Cyprinus carpio (common carp): 109106437
Help
Entry
109106437 CDS
T05134
Symbol
abcb5
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109106437 (abcb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccar02000
]
109106437 (abcb5)
Transporters [BR:
ccar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
109106437 (abcb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
Rad17
AAA_7
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
109106437
NCBI-ProteinID:
XP_042596742
UniProt:
A0A9Q9X7M3
LinkDB
All DBs
Position
B16:complement(12563350..12580569)
Genome browser
AA seq
1340 aa
AA seq
DB search
MKEEPSVQSTDPPPYLQEVIPEGFVNLAYTQDEKPQEDKPEETSAKSKGKGKKEKKSKKK
TEPVKTVGFFQLFRYATCPEVLLMLIGLLCAAAHGVALPLMCVVFGEMTDSFVLSGHTAN
LTGNFSGNFTYALTNSSVCLAGSPEIGIEDKMSKHAYYFVAIGAAVLLLGTFQVMLFLLT
AAKQTKRIREKYFHAILHQQMSWFDTHQIGELNIRLTDDINTINDGLGDKICVFVQFFCT
FISGFIIGFIYGWKLTLVILAVSPLLAGSAAVWSKILATLTSKELTAYAKAGAVAEEILV
AIRTVVAFNGQKKAVEKYEKNLIEAKNFGVKKAITTNVSMGLTQFIIFGTYALAFWYGTK
LSVDEPENYSIGRVIIVFFSVMIGSFSLGQGAPNLESIAKARGAAYEVYKTIDMPRPIDS
SSNEGHKPDHVIGDIEFKNIHFSYPSRKDVKILQGMSLKIPHGKTIALVGASGWGMWEKI
KILDCLYVLCSXLVTLDGHDIRSLNVRWLRENMGIVSQEPVLFGTTIAENIRYGREDATD
EDIERAIKEANAYDFISKLPDKLNTMVGERGAQLSGGQKQRIAIARALVKNPKILLLDEA
TSALDTQSESIVQAALDKARAGRTTIVIAHRLSTIRSADIIAGFSEGKVVEQGSHGELMA
KKGVYYSLVMQQTCGRPNDDDLDANEDDTQDASEGETCEESSETETPAEGMEMQMESGTL
RRSLRRGSERRSSRKKSSKKKSKKSKQDKKEKEKAPEIPFTKILALNKPEWPYLLVGTLA
SLVGGAVYPCVAILFAKIIGVFAEVDPDVKRQKTMMFSLFFLLTGAVAFITYFFQGFMFG
KSGELLTMRLRRQAFNAMMRQEIAWFDDNNNAVGVLTTKLATDASLVKGAAGARLGLATN
TICALIIAVVVAFIHSWQLTLLILACVPFLTGANFIQMRAMAGHASKDQSALEMSGKIST
ETVENFRTVVALTREDVFFHKFIDSLSKPYQSSLCKAPIYGITFAIAQAIPYLVNAAIFR
FGAWLIAHCLTEYENVFLVFSVIVFAAMNIGQSSSFAPDFAKAKAAAGRILLLLEKKPAI
DIYDESGQRPTNFSGNIEFRDVQFSYPTRQNVKVLQGLNVSVCQGQTLALVGSSGCGKST
TIQLLERFYDPAAGQVFVDGNDSRSLNLAWLRTQMGLVSQEPILFDCTIAENIQYGDNSR
VVSQEEIEEAAKKANIHNFILGLPEKYNTRVGDKGAQLSGGQKQRIAIARALVRNPKLLL
LDEATSALDTESEKIVQKALDDARHGRTCIVIAHRLSTIYNADIIVVVQNGKVTEQGTHA
QLMAKQGAYYALVNAQVSAH
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagagccgagtgttcagtcgacagaccctcctccttacttgcaagaggtgatc
cccgagggctttgtcaacctagcctacacccaggatgagaaacctcaggaagacaaacca
gaggagacctctgcgaaatcaaagggcaaaggcaaaaaggaaaaaaagtcaaaaaagaag
acagagccagtgaaaacagttgggttttttcagctgtttcgttatgccacctgtccggag
gtgctgcttatgctgattggcctgctgtgtgcagctgcccatggcgttgcgttgcctctc
atgtgcgtggtttttggagaaatgaccgacagctttgttttgagtgggcatacggctaat
ctgacaggcaacttcagcggaaacttcacctacgccctcacgaactcttcagtgtgtttg
gctggttctcctgaaataggcattgaagataaaatgtcaaaacacgcttattacttcgtt
gcgatcggggctgcggtgctgctgctgggaacgttccaggtaatgcttttcctgctaact
gctgcgaagcaaacgaagaggatccgggagaagtactttcatgccatccttcaccagcag
atgtcatggtttgacacgcatcagatcggagagctgaacataagacttactgatgacata
aacacaatcaacgatggcctcggggacaaaatctgtgtgtttgtccagttcttctgcaca
tttatttctggtttcatcattggttttatctacggctggaagctgacgctggtcattctt
gctgtcagtcccctgctggcaggatcagcagctgtttggtctaaaattcttgctactctg
accagtaaggagcttacagcatatgctaaagcaggagcagtagctgaagagattctagtc
gctatcaggactgttgtggcatttaatggacagaaaaaagcagtggaaaagtatgagaag
aacttgatagaagcgaagaattttggagtaaagaaagccattaccactaatgtgtccatg
ggtttgacacagttcattatatttggcacttacgcgctggcgttttggtatgggacaaaa
ctctctgtggacgagccagagaattactcaattggacgggtcatcattgttttcttctct
gtgatgattggctcattctctttgggtcagggagctccaaacctggagagcatcgctaaa
gcccgaggtgctgcttatgaggtctacaaaacaattgatatgcctcgtcctattgacagc
agttcaaatgaaggacacaaaccagatcatgtgataggagatattgaattcaagaacatc
cacttcagctatccctccagaaaagatgtgaagattctgcagggaatgagtctgaaaatc
cctcatggaaagaccattgctttggttggagccagtggctgggggatgtgggaaaagatt
aagattttggattgtttatatgttctttgttcatgattggtgactcttgatggtcatgat
atccgctctctgaatgtgcgctggctgagggagaacatgggtatcgtgagtcaggagcct
gttctttttggaaccactattgctgagaacatacgctacggccgtgaagacgccactgat
gaagacattgaacgagccattaaagaggccaatgcctacgatttcatttccaaactacca
gataagctgaacactatggttggagagagaggggctcagctgagcggaggccagaaacag
aggatcgctattgctcgagctctcgtcaaaaaccccaaaatccttctgctggatgaggcc
acatcagccctggacacacagagcgagtccattgttcaggcagctttggacaaggccaga
gcaggacgtacaaccattgtgattgcacaccgcctgtcaactattcgctcagcagatata
attgctggcttcagtgaaggcaaagtggtggaacagggatctcacggagaactcatggcc
aagaaaggagtgtattattctcttgtaatgcagcagacctgtgggagaccaaatgatgat
gatcttgatgccaatgaagatgatactcaggatgcttctgagggagaaacctgtgaggaa
tcttctgaaacagaaactcctgcggaaggaatggaaatgcaaatggagagtggaacctta
agacgaagcttaagacgtggcagtgagagacgttcctccagaaagaagtcctcaaagaag
aagagcaagaaatccaaacaagacaaaaaggaaaaagaaaaggctccagaaatacctttc
actaaaattctggctctgaacaagccagaatggccgtacctgctggtgggcacgctggcc
agccttgtgggtggagctgtttatccctgtgtggctattctatttgccaaaatcattggt
gtgtttgcagaagttgaccctgatgtaaagcgacagaagaccatgatgttctcactgttc
tttctactaacgggagcagtggcctttatcacatatttcttccagggcttcatgtttggt
aaatctggggagctcctaaccatgaggttgagaagacaggctttcaatgccatgatgaga
caggagattgcttggtttgatgacaacaacaatgcagtgggagtcctgaccactaaatta
gccacagatgcgtctctggttaaaggggcagcaggagccagattaggtctagccacaaac
actatctgtgctcttatcatcgctgtcgttgtggccttcatccatagctggcagctcacc
ttgcttatccttgcctgtgtccccttcctcacgggggcaaatttcatccagatgagagcc
atggcaggacatgcatccaaagatcagagtgcactggagatgtctggcaagatatccaca
gaaacagttgagaacttcagaacagttgttgcattaacccgcgaagacgtcttcttccac
aagtttattgacagcctgagcaagccataccaatctagtttgtgtaaagcacccatctac
ggaatcacctttgctattgcccaagccattccttacctggtcaatgccgcaatcttccgc
ttcggagcctggcttattgcacactgcttaacagaatatgaaaatgttttcctagtattt
tctgtgattgtctttgctgcaatgaacattggtcagtcctcatcattcgcccctgacttt
gccaaagccaaggcagcagctgggaggatcttactgctgctggaaaagaaaccagccatc
gatatctatgacgagtctggacaacgaccaacaaatttttcagggaatattgaattccga
gatgtgcagttctcctatccaacgcgtcagaatgtgaaagtcctgcagggcctgaatgtg
tctgtgtgtcagggccagaccctggccctggtgggcagcagtggttgtggtaagagcacc
accattcagcttctggagcgtttctacgaccctgcggcaggccaagtgtttgtggatggg
aacgacagcagaagtctgaacctggcatggctgcgcacgcagatggggctggtgtctcag
gagcccatcctgtttgattgcaccattgctgagaacattcagtatggagacaacagccgc
gtcgtcagccaggaggagatcgaggaagctgcgaagaaggccaacattcataattttatc
cttggccttccagagaaatacaacactcgagttggagataaaggcgctcagctgtctgga
ggacagaagcaaaggatagccatcgctcgagctctggtccgcaatcccaaacttctgctg
ctggatgaggccacgtctgcactcgacacagagagcgagaagattgtgcagaaggccctt
gatgacgctcggcatggccgcacatgtatcgtcattgcccatcgcttgtccactatttat
aatgctgacatcatcgtggttgttcagaacggcaaggtgactgagcagggaacgcatgct
caactcatggccaaacaaggggcctactatgctctagtgaatgcacaagtgtctgctcac
taa
DBGET
integrated database retrieval system
