcgtggtgggaaacatccat
cgtctcggtgtcactaacgctgtcatctgcaactacgacggcagacagttccccaaggtg
atgggaggtttcgatcgagtgcttttagatgctccttgctcgggtacaggagtcatctcc
aaagatccaggagtaaaaactggcaaggatgaggctgatgttcttcgctcggctcacctg
cagaaagagctcatcctgtctgctatcgactcagtcaatgctgattctccaactggcgga
taccttgtttactgcacatgctctattatggtagaggagaatgagtgggtggtggactat
gctttaaagaagagaaatgtgaagctggtccccactggactagactttggcaaggaggga
ttcatcagattcaaagaaagacgtttccatccctctctcaaactgtctcgccgattctac
cctcactcccaaaacatggatggattttttgtggccaagctaaagaagctgtctaacacc
atccccaccgcaccaagagaaacagaagatgaagtcgaatctacaaaaacggagaccgca
gcctcatcggagcagatccagaaaccagaatctaagcaacagaagcccgcttcaactcca
gagaaaagcaacatgggcaagaagcagaaattaaaaccagaaaaatctgagacgcccatc
atcacgaagaaagctggagtgaaatctgagaataaaaaatctgatggtcccaaaaaggcc
aaaattgctaagttggatggtgaaacatccaaaaagagtgcgaaacctaacaaaaagcag
aaggtgaaggaactgaatggagattcaacaaaagaggtagtgattgagaagaaaaaggga
agccagtttgagaagaacaacaaaacgaaaaggaagaacttgttgaagaagaataaaaac
agaatggggaaaaacaagtttaagaagttaaaaaatatggttggacagtga
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