Cyprinus carpio (common carp): 109108661
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Entry
109108661 CDS
T05134
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109108661
03036 Chromosome and associated proteins [BR:
ccar03036
]
109108661
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109108661
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109108661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
109108661
NCBI-ProteinID:
XP_042599970
Ensembl:
ENSCCRG00000023645
UniProt:
A0A9Q9XDS3
LinkDB
All DBs
Position
B18:complement(16235164..16242501)
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AA seq
783 aa
AA seq
DB search
MEGGPTEAVVEDAGDAFKAKECKTYQRRREDEDVGAELLQAAGLEQAHVEGEPVVEAVNS
SVEMMVIDSLDPALLQMKTEVMEAAVGAPVGVAGAAHEATVTTVDDTQIITLQVVNMEEQ
QLGLGELQLVQVPVSAVPVTATTVEELQGTLVDAMPKDGEPVICHTLPLPEGFQVVKVGA
NGEVETVEQDELQAQDDQPPQQEEEDMVEAQNEDPAWSKDPDYTPPVKKAKKTKKSKLRY
NTEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSY
TCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVT
SGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYK
LKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG
VHLRKQHSYIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMH
KRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTSFVCTKCGKTFTRRNTMARH
AEHCNGMDSAEGENGTPTKRGRGGRKRKMRSRKDDDDEDSDEHGEPDLDDIDEDEDEEFL
DDDQMDVEQAPPSIPIPAPAEPPVKRKRGRPPKNAPKASPTKSVAKTTTAAAIIQVEDES
TGAIENIIVKKEPEGADAAAAAQPVVEEVEAVEAGVETVQLTVPEAAPNGDLTPEMILSM
MDR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggaccgactgaggcagtggtggaagatgcaggggatgctttcaaggccaag
gaatgcaagacataccaaaggcgacgagaagatgaggacgtgggagctgaattgctgcag
gctgctgggttagagcaagcccatgttgaaggagagcctgtggtggaggctgtcaacagc
agtgtggagatgatggtgatagactccctagaccctgccctgctccagatgaagacagaa
gtcatggaggctgctgtcggtgcacctgttggtgttgctggtgctgcccatgaagccaca
gtcactactgtcgacgacactcagatcatcaccctccaggtggtgaacatggaggagcag
cagttgggcttgggagagctacagctggtgcaggtgcctgtttcagctgtgcctgtcact
gccaccactgtagaagagctgcaggggacgctggtggacgccatgcctaaagatggggag
ccggtcatctgtcacaccttgccattgcctgagggcttccaggtggtcaaagtgggtgca
aatggagaagtggaaactgtggagcaagatgagctccaggcccaagatgatcagcctcca
cagcaggaggaggaggatatggttgaagcccaaaatgaagaccccgcctggtccaaagat
ccagactacacaccccctgttaaaaaggccaaaaagactaagaaaagcaagctgcgttac
aacacagagggcgataaagacatggatgtgtctgtgtatgactttgaggaggagcagcag
gagggactgctatctgaagtcaatgctgagaaagttgtgggtaacatgaaaccgcccaaa
ccaaccaaaatcaagaagaaaggtgttaagaagacattccagtgtgagctgtgcagttac
acttgcccgcgccgttccaatctggaccgccacatgaagagccacacggatgagaggcct
cataagtgccatctttgtggacgagccttcaggactgtgacattgctgaggaaccacctc
aacacccacacaggcaccagaccacataagtgcactgactgtgacatggcattcgtcacc
agtggagagctggtgcgacaccgacgctacaagcacactcatgagaaaccattcaagtgc
tccatgtgtgactatgccagtgtagaggttagcaagctgaagcgccacattcgctcccac
actggagagcgtccgtttcagtgcagtctgtgcagttatgccagcagagatacctataag
ctgaagagacacatgaggacccactcaggagagaagccctatgagtgctatatctgtcat
gcacgttttacccagagtggtaccatgaagatgcacatactacagaagcacacagaaaat
gtggcgaaatttcactgcccccactgcgacacggttattgcccgcaagagcgatcttggt
gtgcatctccgtaagcagcattcctacattgagcagggcaggaagtgccgctactgtgat
gcggtgttccatgagcgctatgctctcatccagcatcagaagtcccacaaaaatgagaaa
cgctttaaatgtgatcagtgtgactatgcatgccgtcaggagcgtcacatggtcatgcac
aagcgcacccatactggggagaagccatacgcctgcagccaatgtgagaaaactttcaga
cagaaacagctgctggacatgcactttcggcgctatcacgaccccaactttgtacccaca
tcctttgtatgcaccaagtgtggcaagaccttcactcgcaggaataccatggccagacat
gcagagcactgcaatggtatggattcagctgaaggagagaatggaacgccaaccaaaagg
ggccgtggaggccgaaagaggaagatgcgctctagaaaggatgatgatgatgaagatagc
gatgagcatggagaacctgaccttgatgacattgacgaagatgaagatgaggagtttctt
gatgatgaccagatggatgtggaacaggctccacccagcattcccatccctgcaccagct
gaacctcccgtcaagaggaaacgcggcagaccccctaagaacgcacccaaggcttctcct
accaagtctgtcgccaaaaccaccacagctgctgccattatccaggtggaagatgaaagc
acaggggccattgagaacatcatcgtgaagaaggagcccgagggtgctgatgcagctgca
gctgcccagccagtggtggaggaagtggaggctgtcgaggctggtgtagaaacagtgcag
ctaacggtccctgaagcggcgcctaatggtgatcttactcctgaaatgatccttagcatg
atggaccggtga
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