Cyprinus carpio (common carp): 109108533
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Entry
109108533 CDS
T05134
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109108533 (snx13)
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109108533 (snx13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
LID
Rep3_C
Motif
Other DBs
NCBI-GeneID:
109108533
NCBI-ProteinID:
XP_042632118
UniProt:
A0A9Q9Z4Y5
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All DBs
Position
A19:complement(6878646..6911844)
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AA seq
985 aa
AA seq
DB search
MFAEASLSIWGWGGLGVVLFLITFGPFAIFYLAFYILCFIGGGFVVLLLFGKINSEKHLE
RCEHSYLPSTQSAILKVLEEMKSESKPIKIDRRLTGSSIIDEPLQQVIQFALRDYIQYWY
YTLSDDETFLLEIRQTVQNALVEFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQERLN
EREDPKQRDAPEELLDSFFEAEVEMERKICRDVVCMSRKDEEGFLRDLCEVLLYLLLPPG
DFHNKNMRYLLKEVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYEAFLNILKLTDK
VAELEAVKDKVLEELQYLRSLDTGGDDINFIKNQINSLLFVKKICETRIQRLQSGKEVDT
LKLAANFGKLCVIPLEHIIAHNIALQFFMDYMQHMGGQAILFFWLTVEGYRVTAQQQLEV
LQNSQRDGKIQSSQTTKGLLRSAALGVYDQYLSEKASPRVEVDEASVTRLAQKLNKEDPT
PEIFDEIQKKVYDMMLRDERFYPSFKQHPLYVRMLAELDMLKEPSYMGSDHGDGESFNGS
PTGSINLSLDDLSSGSVDESVQLHAFISDTGVCNDHGKTYALYTLTVIRKNSDGSEDIWK
TYRRYSDFHDFHMRITEQFETLGPILKLPGKKTFNNMDREFLEKRKKDLNSYLQLLLNPE
MVKACPMLMPHVYDFLENKAYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKSLPDSLAEG
VSKVSADMGRMSEKLGQDIKHSIFKVPPLIAKSDIDPEHCRISAQLDDNVDDNIPLRVML
LLMDEVFDLKERNQWLRRNIKNLLQQLIKATSGDTINRCHGHTLIMTRIRLYFCCLFNGQ
HLFSLHCRKIVDHVDYMTSPEQVSDYVKRFRDSYWPNGILAETPPHRDKSLRMRTRVAAK
TTLLGIMPDELKHIIGAETTRKGILRVFDMFQHQPLNRRLACVFLEGYLETLFPQYKFPE
LFVKLHSRSPRVLRYSQKLRSLHKR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtccatctggggatgggggggtctgggagtcgtcctcttc
ctcatcacatttggaccttttgccattttttatctggccttctacatcctctgtttcatt
ggcgggggttttgtagtgcttcttttatttggaaagataaactcagagaaacacctggaa
aggtgtgaacactcctacctgccatcgacacagtcagccatactgaaggttttggaggag
atgaaatcagagtccaaacccataaagatcgatcggcgtctgacaggatccagtatcata
gatgagccactgcagcaggtcatccagtttgctttgagggactatatccagtactggtat
tacacattgagtgatgatgaaacgttcctcttggagatccgtcagacggtccagaacgcc
ctcgttgagttctccaccaggtctaaagaggtggactggcagccgtatttcaccaccaga
ctggtggatgatttcgcgactcatctgcgtgttttcaggaaagctcaggagaggctaaat
gagagagaagatccgaaacaacgtgacgctccggaagagttgttggactcgttttttgag
gcggaggtggaaatggagaggaagatttgtagagatgttgtctgcatgtcacgcaaggat
gaagaaggtttcctgcgggatctctgtgaagtgctgctatacctgttactacctcctgga
gatttccacaacaagaatatgagatacttactcaaagaggttttggccagaggagttctg
ctgcccttaattaaccagctgagtgaccctgattacatcaatcagttcgtcatctggatg
attcgtgactccagctgtaactacgaggccttcttgaacatcttaaagctgacggacaaa
gtggccgagctggaggccgtcaaagacaaagtcctggaggagcttcagtacctccgatct
ctggacacgggaggagacgatatcaacttcataaagaatcaaatcaacagtttgctgttt
gtgaagaaaatctgtgaaacacggatacaacggctacagtcagggaaggaagttgacact
ttgaaactcgccgctaattttgggaagttgtgtgtgattccgttggaacatataatagca
cacaacatcgcgctgcagttctttatggactacatgcagcacatgggcggtcaggcgatc
ctgttcttctggctgacggtggagggctatcgggtcacggcgcagcagcagctggaggtc
ttacagaacagccagagagacgggaagattcagagcagccagaccaccaaaggcctgctg
agatccgccgcgctcggcgtctacgaccagtacctgtccgagaaggcctctcctcgggtg
gaggtggacgaagcgtctgtaaccagactggctcagaaactcaataaagaggatcccaca
ccagaaatatttgatgaaatccagaaaaaggtgtatgacatgatgttgcgggatgagagg
ttttacccgtcgtttaagcagcacccgctgtatgtgcggatgctggccgagctggacatg
ctgaaagagcccagttacatggggtcagaccacggggacggagagtcgttcaacgggtct
ccaacaggaagcattaatttatcattagatgatctcagcagcgggagcgtggatgaatct
gttcagcttcatgcctttatctctgatacgggcgtgtgtaacgatcacgggaagacgtac
gccctctataccctcaccgtcatacgcaagaactccgacggcagcgaggacatctggaag
acgtaccgccgctacagcgatttccacgacttccacatgcgcatcacggagcagtttgag
acccttggtccaattctcaagcttcctggtaaaaagacctttaacaacatggacagggag
tttttggagaagaggaagaaggacctgaactcttatttacagctgctgctgaatcctgag
atggtgaaggcctgtcccatgctgatgccccacgtctatgacttcctggagaacaaagcc
tacagcaagggcaaaggagacttcgcacgcaagatggacacgtttgtgaatcctctccgg
agctccatgcggaatgtgtccaatgccgtgaagtcactgccggacagcctggccgaggga
gtgtccaaagtctcggcggacatgggccgcatgtcagagaaacttggccaggatattaaa
cactccatatttaaggtgcctcctttaattgcaaagtctgacattgatcccgaacactgc
cgcatctcggcccagctggacgacaatgtggatgataatattccactgagggtgatgttg
ctgttgatggacgaggtgtttgatctgaaggagagaaatcagtggctgcgcagaaacatc
aaaaacctcctgcagcagctcatcaaagccacgtctggagacaccatcaacaggtgccac
ggacacacactcattatgactcgcatacggttgtatttctgctgtctgttcaacggtcaa
catttattttcactccactgcaggaaaattgtcgatcacgtcgactacatgacctcgcct
gagcaagtgtctgattacgtgaagagattcagagactcttactggccaaacgggattctg
gccgagacgccgccccacagagacaaaagcttacgcatgaggacacgagtcgccgctaag
accacactcctgggtatcatgccagatgagctgaagcacatcattggggcagaaaccaca
cggaaaggcatcctgcgcgtctttgacatgttccagcatcaaccgctgaaccgccggctg
gcctgcgtctttctggagggctacctggagaccttgtttcctcagtacaagttccccgag
ctgttcgtgaagctccactcgcgctcgccacgcgtgctcagatattcacagaaattgcgc
agcttgcacaagaggtga
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