Cyprinus carpio (common carp): 109107238
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Entry
109107238 CDS
T05134
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109107238 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccar01002
]
109107238 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109107238 (shhb)
Peptidases and inhibitors [BR:
ccar01002
]
Cysteine peptidases
Family C46: hedgehog family
109107238 (shhb)
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Morphogens
109107238 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DUF7764
Vint
Hom_end_hint
Ribosomal_S6e
DUF7467
Motif
Other DBs
NCBI-GeneID:
109107238
NCBI-ProteinID:
XP_018976057
Ensembl:
ENSCCRG00000036370
UniProt:
A0A8C1XEA1
LinkDB
All DBs
Position
B2:complement(17082716..17087757)
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AA seq
416 aa
AA seq
DB search
MDVRLHLKRIAFLCFISLLLTPCGLACGPGRGYGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSGTVTLADGRRKHIKDLKVGDRVLAADEEGNVLLSD
FIMFMDHDPTTRRQFIVIETSEPFTKLTLTAAHLVFVGNASASSGTTATFASNVKPGDTV
LVSEGTGKSLKSVTVKRIYTEEHEGSYAPVTAHGTIIVDRVLASCYAVIESHKWAHWAFA
PVRLSHKLMTWLFPARDSNVTFQEDGIHWYSNMLFHIGSWLLDRDSFHPLGISHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaggctgcatcttaagcgaattgcttttctgtgttttatcagcctgcttctg
acgccttgtggattagcctgtggtcccggtagaggttatggaaaacgaagacacccaaag
aaattaacccctttggcttacaagcaattcattcccaacgttgcagagaaaacgctcggg
gcaagcggcaaatacgaaggcaaaatcacaaggaattcagagcgatttaaagagctgatt
ccgaattataatcccgatatcatctttaaagacgaggaaaacacaaacgctgacagactg
atgaccaagcggtgtaaggacaagttaaattcgttggcgatatccgtcatgaaccagtgg
ccaggtgtgaaactgcgggtcactgaaggctgggatgaggatggtcaccatttcgaagaa
tctttgcactacgagggacgagcggtggacataactacctcagacagggataaaagcaag
tatgggatgctatctagacttgcagtggaggcaggattcgactgggtctattatgaatcc
aaagcccatatacactgctctgtcaaagcagaaaattcagtcgctgctaaatcaggggga
tgctttcctggatctggtacggtgacactcgcagacgggaggaggaaacacatcaaagat
cttaaagtgggcgaccgggttttagctgcggacgaagagggaaatgtcttattaagcgac
ttcattatgttcatggaccacgatccgacaacgagaaggcaattcatcgtcatcgagacg
tcagagccttttacaaagctcaccctcacagcggcgcacctcgtattcgttggaaacgcc
tcggctagttctgggacaacagcaacatttgccagcaacgttaagcctggagatacggtt
ttagtgtcggaaggaacaggcaagagcctcaagagcgttacagtgaagaggatttacact
gaagagcacgagggctcttacgcgccagtcaccgctcacggaaccataatagtggatcgg
gtgctggcttcgtgttacgcggttattgagagtcacaagtgggcgcactgggcttttgca
ccggtcaggttaagtcacaagctgatgacgtggcttttcccggctcgtgattcaaacgtc
acttttcaggaggacggcatccactggtactcaaacatgctgtttcacatcggctcttgg
ctgctggacagagactctttccatccactcgggatttcacacttaagttga
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integrated database retrieval system