Cyprinus carpio (common carp): 109107628
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Entry
109107628 CDS
T05134
Name
(RefSeq) RING finger protein 17-like isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109107628
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109107628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_2
Zn_ribbon_15
CYP38_PsbQ-like
zf-RING_Vps41
DUF5402
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
109107628
NCBI-ProteinID:
XP_042587039
Ensembl:
ENSCCRG00000006652
UniProt:
A0A9Q9WPB6
LinkDB
All DBs
Position
B9:complement(14509390..14529773)
Genome browser
AA seq
1544 aa
AA seq
DB search
MTNSDWTIGSRVHQLMKQVTVVLWKMSETAVACNICGSSYTLPEDEAGGNLPHVLLCSHI
FCSTCLRALMSQQNIITCPECQMDTRIEEGVDGLEVDSRIIGLIYTARMNTKKGRHSGDR
CKSQRFKSPPSSTAVHTQENAEGRPDVVKVLDEALGKATENLSQLDKLHKTLSSGIHAQL
KKERTRIIREIDEAVDKAKSILQKRRSLLVSKLSDVDLLFADGRKECKRIEERIKELQTA
IQKAWHVRRVPSLETYCNLDKILETLHIPVDAESYDMSSMSLRTGLRCSLQMDSFVDSLR
NCLKITDDSDDCILEEVTVAPFQHVVKSGVEVWESSSQSVRGNADPIPKKKSTCRPSFIE
EIVEDIDTSSEIVETAHSSPGPEPRRNERHKALRRLRRQHFDRPLTPQTKVVHYVMATHI
VNPGHFYVRYMMEQKSGQNLTKKVNEFCSGDSSLFTFSDEIKTGSMLFIYWKEDMWCRVT
VTELFQKECFQSVTKCLASEVSRLCVYFQDFGFSKGISIPSDGGLSMLNECLRRPDAATL
AQMNGWAPLAIKCSLKDIIPTDLLRGWSLEAADEMRGLLGSEAVEMQVFGEDGDALLVDL
KKTPMVSLREHLVFMGLARFYSPIVAPGSAPLLFYPSVRPTLNVEVNAMVSHVNTPSDFY
VQLVENMEYLLLHSKLQDCYSRPQANSEFQVYCPSLSQACVACYDQEWCRVQVIGFPGGR
MVEVRYVDFGYRKTLSVKDLRQIKDEFFALPEMALWCSLNDVVSPQETWSDEACVVFKEL
VEHKLITVVAKKLVPGTRPVPVCLYEIGDDCTGASIGEILVRNGLAVSSKQSQIKDAQPL
ETTVWDPPFEEEPLSVVLTPAPPPPASEELKPSLILPTCVKDIKVRVTHVTSPGNIFVQL
LQFDGQLKRIHDTLKSLFSKSEPQEMLWEAEMFCAANNTGVWERGKVCSVSTNGVAEVLR
CDFGNKVNLHVNNLRPLSPDLTGSFLLECNLSGVRPAGGRSTWTATACDFISHYLTGAMA
VMTIKDPSTRPVLVSLFCSNRAGQNVSFADFLISEGLALKERKAASISETIFSEQCVLSE
KIPEPQRITSLPQTPPTPTPRINPPPERVQTHSYPPPELPPCGHVLMSISAISEQGVIYA
MTYQAVCEFDRLRERLQQHIKTMPRQKNYNWKGVLGCAVMGTDMFWYRGQVQEVIGGHVK
VQYVDQGLVESIPVCHVYPMVLCEDVPQLCVPCQINGVIPIGKGWQWDAVVLMKELLLGR
SVYVHIIEHPEDPCGCVKVEITVDGMALSKIMVHHQYASFDPAISSQEDYVVKPPVPDLD
DWDLNTEGLEEPQPVFGVYKELQIPRARTHFPAKVKHIRTPNEVFLCVLDKTLCQQKQQE
SLEEALERVNENIDNLSLLTDFPIECPCLAEYSDGKYYRAKLLGFSQLTPSVKLLVRHVD
FGSDDILPTQKLRQLPASLHHFPCAAVYVKLAGFKPTNVCLDSERIPYRPEWSMRAMMEM
INLLNGELTAVLTATEPQLTVLLYNAEGSLVHRPLVEKGLADYA
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattctgattggacgattggcagtcgagttcatcagttaatgaaacaggtcaca
gttgtcttatggaaaatgtcggagactgcggttgcttgtaatatctgtggctcatcttac
acattacctgaagatgaagctggggggaatctccctcacgtgctgctgtgcagtcatatt
ttctgcagcacatgcctgcgcgcgctcatgtcccagcaaaacatcatcacgtgtccggag
tgtcagatggacaccagaattgaggaaggagtggatggtttggaggtggacagcagaatc
attggcctcatctatacagcgcggatgaacacaaagaaaggcaggcactctggagacagg
tgtaaatcacaaaggtttaagagcccaccgtcatcgacagccgtccacacacaggagaat
gctgaagggaggccagatgttgttaaagttttggatgaagctcttgggaaagcaacagaa
aacctcagtcaacttgataaacttcacaagactctttccagtggtattcatgctcagctg
aaaaaagagagaactcgaataatcagagaaattgatgaggctgttgacaaagcaaagagt
attctgcagaaaagacggagtttgttggtgtcaaaattgagtgatgtggatctacttttc
gcggatggtcggaaggaatgtaagagaatagaagagaggataaaggagctgcaaacagcc
atccagaaagcatggcatgtccgacgggttccttctctggagacctattgcaacctagac
aagattttggagacgctacacattccagtggatgctgaatcatatgacatgagctctatg
tcattgcgtacaggactccgctgcagtcttcaaatggacagttttgttgacagtttgaga
aactgtcttaaaattacagatgacagtgatgactgtattttagaagaagttacagtggcg
cctttccaacacgttgtgaagagtggtgtggaggtctgggagagctccagtcagtctgtt
agaggaaatgcagaccccattcccaaaaagaaaagcacatgcaggccaagtttcatagag
gaaatagtggaagacatagacacttcttcagagatagtagaaacagctcatagttcccca
ggacctgaaccaaggcgcaatgagaggcacaaagcacttcgaagacttcgcaggcagcat
tttgataggcccttaactccacagactaaagtggtgcactatgtcatggcgactcacatt
gtgaaccctggacatttttatgtccgctatatgatggaacagaagtcaggccaaaacttg
accaaaaaggtcaacgaattctgctctggagacagtagcctcttcacgttcagtgatgaa
atcaagacaggctctatgctctttatctattggaaggaggatatgtggtgtagggtaaca
gtgactgagctctttcagaaagagtgtttccagagtgtgaccaaatgccttgcatcagaa
gtctcccgtctgtgtgtctacttccaggactttggcttctccaagggcatttcaattcca
agtgatggaggtttaagcatgttgaatgagtgtctgcggagacctgatgctgcaactctg
gctcaaatgaatggctgggctcctctggccatcaaatgctcccttaaagatattattcct
acagacttgctgagaggatggagtttagaggcagctgacgagatgaggggcctgctggga
tctgaggctgtggagatgcaggtgttcggtgaggacggagatgcactgttagtggatctg
aagaaaacgccaatggtgtctctgcgggagcacctagtgttcatggggctggccagattc
tactctcctatagtcgcccctggcagtgcacccctactcttctacccatcggttcgcccc
acactcaatgttgaggtcaatgctatggtttctcatgtgaacacaccatcagacttctat
gtacaactagttgaaaatatggagtacctgctgttgcactcaaagctccaggactgttac
agccgtccccaggcaaacagtgagttccaggtctactgcccttctctctcacaggcctgc
gtcgcttgctatgaccaagaatggtgcagggttcaagtcataggtttccctggtggtcgg
atggttgaggttcggtatgtggactttggctacagaaagactctctctgtgaaagatctg
agacagataaaggatgagttctttgctttgccagaaatggccttgtggtgcagtctgaat
gatgtggtcagtccacaggaaacatggagtgatgaagcctgtgttgtgttcaaggaactt
gtggagcataaacttatcactgttgtggcgaaaaagctcgtgcctggcactagacctgtg
cctgtgtgtctgtatgagattggtgatgactgcactggagccagtattggagagatactg
gttagaaatggtctcgctgtttccagtaaacagagccagattaaagacgcccagcccttg
gagacaaccgtatgggaccctccatttgaagaggagcctctgtctgttgttctgactcct
gctcctcctcctcctgcttctgaagagctgaagcccagcctgattctgcccacatgtgtc
aaagacatcaaagttcgtgtgacacatgtcacctctcctggaaacatctttgtgcagctg
ctgcagtttgacggccagctgaagagaatccacgacacgctaaagagtcttttctctaag
tcagagccacaggagatgctctgggaagcagagatgttctgtgctgccaacaacactggg
gtttgggaaagaggaaaagtgtgcagtgtgtccactaatggtgttgcagaggttttgcgt
tgtgactttggtaataaagtgaatctccatgtaaacaatctcagaccactcagtcctgat
ctgaccggatctttcttactcgaatgtaacctcagtggtgtaaggccagctggtggtcgc
tccacatggacagccacggcgtgtgacttcatctctcactacttgactggtgccatggct
gtaatgaccataaaggacccatccaccaggccagtgctggtgtctctgttctgttcaaac
cgtgctggtcaaaatgtcagtttcgccgatttcctcatcagtgaaggacttgctctaaag
gagagaaaggctgcttccatatccgagaccatcttctcagagcagtgtgttctgagtgag
aagattcctgagccacagagaatcacgagcctacctcagacaccacccacacccacccct
cgcatcaacccaccaccagagagagtgcagacacactcatacccccctccagagctgcct
ccctgcggacacgtgctcatgagcatctcggccatctccgaacaaggtgtcatttacgca
atgacatatcaagcagtgtgtgagtttgatcgcttacgggagcggctgcaacagcacatt
aaaaccatgccaagacagaagaactacaactggaaaggagttttgggatgtgctgtcatg
ggaaccgacatgttctggtacagaggtcaggtgcaggaggtcattggaggacacgtgaag
gtccaatatgtggatcagggacttgtggagagtatcccggtttgtcatgtgtaccccatg
gttctctgtgaggatgtgccgcagctctgtgtgccctgtcagataaatggagtcataccg
attgggaagggctggcagtgggatgctgtggtgctcatgaaggagttgctacttgggcgt
tcagtctatgtccacattattgagcacccagaggatccgtgtggctgtgtaaaagttgag
ataacggtggatggaatggcgcttagcaagataatggtgcatcatcaatatgccagtttt
gatcctgccatcagcagccaggaggattatgtggttaagcctcccgtccctgatttggat
gactgggacctaaacacagaggggttggaggagccgcagcctgtatttggggtttataaa
gaactccagattcctagagcaagaacacatttccctgccaaggtcaagcatatccgcacc
ccaaatgaggtgttcctgtgtgtgctggataagactctgtgccaacagaagcagcaagag
agtttggaggaagctcttgagcgtgtgaatgagaatatagataatctgagcctgctgaca
gacttccccattgagtgtccctgtctggctgagtacagcgatggtaaatattatcgtgcg
aagctgctgggtttttctcaactcactccttcagtgaagctccttgtgagacatgtggat
tttggttcggatgacatcttaccaacacaaaaattgcggcaactccctgcatcccttcat
cattttccgtgtgcagcagtttatgtcaagttagcaggcttcaaaccaacaaatgtgtgt
ttggattcggagaggataccttaccggcctgagtggagtatgagagccatgatggagatg
atcaacctgttgaacggagagctcactgcagtgctcaccgcaactgaaccacagctgact
gtgctgttatacaatgcggaagggtcactcgtccacagacctcttgtggagaaaggcctc
gctgattatgcatga
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integrated database retrieval system
