Cyprinus carpio (common carp): 109108186
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Entry
109108186 CDS
T05134
Symbol
otx1
Name
(RefSeq) homeobox protein OTX1 B
KO
K09326
homeobox protein OTX1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109108186 (otx1)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109108186 (otx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
109108186
NCBI-ProteinID:
XP_018976902
Ensembl:
ENSCCRG00000022490
LinkDB
All DBs
Position
A17
Genome browser
AA seq
322 aa
AA seq
DB search
MMSYLKQPPYAMNGLGLSGAAMDLLHPSVGYPATPRKQRRERTTFTRSQLDILEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSSTKARPAKKKSSPTRESTG
SESSGQFTPPAVSSAGSSSSSSSSTNNTGITSTSTSISTVSSIWSPAISPGSAPPSVSLP
EPVAPSNASCMQRSVSGTPSSSYPMPYNQTTGYSQGYPTPSSSYFSGVDCGSYLAPMHSH
HHPHQLSPMTASSMPTHPHHHISQSSGHHHHHHQAYSGTGLAFNSSDCLDYKEQTASSWK
LNFNTTDCLDYKDQASWRFQVL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacagcccccctacgccatgaacggcctggggctgagcggcgca
gccatggacctactgcacccgtccgtcggatacccagcaacacccagaaagcagcggcgg
gaaagaacgacatttacgcgctcacagcttgacattctcgaagcgctttttgccaaaact
cgttacccggacatttttatgagagaagaggtggcgctgaagatcaaccttcccgagtcc
agagttcaggtgtggtttaagaatcggcgtgctaaatgtcgtcagcagcagcagagtggc
agcagcactaaagctcggcccgcaaagaagaaatcctcacccactcgggagagcacgggc
tcagagagcagcggccagtttacccctcctgccgtctccagcgcaggctcttcctcctcc
tcctcttcttcaaccaataacacaggcatcactagcacctctacctctatcagtactgtg
tcatcaatctggagccctgccatttctccaggctctgcacccccgtctgtctccctgccg
gagcccgttgctccctcaaatgcctcctgcatgcagcgctccgtctcgggcacacccagc
tcctcataccccatgccctacaaccagaccaccggttacagccagggctacccgactcct
tccagttcttacttcagtggagtggactgcggctcctatctggcccccatgcactctcac
caccaccctcatcagctcagccccatgacggcgtcatccatgcccacgcacccccaccac
cacatcagtcagtcctcaggacatcaccaccatcatcaccaggcatacagtggcactggc
ctggcgttcaattcttctgactgcctggattacaaggagcaaacggcctcctcctggaag
ctcaacttcaacactacagactgtttggactacaaagaccaagcgtcctggaggttccaa
gtcttgtga
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