Cyprinus carpio (common carp): 109107032
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Entry
109107032 CDS
T05134
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109107032 (dhx32b)
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109107032 (dhx32b)
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109107032 (dhx32b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
109107032
NCBI-ProteinID:
XP_042598488
Ensembl:
ENSCCRG00000029108
UniProt:
A0A9Q9XAZ4
LinkDB
All DBs
Position
B17:16719113..16730717
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AA seq
730 aa
AA seq
DB search
MEMELSTDVEKLSETSETQDIDTDDLLELNQFDGLPFSSRYYKLLRERKGLPVWGAKCEF
MDSLMSSQIVIVTGTAKTGQSTQIPQWCAEFCLSAQYQNGMVVCTQIHQQSTVELALRVA
DEMDVNIGSEVGYSIPLQTCCSPDTVLRYCTDDVLLREMMSDPLLEQCGVVVIDQAHERT
VSTDLLLGLLKDVLLARPELRLVILTASRSAEKLLRHYGSVPQIRLDGPQPCEVVYGSGR
GGVKDYLCSALRLALEIHQNQKHGDIVTFLATEQEIECAHAILRREGANLAFSHGELVPV
SLCPEQGDSPSVISEDSKSRRVFLTCSPSEDLFWAVHSIRFVIDAGVQKRYVYNPRIRAN
SIVIRPISKSQAESRKQLAGPTGKCFCLYQEDTSLPAESVPHILESDITSTVLFLKRMEI
AGLSHCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQMAKTLLASC
EFDCVSEVLTIAAMLTAPSSFLTPPVELRQKALLCHQRFQHAEGDHFTLINIFNAFKYAK
EGPYSNVERWCEDHFLSLSALQTADAIRSELTEILKRLELPVSLPAFGSKSNSLNIKRAL
LAGFFMQVARDIDGSGNYFMLTHKHVAQIHPLSGYGTEMHKKNLPEWVLYHEHTLSENNC
IRTVSQISAHEFIQMAPQYFFYNLPPSESKDLLQHIIDHGSAAPSKGKRKSQTPSSPASE
EQSHERCTIQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagctatcaacagatgtggagaaactatctgaaaccagcgaaactcaagat
attgatacggatgatctgctagagttaaatcagttcgacggactccctttttcttcaaga
tattacaaactattaagagaaagaaaaggtctgccggtgtggggagcgaaatgcgagttt
atggacagtttgatgagcagccagattgtgatagttactggcacagctaaaacaggacaa
agcactcagatccctcagtggtgtgcagagttttgcctgtctgcgcagtatcagaacggc
atggtagtgtgcactcagattcatcaacagagtacggtggaactggccctccgtgtggct
gatgaaatggacgtcaacatcggcagtgaggttggatacagcatcccacttcagacctgc
tgctcccctgacactgtactgagatactgcacagatgatgtgttgctccgggagatgatg
tcggaccccctcttggagcagtgtggcgtggtggtcattgatcaggcccacgaacgcacc
gtcagcacagacctgctcctcgggctgctcaaagacgtgctcctcgcacggccagagctc
aggctggtcatcctcaccgcctctcgctccgctgagaaactgctacgtcactatggaagc
gttcctcagatccggctggatgggccgcagccgtgcgaggtcgtgtacggtagtgggaga
ggaggtgtgaaggattacctctgctctgctcttagactggctctggagatacatcagaat
caaaagcatggagacattgtgacatttctggcaactgagcaagagattgaatgtgcccat
gccattttgcggagagagggtgccaatcttgcattttctcatggcgagctggtgcctgtg
tctctgtgtcctgagcaaggagacagtccctcagtgatctctgaggacagcaagagtagg
agagtcttcctcacctgcagccccagtgaagacttgttctgggccgttcacagcattcgc
tttgtgattgatgctggagtgcaaaaaagatatgtgtacaatcctagaatcagagccaat
tccattgttattcgtcctatcagcaagagccaagctgagagccgcaaacaacttgcaggc
ccaacaggcaagtgtttctgtttgtatcaagaggacacatcacttcctgctgagagcgtc
cctcatattcttgagtctgacatcacttccactgtgctcttcctgaagcgcatggaaatt
gctggcctgagccactgcgacttcattgacagaccagatccagaaggcctgatgcaagct
ttagaggaacttgactatcttgctgctttggatgatgacggaaatctgtccgagattgga
attatcatgtcagagtttcctctggagccacagatggctaagactttgcttgcgtcttgc
gaatttgactgtgtgagtgaagtgctgaccatcgctgccatgctcacagctccgagcagt
ttccttacacccccagtggaactgagacagaaggccttactgtgtcatcagaggttccag
catgcagaaggagaccacttcacccttattaacatctttaatgctttcaaatatgctaag
gaagggccatactctaatgtggaacgatggtgtgaagaccatttcctcagtctgtctgct
cttcagacggcggatgcgatacgctctgagttaacagaaatcctgaaacggctagagctc
ccagtgtctttacctgcctttggctctaaaagcaacagcctgaacatcaaacgtgcccta
ctagctggcttcttcatgcaggtggcgagggacattgacgggtcagggaattacttcatg
ctgacccataaacatgtggctcagatccacccgctgtctggctacggaaccgagatgcac
aagaagaacctgccagaatgggttctgtaccatgagcacacgctgtcagagaacaactgc
atcagaaccgtctctcagatctcagcacatgagttcattcagatggcgccgcagtacttc
ttctacaacctgccacctagcgagagtaaagacctactgcagcacattatcgatcacggt
tcagctgccccatctaaaggcaaaagaaaatcccagacccccagcagccctgccagtgaa
gagcagagccatgagcgctgtaccatacaatga
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