Cyprinus carpio (common carp): 109107968
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Entry
109107968 CDS
T05134
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109107968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109107968
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109107968
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40
Utp12
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_ACSF4
WDR90_beta-prop_4th
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
ASA1
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_RSE1_2nd
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Tricorn_2nd
Beta-prop_SCAP
Paf1
UTP15_C
Beta-prop_IP5PC_F
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
109107968
NCBI-ProteinID:
XP_042629979
UniProt:
A0A8C1MP66
LinkDB
All DBs
Position
A17:10999752..11008627
Genome browser
AA seq
676 aa
AA seq
DB search
MRAIQFSLTRVSRVDGRTRNGKMAADGGRAALPCAFSPKSQQFLALCAQDGRLRIWNTDS
KTLQQEYVPSAHLSSACTCVTWGPCRAVQEVPQRKRRKCEAGSAPELSDLLALGTAAGSV
LIYSTVKGDLHCTLEGGHSGPVNSVQWHPEDSVLYSGSDDTHIAEWDLQTGKVRCKWKAD
RSAVSSLCISPDGKLLLSAGMTIKMWNLETKEVYRKFTGHSTMVTTLCFTTTRPPDSNGM
YFLSGAAHDRLLSVWQVRSDGKDKNSVVSFTLTDEPQHIDLQTSNCKDEPVRLAVVCKDG
QLHLFEHFLNGPCKKPLSPVCSLQVSTMKGDSPVPVPLLAAALRADRQNLMLAYGHHLQP
VMEKTPFNTSERHICLVRDVHGTLSLSVDTAVSKVKTPVVNKQSKVLVPGLPGHKAPIKL
TPNEAEKRKKEDSTTEMSIEERLEQIELSVGGRDDGKGTSSLQTDSFAVLLVQGLESNDQ
RILAKIFQTKKEMLIKNTVARLPPQAVLPLLEELSRRLQGHPFAALLIVQWFKAVLTQHT
SYLSSLPDLVSQLGSIYHMIESRVKLYQQLTRLHGKLYLLMTQVATNNSAKNVDNISHKA
KLVYEEESSDEDEDSRDEGCPEDDSDNWEEDEAAMELTEDKKNHKDEEDDEEDDMNDESK
ANGDSDLDPENESEEE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctatccaattttctctcacacgtgtttcccgagtagacggacgcacgcggaat
ggtaagatggcggcggacggaggccgagctgctctaccctgcgccttcagccctaaatca
cagcagttcttggcgctctgcgcacaggacgggagactgcgcatctggaataccgacagc
aaaactctacaacaggaatacgtgccttccgcgcacctgagctcagcctgtacctgtgtg
acatggggaccgtgccgagctgttcaggaggtgccacagaggaagaggaggaaatgtgag
gccgggtcggctcctgagctgtcagatctgttggccctgggcactgctgctgggtccgtc
ctcatctacagtacagtgaagggagacctgcattgtactctggagggaggtcacagtgga
ccagtgaacagtgtccagtggcatccagaagactcagtgttatacagcggctcagatgac
acacacatagcagagtgggacttgcagacaggaaaagttcgttgtaaatggaaggcagac
agatcagctgtcagcagcctgtgtataagtccagatggaaagctgctgctctcggcggga
atgaccatcaagatgtggaacctggagactaaggaagtgtacaggaaattcacaggtcac
tctaccatggtaacgactctgtgcttcaccacaacacgacccccagacagtaatgggatg
tacttcttatcaggggcagctcatgacaggctcttgagtgtgtggcaggtacggtccgat
ggcaaagacaagaactctgtggtgtcttttactctgacagatgaaccccaacacatagac
cttcagacatccaactgcaaagatgagcctgtgaggttagcagtggtgtgtaaggacggt
caacttcatctctttgagcactttctgaatgggccgtgtaagaagccgctgtctccagtg
tgttccctgcaggtgtccactatgaagggagactcaccagtgcctgtgcctctgctcgca
gcagctctgcgtgctgacagacagaacctgatgctggcgtacggacatcacctgcagccg
gtcatggagaaaactccttttaacacatcagagagacacatatgcttagtcagagatgta
cacggcacactttctctctctgtagacactgctgtctccaaggtgaagacaccggttgtt
aataaacagagcaaggttttagtaccaggacttccgggacacaaggcgccaatcaaatta
actcccaatgaagcagagaaaaggaaaaaagaggacagtaccacagagatgtctatcgag
gagcggttggagcagattgagttgagtgttggagggagagatgatggtaaaggcacgtcc
tccctgcagacggacagttttgctgtactgcttgtgcagggactggagagcaacgaccag
cggatccttgctaaaatatttcaaaccaaaaaagagatgttgataaagaacactgttgcc
cggttaccacctcaggctgtcctgcccttgctggaagagctgtccagaagactgcagggg
catccattcgcggctctgcttatagttcagtggtttaaggctgtacttacacaacacaca
tcgtacttgtcttcgctgccggatctagtgtctcagttgggctccatctaccatatgatt
gagagcagggtgaagttatatcagcagctcacccgactccatggcaaactgtacctgctc
atgacacaggtggcgacaaacaacagcgctaagaatgttgataacatttctcacaaagca
aagttggtttatgaagaagagtcttcagatgaggatgaagattcaagagatgaagggtgt
cctgaggatgactcggataactgggaggaggatgaggcagcaatggaactgacagaagac
aaaaagaaccacaaagatgaggaggacgatgaagaggacgatatgaatgatgaatcaaaa
gcaaatggtgactcagatctggaccctgaaaatgagagcgaggaagaataa
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