Cyprinus carpio (common carp): 109106398
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Entry
109106398 CDS
T05134
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109106398
Enzymes [BR:
ccar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
109106398
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109106398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
109106398
NCBI-ProteinID:
XP_042596688
UniProt:
A0A9Q9X7I9
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All DBs
Position
B16:complement(11655260..11662009)
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AA seq
739 aa
AA seq
DB search
MGRKLDPTIKVKRGPGRKARKQKGAETELTKFLVEGKTVVGRKKLSSRARKRAVKRAQVT
KEPKQEEKPKKGFSDENNKWLKPAQRKRKIEQSEEAEDSDSQWEDDDDDNEEGFINKQME
EEDDDDEDMVDDYGADEGDDQDSDGEELLPIEKAARKQKKQTSVKPESDDDDDEEEEEED
DDEEKEDLKEDEDEEDTVQANFDETEQFKLPGAADRAKEGLLQMDLQTIHQRIRDNVDVL
SHFTEKREEGKERSEYLSLLRSDLCTYYSYNEFLISKLMDLFPLSELIDFLEANEIQRPV
TIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLSGQYMLQG
ASSFLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDANADRLKSVVGNIH
RLGVTNAVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPGVKTSKDEADILRSAHL
QKELILSAIDSVNADSPTGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLDFGNEG
FIRFKERRFHPSLKLSRRFYPHSQNMDGFFVAKLKKLSNTIPTAPKETEDEVESTKTETA
ASSEQIQKPESKQRKPSSTPEKSNMGKKQKLKQKKSEPPIIRKKAGVKSENKKSDGPKKA
KIPKLDGEASKKSKKPDIKQKVKELNGDSTKEEKKEKSQLEKKKNKMERKKLLKKNINRM
GKNKFRKLKNVLGQQESGQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaaagttggaccccaccatcaaggtgaaaagagggcctggacgtaaggccagg
aaacagaagggagcagaaactgagctgaccaagtttttggttgaaggtaaaacagtcgtg
ggcagaaagaaactttcaagcagagcgagaaaacgagctgtaaaaagagctcaagtaact
aaagaacccaaacaagaggaaaagcctaagaaaggattctcagatgagaataataaatgg
ctaaaaccagcacagaggaagcgaaagattgaacaatctgaagaagctgaggacagtgac
agccagtgggaagatgatgatgatgataatgaagagggctttattaataagcaaatggag
gaagaggatgatgacgatgaagatatggttgatgactatggtgctgatgaaggggatgat
caagacagcgatggagaagagcttctgccaattgagaaagctgcaagaaaacagaaaaaa
caaaccagcgtgaaaccagagagtgatgatgatgatgatgaggaggaggaggaggaagat
gatgatgaggaaaaggaagatttaaaggaagatgaggatgaagaggatactgtacaggca
aattttgatgaaactgaacaattcaaactcccaggtgcagcagatagagcgaaggagggt
cttttacagatggacctacagaccatccatcagaggatcagagataatgtggatgtgctg
tctcacttcactgagaagagagaagagggcaaggagcgatcggagtatctctctctgctg
cgctctgacctctgcacctactacagctacaacgagttcctcatcagcaaactcatggac
ctcttcccgctctctgagctgattgattttcttgaggccaatgaaattcagaggccggtc
accatcagaaccaacaccctgaaaaccaggaggagagacttggctcaggctctgattaac
agaggagtgaacctggatccattggggaaatggtctaaagtgggcctggttatatatgac
tcttctgttcccataggagcaactcctgaatatttgtcaggccagtacatgttgcaaggt
gcatcatcgtttctgcctgtaatggcgctttcgccccaggagggggagtcggtgctagac
atgagcgccgctccaggaggcaagaccacatatatggctcagctcatgaggaacaccggc
atgattgtggctaatgacgcaaatgcagacagactgaagagcgtggtgggaaacatccat
cgtctcggtgtcactaacgctgtcatctgcaactatgacggcagacagttccccaaggtg
atgggaggtttcgatagagtgcttttagatgctccttgctcaggtacaggagttatctct
aaagatccaggagtaaaaaccagcaaggatgaagctgatattcttcgctcggctcacctg
cagaaggagctcatcctgtctgctatcgactctgtcaatgctgattctccaactggcgga
taccttgtttactgcacatgctctattatggtagaggagaatgagtgggtggtagactac
gctttgaagaagagaaatgtaaagctggtccccactggactggactttggcaacgaggga
ttcatcagattcaaagaaagacgtttccatccctctctcaaactctctcgccggttctac
cctcactcccaaaacatggatggattttttgtggccaagctaaagaagctgtctaacacc
atccccactgccccaaaagaaacagaagatgaagtagaatctacaaaaacggagaccgca
gcctcatccgagcagatccagaaaccagaatctaagcaacggaagccctcttcaactcca
gagaaaagcaacatgggcaagaagcagaaattaaaacagaagaagtctgagccgcccatc
atcaggaagaaagccggagtgaaatctgagaataaaaaatctgatggtcccaaaaaggcc
aaaattcctaagttggatggtgaagcatccaaaaagagcaagaaacctgacataaagcag
aaggtaaaggaactgaacggagattcaacaaaagaggagaagaaagagaaaagccagttg
gagaagaagaaaaacaaaatggaaaggaagaaactgttgaagaagaatataaacagaatg
gggaaaaacaagttcaggaagttaaaaaatgtgcttggacagcaagaaagtggacagtga
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