Cyprinus carpio (common carp): 109107397
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Entry
109107397 CDS
T05134
Name
(RefSeq) VPS10 domain-containing receptor SorCS2-like isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109107397
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Others
Others
109107397
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
109107397
NCBI-ProteinID:
XP_042616430
UniProt:
A0A9Q9YAW1
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Position
A7:23366514..23530405
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AA seq
1166 aa
AA seq
DB search
MKALIMAVLAHLYTAVFFACAWMSLFGPISCHTGVINQRNVRDRGLDSGGGHVNGRDETL
ISAHSRGDYSGDPGGPVMGVPRVRRASTPEKVSLLSSSFVLKGDATHNQAMVHWTGENSS
VILILTKYFHADSNKVLESSLWRSSDYGSTYTKLNLMPGTTIIVTNFYICPTNKKKVILV
SSSINERDQMLFISTDEGSSFQRQPVSFTVDTLLFHPSEEDKLLAYSKEAKLYISTDLGH
KWTQLQERVTKDRVFWAVTGVDVDPDLVHMEIQDISGGYLYVTCLIQNCSDKMVTAQFLG
KIDHNSLSVQDEHIFVKVTTGNRTKYYVSYRRNEFVQMRFPKYALPKDVQIVSTDENQVF
LALQEWYQTDTYNLYQSDPQGVYYSIVLENVCSTKQPEENVLIDILEVRGIKGVFLANQK
VDGKVMTLITYNKGRDWEPLAPPTSDMNGKPVSCKQPDCHLHLHLRWADNPYVSGTVHTK
DSAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTS
IPLKILKFSIDEGQTWSIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVD
FRKSFPRQCTEADYDSWKLTDLQGEKCIMGQERMYRRRKESSFCIKGKSYTSALTAKPCQ
CTEKDFACDYGFERAPSLRVEGDRCYPDFWHDPDAPPENCHLGHSYKSSTGYRKVITNVC
EGGLNKEQSAKQHSCPLLAPKGLQLGIKGQMLAVGPGDDITFIVHQEQGDTTSTRYQVDL
MDGVRTIYENLTITDEPIQHRYEKPGVYRVNVKAENSAGHDQATLYIQVTAPLQDVHLEV
VPIAGRNQEVNLTAIVLPTEANLTVFYWWIGDNLQPKLTLENSLIARFSEEGEVPVTVQA
SNGRSMVQDSKTVIVYDQFQVIPLSFSRNLDRFNPNIPEWRQDVGQVVTKIIAKLTGVPQ
DSLVTMVKPGLPTTADLYVLPQESTPVKRSVFVDKRVPTIKQVLSENNVSFIVRGGLRVL
VTLADSDRATQMPSTTQGSRLAAAGPGVWALAVFLLISLISAAAFILFKFKRKNYKNHGS
LLRPEESSLTRPWLRFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQNIIQGEEFIDDDL
DSQTLGNHSGVVLSINSRELHSYLTS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctcatcatggcagttttggcgcacctgtacacagctgtgtttttcgcttgc
gcgtggatgtcactgttcggaccgatttcatgtcacaccggcgttataaaccagagaaac
gtacgggaccgagggcttgacagcggcggtgggcatgtcaatggcagagatgaaacgctt
atctcagcgcacagccgcggagattacagcggtgacccgggcggaccggtcatgggagtt
ccccgagtccggagggcatcgactccggagaaagtctctctactcagcagctctttcgtc
cttaaaggggatgccacccacaaccaggcaatggtccactggacgggtgaaaatagcagc
gtcatcctcattctcactaaatatttccatgcagactccaacaaagttcttgagagttcc
ctttggagatccagtgattatgggtcaacttacaccaagctcaacctgatgcctgggaca
accatcatagtcacaaacttctacatctgtcccaccaataagaaaaaggtgatcttggtg
agctccagcatcaatgaacgtgaccagatgctcttcatcagcacagatgagggttcatcc
tttcaacggcagcctgtctccttcactgtagatacactcctcttccatccatctgaggaa
gacaaacttttggcttacagcaaggaggcgaagctgtatatctccaccgatctgggtcac
aaatggactcagctacaggagcgtgttactaaagacagagttttctgggccgtgaccggg
gtggatgtggatcctgatttggttcatatggagattcaagacatcagtggtggttacctt
tatgtaacatgtctcatacaaaattgctctgataaaatggtgacagcacagttcttgggg
aagattgaccacaattccctctcagtgcaagatgaacacatatttgtgaaggtaactaca
ggaaatcgaaccaagtattatgtgtcataccgaagaaatgaatttgttcagatgagattc
cctaaatatgccctcccaaaggatgtgcaaattgtgagtacagacgagaatcaggtattc
ctggctctgcaggaatggtatcagacagacacgtacaacctctaccagtcagatccacaa
ggagtctattactccattgtgttggagaacgtctgcagcaccaagcagcctgaagagaat
gtcctcattgacatcttagaggttcgtggcatcaagggcgtattcttagccaatcaaaaa
gtagatggaaaagtgatgactctcatcacctacaataaaggcagagactgggaaccactg
gctcctcccacatctgatatgaatggcaaacctgtcagctgcaagcagcctgactgtcac
ctccatctccatttgcgatgggctgacaacccgtacgtatctggaacggtccacactaaa
gattctgccccaggcctcataatgggcgcaggtaaccttgggtctcagctggttgaatat
aaagaggagatgtacatcacctcagactgtggcaagacctggagacaggtttttgaagaa
gagcatcacattctttatctggatcatggcggtgtcattgtggccattaaggacacttca
atccctttaaaaatactcaaattcagcatagatgaaggacagacatggagcatccacaac
ttcaccagcacttctgtgtttgtggatggacttctgagcgaacctggagatgagacactg
gttatgacggtatttggccacataagttaccgttcagactgggagctggtgaaggtggat
ttccgaaagtcgtttcccagacagtgcacagaagctgattatgactcctggaaactcact
gacctacagggagagaaatgcatcatgggccaggaacgaatgtacagaaggaggaaagag
tcatcgttctgcattaaagggaagagctatacatcagctttaacagctaaaccttgccag
tgcacagagaaagactttgcctgtgactatggctttgagcgtgctcccagcctcagggta
gagggggatcgctgttatcctgatttctggcatgatcctgatgctccacctgaaaactgc
catttaggacacagctacaagtccagcacaggttaccggaaggtcatcactaatgtttgt
gagggtggcttgaataaagaacagagcgcaaagcagcattcttgccctttgctggcccct
aaaggccttcagctgggcatcaagggacagatgctggccgtgggacctggtgatgacatc
acctttatagtccatcaggaacagggtgacaccaccagcaccagatatcaggtcgattta
atggacggcgtcaggactatatatgaaaacctgaccatcacagatgaacccattcagcac
cgttatgagaagccaggtgtttaccgtgtgaatgtgaaggctgaaaactctgctggacat
gaccaagccacactttacatccaggtcacagctcctcttcaagatgtccatctggaggtg
gtcccaatcgctggcagaaatcaagaagtaaatctcacagctatagtgctgcccactgag
gcaaaccttacagtgttttactggtggattggagataaccttcagccaaagctgactctg
gagaacagtctgattgcaaggttctctgaggagggggaagttcctgtgacggttcaggct
tctaatggtcgatccatggtacaggacagcaagactgtcattgtctatgatcaattccag
gtcattccattgagtttcagtcgtaatttggatcgctttaacccaaacatccctgaatgg
agacaagatgtgggacaagtcgtaactaagattatcgctaagctcacgggggttcctcag
gattctttggttaccatggtgaagcccggtcttcccaccactgcagacctgtatgttctt
cctcaagagagcacaccagtgaagagaagtgtgtttgtggataagcgtgttcccaccata
aagcaggttctgagtgagaacaatgtcagcttcattgtgagaggagggttaagagtattg
gtgactctggcagactcggatagagccacacaaatgccttcaaccacacaaggttctcgt
ttggcggcagcaggtccaggtgtttgggctctagctgtctttctcctcatcagtctgatc
tctgctgcagcattcatactcttcaaatttaaaaggaaaaactacaaaaaccatggttcc
ttgctgaggccagaggagagcagcctaacgcgtccctggctgcgtttcagaaaactgcca
ggacgaaatgtctatgcccagatgcacaatgagaaggagcaggaaatgaccagccctgtc
aatcacagtgaggacacgcagaatatcattcaaggcgaggagttcattgatgacgacctt
gactcgcagacactaggcaaccactcaggggtggtgttgagcataaattcaagggagctg
cacagttacctgaccagctga
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