Cyprinus carpio (common carp): 109107386
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Entry
109107386 CDS
T05134
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04270
Vascular smooth muscle contraction
ccar04625
C-type lectin receptor signaling pathway
ccar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109107386
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109107386
09153 Circulatory system
04270 Vascular smooth muscle contraction
109107386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109107386
Membrane trafficking [BR:
ccar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109107386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
109107386
NCBI-ProteinID:
XP_042580869
Ensembl:
ENSCCRG00000038630
UniProt:
A0A9R0A0I5
LinkDB
All DBs
Position
B5:22542026..22618543
Genome browser
AA seq
1431 aa
AA seq
DB search
MSGTQSTLAERFPKKASRTGSILSKDHPPDKKPKSDKASVPPSHEFDPTGLVQRCVIIQK
DENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSG
SYVALTVLGRPPGLPQIPLSDGEGEEGPLFSPTSPHSPGPIGPDRLSSSPSPSERKPTPL
SVWAMMEEHSRNPTPKLLKEIQDAKKHIPQHQEQLSKPSGTGQDGSLSPRPGEGEQEDGG
GDLNQPPSWQGDAGMEPPLSNNTTTPVTPSPVPESPCQRETPCHSPKTTPRDSLNSCPSP
DAEDTPDLDSQSSVGSPSSRPVAPIIGAEDEDFDTEQEQMNGQCSCFQSVDLLKSRPAHL
AAFIHHVVSQFDPAPLLCYLYAEIYKQTSSKETRRILMDTFFIDKTASLKVTVPESIIAD
LERTAHSNNAERKRPEPISEDVHRQYVQQLQDTLLPDIQKNLEDFRHKRSMGLTLAEAEL
ARLDTERMRDRVALEKERSCAEHIISKIEDVLLTSQATEEDKCSTMQFVILSYMKQLGVK
VKESRGLEHKPKLMNLFPKIKKSIKPEKDGSEEKSKKTRFPSVFPQRRPSRIDTSAISRA
LEPKQHPRKPQLPLGAGDQADGSSPPVRSSQSCEGSDGTTALVTSPPYSAPATQGTDGIS
RESEAGGVPSSALPRLGDGVVPGDLQDSSSSNTHFDFSPCTLEHLQEEEAETDKTQDTGT
PRPDRRRMEPLGSGEVQSEDDQCAEVELEPLNWQTLVSRDVLSTLTPQEIKRQEVINELF
YTERAHVRMMKVLENLFYQPLIREAILPPADIKNIFSNLEEIVQLHLSLTEQMTAVRKKN
ETALIDSIGDDLLSWFSGEEEAKIKRAAGMYCSNQPFALELIKSKQKKDQRFTSFIQEAE
SNRHCRRLQLKDIIPVETQRLTKYPLLLENIAKYTEDPEERSKVKQAGECCRKILTHVNQ
EVKEAENKQRLEDYQRRLDLSSLKQSENPMIAEFKNLDLTKRKMVHEGPLSWKVNKDKTI
ELYTLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLSTVMVRSVATDNRS
FFVISMSDNGAQIYELMAQTVSEQKTWQCLITQRADCMKTKLHNIIPLPQTDGEREAVEL
INSGVQKLNKDSEPISLVSIQSPEKDGTEVMPTPPCSTNPFETKSDEEDGGEENSLQDQA
EDDEAFVVADMTDRLTFLKQRSRLGIAIDEDEAEAFELQPLRADEALRTLATLRQLLINQ
MSSQEDTDRDIERREQQEDLARTGSQQGAEDSTTIRSPVENGSERAENRRENAQELPSGD
TGFFETSEDCVSAGSYMVLEAYGESNTDDDVQGSSGEPVAAGDSGIDLKKLLSCSSQSSG
GPNLNRQIMTHIRLLQANLQHLKDTEIKYNQLRQRLSEETATDTEENKDKS
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtccacgcttgctgagaggtttcccaaaaaagcgagcaggacagga
agtattctcagcaaggatcatcccccagacaaaaagcccaaaagcgacaaggcgtcagtc
cccccctcgcatgagtttgaccccacagggcttgtgcagcgttgtgttatcatccagaaa
gatgagaatggctttgggctgacagtgagtggcgataaccctgtgtttgtacagcttgta
aaagaggatggagctgccatgcgagctggtgttcagacaggtgaccggatcataaaggtc
aatgggacattagttacacattcaaatcatgtagaagttgtaaagctaataaaatcgggc
tcctatgtggccctgacagttctggggagaccgccgggcctgcctcagatccccctctca
gacggcgagggggaggaggggcctctcttctcacccacctcccctcattccccggggccc
atcggtccagaccgcttgtcttcctcccccagcccctcggagcgcaaaccgacccctctg
tctgtatgggccatgatggaggagcacagcaggaaccctacacctaaactactgaaggaa
atccaggacgccaagaagcacattccacagcaccaggagcagctcagcaagccctctggg
actggacaggatggctccttatctccaaggccaggagaaggagagcaagaggatggaggg
ggagatttgaatcagcccccttcatggcagggcgatgctggaatggagccaccgttgtcc
aacaataccacaacccctgtcactcccagtcctgtcccagagagtccatgccaaagagag
accccctgccacagcccaaagaccacaccccgagacagcctcaactcctgtccttcaccg
gacgccgaagatacacctgaccttgattctcagtcgagtgtggggagcccctcctctcgt
ccggtagcacccatcattggtgctgaggacgaagactttgacacagagcaggaacagatg
aatggccagtgtagctgttttcagagcgtagacctcctgaaatctcggcctgctcacctg
gcagctttcatccatcatgtggtctctcagtttgaccctgcaccgctgctgtgctacctc
tatgctgaaatttacaaacagaccagctccaaagagacacgacgaatcctcatggatacc
ttcttcatagataaaacagctagcttgaaagtaacagtgccagaatccatcatcgctgac
ctggaacggactgcacactcaaataatgcagaacggaagaggccggaacccatctcagag
gacgtccaccgtcaatatgtgcagcagctgcaggacacactactacctgacatccagaag
aacctagaagacttcaggcacaagcgcagtatgggtctgaccctggctgaagcagagcta
gcccgtctggatacagagagaatgagagatcgcgtggctctggaaaaagagcgatcctgt
gcagagcacattatctctaagattgaggatgtactattgacgtcacaggccacagaggaa
gataagtgtagcaccatgcagtttgtgatactgtcatatatgaagcagctcggcgtaaaa
gtgaaggagtctcgagggctggagcacaagcccaagctaatgaatcttttccctaagatc
aagaaaagtataaagcctgagaaagatggaagtgaggagaaatcaaagaaaacacgattt
cctagtgtctttcctcagagacgaccgagcaggattgacacttcagcaatcagcagggct
ctggagccgaagcagcatccgagaaagcctcagctgccgttgggcgctggagatcaggca
gacgggtcgtcacctcccgtacggagcagtcagtcgtgtgaaggctcagatggcaccact
gccctggtcacgtcacccccttacagtgctccagcaacacagggcacagacggcatcagc
cgagagtctgaggctggtggagttccctcttctgcactacctagactgggagacggtgtc
gtcccgggagatctgcaggactcgtcctcttcaaacactcacttcgacttcagcccctgt
acactggagcatctacaggaggaggaagctgagacagacaagacacaggacaccggcacc
cccaggcctgacaggaggaggatggagccgctgggctctggagaggtgcagagtgaagat
gatcagtgtgctgaggtagagctggaacctctgaactggcagacgctggtgagcagggac
gtcctgtccacacttacccctcaggaaatcaagagacaggaagtcatcaacgagttgttc
tacacagagagagcacacgttcgaatgatgaaggttctggagaatttgttttaccagccg
ctgatccgagaggccatcctccctcctgcagacatcaaaaacatattcagcaacctcgag
gagatcgttcagctgcacttgtctttaacagaacaaatgactgcggttcggaagaaaaat
gagacggcactcattgactcgataggagatgatttgctttcctggttcagtggagaagaa
gaagcgaagatcaagagagctgctggcatgtactgcagtaatcagcctttcgccctggaa
ctcatcaagagcaaacagaagaaagaccagcgcttcacctccttcatacaggaggcagag
agtaaccgacattgtcgcaggctacagttaaaggacattattcctgtggagacacaaaga
ctcacaaagtatcccctcctgctggagaacatcgccaaatacacagaggatcctgaggag
agaagtaaagtgaaacaggctggcgaatgctgtcgaaagattctcactcacgtcaaccag
gaggtgaaggaagccgagaacaaacagaggttggaggactaccagagacgactggacctg
tcctcactgaagcagagtgagaaccccatgatcgctgagttcaagaacctggacttgact
aagaggaagatggtgcatgagggaccgctgtcctggaaggtcaacaaagacaaaactatt
gagctgtacacattgctgctggaggatatattggtgctacttcaaagacaagatgagaag
ctgatcttaaaatgccacagtaagaatctggcgggcactgctgagaccaaacacatcttc
agccccatcatcaaactcagcactgtgatggtgcgctcggtcgccaccgacaacaggtca
ttctttgtgatctctatgtctgataatggagcccagatctatgaactaatggctcaaacc
gtttctgagcaaaagacgtggcagtgtctgatcacacaaagagccgattgtatgaagacc
aaactacacaacatcattccattacctcagactgacggggagcgtgaagcggtcgagtta
ataaactctggtgttcagaaactaaacaaagactctgagcctatttctttagtgagcatt
cagtctccagaaaaagatggcactgaggtcatgccaaccccaccatgtagcaccaaccca
ttcgagaccaaatctgatgaggaggatggaggagaagaaaactcactacaggatcaggct
gaagatgatgaagcgttcgtggtggctgatatgaccgatcgacttacattcctgaagcag
cgctcgaggttaggcatcgccatagacgaggacgaggccgaggccttcgagctccagcca
ctccgagctgatgaagctctcagaacactggcaacactaaggcagctcctgatcaaccaa
atgtccagtcaggaggacacagacagagacattgagaggcgagagcaacaggaagatttg
gcgaggacaggctctcagcagggggcggaggacagcactacgatcaggtctcctgttgag
aatggctcagagagggccgagaacagacgggagaacgcacaggaactgccctccggagac
acaggcttctttgagacgtctgaggattgtgtctctgcaggcagttacatggtgctggag
gcgtatggcgagagcaacactgatgatgatgtgcagggcagcagcggggagccagtggct
gcgggagactcaggcattgacttgaagaagctcctctcttgctcctctcagagcagcgga
ggaccaaacctcaacagacagatcatgacacacatacgtctactacaggccaacctgcag
catctgaaggatacagaaatcaagtataaccagctacgccaaaggctatcagaggaaaca
gctactgacacagaggaaaacaaagataaaagttag
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