Cyprinus carpio (common carp): 109106416
Help
Entry
109106416 CDS
T05134
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109106416 (ddx17)
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109106416 (ddx17)
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109106416 (ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109106416
NCBI-ProteinID:
XP_042614023
UniProt:
A0A8C1JD75
LinkDB
All DBs
Position
A6:12135433..12152824
Genome browser
AA seq
670 aa
AA seq
DB search
MIKVQEMRGSSSYGDRDRDRGRDRGPRFGSSRVAPPPPKKFGNPGDRLRKKKWDLDQLPK
FEKNFYSEHPEVHHMSQYDVEEYRRKKEITVRGSGYPKPITNFHQAQFPQYVMDVLLQQN
FKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL
APTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLE
VGKTNLRRCTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKEVRQLAEDF
LHDYVQINIGALELSANHNILQIVDVCMENEKDLKLIQLMEEIMAEKENKTIIFVETKKR
CDELTGRMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFV
INYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQ
LVDTGRGGGGGGRMRYRANNSTSNNPNLMYQDECDRRMHSVSGSNKGSRSNNLSRDGRSG
GSSRGDHMSSSYRDRSRDGRNNYNSGPSYNSGGGDQFQSCVGGGGGQYGSRGGGSHPGGG
GSGGAGGQDQAGPPQGLFGAPPPTPQPGPSPQPLMAQQFPPPPQPIMGFMGTGPYPFASP
PPPLPPPPRK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggtacaagagatgagaggcagctcctcatatggagaccgagacagagatcga
ggacgggacagggggcctcgctttggatccagtcgagttgccccacctccacctaagaag
tttgggaatccaggagatcggctgaggaagaagaaatgggacctggaccagctacccaag
tttgagaagaacttttacagtgaacacccagaggttcatcacatgagtcagtatgatgtg
gaagaatatcgccggaagaaagagatcacagtcagaggctccggctatccaaagcccatc
accaacttccatcaagctcaattccctcaatatgtgatggacgtgttgctgcagcagaac
tttaaggagcccactgctatccaggctcaaggttttcctttggctctcagtggcagggac
atggtgggcattgctcagaccggctccggaaaaacactggcttatctgctgcctgccata
gtgcatattaaccatcagccctacctggagagaggggatgggcccatttgtcttgtgttg
gcaccgacgcgtgaattagcccagcaggtgcagcaagtggcttatgactatggcaaatca
tctcggatcaagagtacctgtgtgtatggtggagcccctaagggtccacagatcagagat
ttagaaagaggtgttgaaatctgcattgccacacctggccgtctgatcgatttcctggag
gtaggaaaaaccaacctgcggcgttgcacctacctagtgctggatgaggctgatcgtatg
ttggacatgggatttgaaccccaaatccgcaaaattcttgaccaaattagacctgacaga
cagactctcatgtggagtgctacctggcctaaagaagttcgtcagctggctgaagatttc
ctccatgactatgtccaaatcaatataggagctctagaactgagcgcaaaccacaacatc
ctgcagatagtggatgtctgcatggagaatgaaaaagacttgaagctgattcagctgatg
gaggaaatcatggctgaaaaggagaacaaaaccatcatctttgtcgagacaaagaaacgt
tgtgatgaacttactgggaggatgcgaagagatgggtggcctgcaatgtgtattcatggt
gacaagagccaaccagagagggactgggtactatcagagtttcgcagtggaaaagctcca
attttgattgctactgacgttgcctcacggggtctggatgtggaggatgttaaatttgtc
atcaactatgattatccaaactcttctgaggattatgttcatcgcattgggcgcacagcc
cgcagcaccaacaaaggtacagcttataccttcttcacacctgggaaccttcggcaggct
cgtgatctggtccgggttcttgaggaggctagacaggccatcaaccccaaactactgcag
ctggtggacacaggccgtgggggagggggaggtggaaggatgcgttatcgtgccaacaac
tcaacctcaaataaccccaacctgatgtaccaggatgaatgcgatcgccgcatgcactct
gtatccggaagtaacaagggcagccgcagcaacaacttgagccgtgatggaaggtcaggt
gggagcagccgtggcgaccatatgtcctcttcttacagagaccgcagcagggatggacga
aacaactacaactcaggaccctcctacaacagtggaggaggtgaccaattccagagctgt
gtgggcggaggaggggggcagtatggctcccgagggggaggctcacatccaggtggtggt
ggtagtgggggtgcaggagggcaagatcaggctggacctccccaaggtctgtttggagca
cctccaccaactcctcagcctgggccaagtccgcagccactcatggcacagcagtttcct
cctccaccacagcctatcatggggttcatgggaactgggccatacccatttgcctcacca
ccaccaccccttcctccccctcctagaaagtag
DBGET
integrated database retrieval system
