KEGG   Cyprinus carpio (common carp): 109106850
Entry
109106850         CDS       T05134                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03013  Nucleocytoplasmic transport
ccar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109106850
   03015 mRNA surveillance pathway
    109106850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109106850
   03041 Spliceosome [BR:ccar03041]
    109106850
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109106850
Spliceosome [BR:ccar03041]
 Complex C
  Other components
   EJC/TREX
    109106850
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA RSB_motif FlaC_arch
Other DBs
NCBI-GeneID: 109106850
NCBI-ProteinID: XP_042599278
UniProt: A0A8C1G9G2
LinkDB
Position
B17:6202716..6208079
AA seq 663 aa
MAVVVRSLQDQLEKAKESLKSVDENIRKLTGRDPSELRPGQNRRHTITGPGGGRGRGINL
LRRGLSDSGGGPPAKQRDIAGALLRLAGDERARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESTVSTDRLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNSKLIKFIRTKTKP
PIFYLPGRMCSATQKLLEESQKKLNGVFDERREAFAEQLNKMEARPRRQSQRTGDREMED
GRRAEETKKEDQEEGKVGVGRTGKRHNVEMEDEEEDVVEEEGEESSEIREQEGDQEQSEK
DKHEESELKAEEEDEDEDEEDVGTSEVKEEGEEQMEVAEVVREDEAQSKLQVESPEATVE
EVGNVQKEEEQETENENQQEIVTDSQQTPESHMEIQPEECKEPQLDVPTPSVMEHDTKQD
DTAPETQQTLLEPDPEIPQEQSQEPSVQPQEAKADTKEASEETDEARGRAKVRAKRSKSR
SSTSSSSSSSSSSTSGSSSSSSGSSSSSSGSSSSSSSSRSRSHGRERDGRDHKRRRRPSD
RERRKSGGERGHKSSKGSGRESKGSKDKNSKPDKKRTSTEGSRSARRSSRSERDRKSDRK
DRR
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggcggtggtcgtgcgaagtttgcaagaccagctggaaaaagccaaggaaagcttaaag
agcgtggacgaaaatattcgaaaactaaccggcagagatccgagcgaattaagaccgggt
caaaacaggagacataccatcacaggcccaggtggaggtagggggcgtggaatcaatttg
ctgaggcgtggactctcagatagtggtggaggacccccagccaaacagagagacatcgca
ggggcactcttgaggctggcaggggatgagcgagccaggagagattcacgccatgacagc
gacgctgaggatgatgacgatgtcaaaaaaccagcgttgcagtcatctgtggttgctacc
tccaaagaacgtacgcgccgagatcttattcaagatcagacaatggatgagagaggaaag
cagagaaaccggcgcatgtttggcctattgatgggaacattgcaaaagtttaagcaggag
tctactgtgtccacagaccggttaaaaagacgccaagaaattgagcagaaattggaagtg
caggcagaacaggagcgtaaaaaagttgagagcgaaaggagagagctctttgaagagaga
cgtgccaaacaaacagaactgcggcttctggagcacaaagtggagctcgctcaactgcaa
gaagagtggaatgcacataattcaaagctcatcaagttcattcgcacgaagaccaaaccc
ccgatcttctacctgcccgggcgaatgtgctccgctactcaaaagctcctggaggagtct
cagaaaaaattaaatggtgtgtttgatgagagacgtgaagcctttgcagagcaactcaac
aaaatggaggctcggccaaggcgtcagtcccaaaggacaggtgacagagaaatggaggat
ggccgtcgggctgaagagacgaagaaagaagatcaagaggagggtaaggttggagtaggg
cggacaggtaaaaggcataatgtggagatggaggacgaggaggaagatgtagttgaggag
gaaggagaggagagctcagagattagggagcaggagggagatcaagagcagagtgagaag
gataaacacgaggagagtgagctaaaggcagaggaggaagatgaggatgaggacgaggag
gatgtaggaacaagtgaggttaaggaagagggagaagagcagatggaagttgcagaagtt
gtgagggaagatgaggcacagagtaagttgcaggttgagagtccagaagccacagttgaa
gaggtaggtaatgtgcaaaaggaggaagagcaggagacagagaatgagaatcagcaggaa
attgtcacagactctcagcaaacccccgaaagccacatggaaatacagcctgaggagtgt
aaagagcctcaactggacgtcccgactcctagtgtgatggaacatgacaccaaacaagat
gacacggcgcctgagacccaacagacactgcttgaacctgacccagaaatccctcaagag
caaagccaagagccatcagtccaaccacaagaagccaaagcagacacaaaggaagctagc
gaggagaccgatgaggctcgcggacgggccaaagtccgtgccaagaggagcaagagccga
agtagcacttcttcttccagttcctcttcaagctcctccaccagtggatccagctcctct
tccagtggctccagtagcagttcctctggctcctcctcgtcatcttccagttcacgctcc
cgtagtcacggcagggagagagatggccgagatcacaaacgccgccggagaccgtcggac
agggagcgcagaaagagcggcggtgagagaggacacaagtcctcaaaaggcagtggacga
gaaagcaagggctccaaagacaagaactccaaacctgacaagaagaggacgagtacggaa
ggaagcaggtcagcgaggaggtcctccagaagtgagagggatcggaagtctgatcggaag
gatcgacgttga

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