Cyprinus carpio (common carp): 109106447
Help
Entry
109106447 CDS
T05134
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04810
Regulation of actin cytoskeleton
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109106447 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109106447 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109106447 (itga10)
04810 Regulation of actin cytoskeleton
109106447 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109106447 (itga10)
Cell adhesion molecules [BR:
ccar04515
]
Integrins
Integrin alpha subunits
109106447 (itga10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
ITGAX-like_Ig_3
vWA_SIBA-E
LapA_dom
Motif
Other DBs
NCBI-GeneID:
109106447
NCBI-ProteinID:
XP_042596628
UniProt:
A0A9Q9X7E8
LinkDB
All DBs
Position
B16:complement(10634362..10666015)
Genome browser
AA seq
1171 aa
AA seq
DB search
MEIHKYLLLLKITVLLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHENNGEKSILVGA
PWDGPQNNRKGDIYKCIVGDETNSNCSKMNLGENAFQNVSRNLKNSHLGMTLTPAAPDGF
LACAPLWSQECGTSLFSTGICASVTNDMEPKDIIAPTAQRCTTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTQDVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSPDRGAREGATKVMIVVTDGESHDGEDLPDSLAECEKRNITRYA
IAVLGHYIRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKAGQLKPSREAFEKEFP
LELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFDLTPEGDVIITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYVYCLDGDGFAPNGTLHSQ
KKAQDARFGYAMAVAPDLNHDGYADLLVGAPLEDDHQGALYIYHGDEYYIIPQYKQRIPG
SSLSSGLQYFGRSLSALLDLDGDELLDLAVGAQGTAVLLKSRSIVQINVSLSFQPHSINV
IQKNCHRAGRDSACLNATVCFLALSRSPGSYGTSFDMQMGAMLDDRKILARALFDYNSQR
QTLMGVTVRVGQTICYTLPFHVFDTADYIRPISFTLRFKINDTESGPVLDEGWPTTFKKS
IPFFKDCGEDDVCVTDLVLQAHMDISGTRQQPYVIRSPRRRLAVEVQLQNRLENAYNTSL
TLHYSKNLHFSSLSIREDAQFKIECTALSSNSHSCNVSYPVFRSQSKVNFMLEFEFSCTS
LISKVQMKLVASSDSVESEGTLSDNNVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTVSE
GTGPEFYTHFRVQNLGCYAVSNLELTVNLPAVASGDRVFATVVDAFSYNSSGVNCSIVGD
LSKLKSSQRDVRPLHPEDMKKVELLNCTSSWCVEVVCHIQQLLKGQTALIRLTRRIHDNF
FRQAKFKAVTIVGSYQLSARESNLITMGNAALLRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFMLWKLGFFTRKQRKDEDENDDN
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagattcacaagtacctgctgctgttgaagatcactgttcttctcaaagggctgtgt
gagtgttttaatattgatgtaaagaggccacggatcttcagtggacctgaagatgctcta
ttcggcttctctgtgttacagcatgagaacaatggagagaaatcgattctggttggtgct
ccatgggatggaccacaaaataacaggaagggggatatttataagtgcattgtgggagat
gagacaaattccaattgttcaaaaatgaacctaggtgaaaatgcatttcagaacgtgtct
cgaaatcttaaaaactctcatctggggatgacgctaacccctgctgctccagatggcttc
ctggcctgcgctccactatggtcccaggaatgtggtacatctctgttcagcacaggaatc
tgtgcgtctgtcaccaatgacatggagcccaaggacatcattgcacccactgcccagaga
tgcaccacatacatggatatagtgattgttttagatggttctaatagtatctacccttgg
tacgaagtgcagaactttcttagcaacattctcagcaagttccacataagccctgaacaa
atgcaggtaggtgtcctgcagtacggcgagatctcagtccatgagtggtctctcagggac
tatcagacaacacaggatgtggttgaagccgccaagaacatcagtcgtcaagagggacgg
gagacccgcaccgcatacgccatccaaatggcctgcactgaggcctttagtccagacaga
ggagcgagggaaggggccactaaagtgatgatagtcgtgacagatggagagtcccatgat
ggtgaagaccttcctgattccttggctgaatgtgagaaacgtaacatcaccagatacgcc
atcgctgtattgggtcactacatccgcagacagcaagatccagagacctttatcaatgag
attaagtacattgccagtgatcccgatgagaaatacttcttcaatgtaacggatgaggct
gctctaaatgacattgtagatgcattgggtgatcgcatttttagtctagaggggactctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcgacacacatt
ttagatgatggcatcttgtttggcatggtgggtgcatatgactgggagggaggcgtcctg
aaagagagcaaagcagggcagctcaagccctcaagagaggccttcgagaaagagttccca
ttggagctgaagaatcacgcagcctacttaggttacacagtgtcatcagtgattgtaggt
gactggaggaggttgtatgttgctggtgcacctagattcaagcacaaaggaaaggtcata
ctgtttgatctcacccctgaaggcgatgtcataatcacacaagccctaaatggagaacag
attggctcatattttggcagtgaggtgtgcgtggtggatgtggatcaggacggaataaca
gacatcctgctcatagctgctcccatgttcctgggagcaggaaacaaagaaacaggcaaa
gtctatgtctactgtctggatggggatggttttgctcctaatggtacactacattctcag
aagaaagcacaggatgcacgctttggttatgctatggctgtagcccctgaccttaaccac
gacggatacgctgacctgcttgtgggagctccgctagaggatgaccaccagggagctctt
tacatctaccacggcgacgaatactacatcatacctcagtataaacaacgtatcccaggc
tcctctctctcttcagggctgcagtattttggccgtagcctgagcgctctgctggatctg
gatggggatgagttactggatcttgctgtgggagcacagggcactgccgtcctactgaag
tcacgcagtatagtgcagatcaatgtcagcctgtccttccagccacactccataaatgtg
atacagaagaactgccacagggctggacgagactccgcatgccttaacgccacagtttgc
tttctggccctgtctcgctctcctggctcttatggcacatcttttgatatgcagatgggg
gccatgctggatgacagaaagatcttggctcgtgctctgtttgactacaactcccagcgg
cagaccctaatgggcgtcactgttcgtgtagggcagaccatatgctacacgctaccattt
catgtctttgatacagctgattacatccgaccaatcagcttcactttgcgcttcaaaatc
aatgacacagagagcggcccggtactagatgagggctggccaacaacattcaagaagtct
atcccattcttcaaagactgtggggaggatgatgtgtgtgtaactgatcttgttttacag
gcccatatggacatttctggaacaaggcagcaaccgtatgttatacgcagccctcggcga
cgacttgcagtagaagtgcagctacaaaaccggctagaaaacgcctataacactagcctc
acccttcattactctaaaaacctgcacttcagcagtctgagtatacgggaagacgcccag
tttaagattgaatgtacggctctaagctcaaacagtcactcctgtaatgtcagttaccca
gtgttccgctctcagtcgaaggtgaacttcatgttggaatttgagttcagttgtacgtct
cttatcagtaaggtccagatgaagcttgttgcttcaagtgacagtgtggagagtgaaggc
acactttcggacaacaatgtacagttacagagtattgtacagtatgaaccagatctcttc
atcacaagtgactccaacctaaaccgctatgaggtccacccaaccagaaccgtgtctgag
gggacaggacctgagttctacacacatttcagggtgcagaatctgggctgttatgccgtc
agtaatctggagctgactgtcaatttgcccgccgtggcttcaggagacagagttttcgcg
acggtggttgatgctttctcttataattcttcaggtgtgaactgcagtatagtgggtgat
ctatcaaagttaaagtccagccagagagatgtgcgtccacttcacccagaagacatgaag
aaagttgaactattgaactgcacttcctcatggtgtgtggaggttgtgtgtcacatccaa
cagctactgaaaggacagacagccttgatccgcctcaccaggaggatacatgacaacttc
ttcagacaggccaagtttaaagcagtgacaatagtgggctcttaccagctgtctgctcgg
gagtccaatctgattacaatgggaaatgctgccctcttgagggagaccgttttggaagtg
ctgaaggggcgttcgattccaatctctctctggattctgattggcagcatcattggaggc
ctgctgcttcttgcactcttagtattcatgctttggaagctggggtttttcacaaggaaa
cagaggaaggatgaggatgagaacgatgacaactga
DBGET
integrated database retrieval system