Cyprinus carpio (common carp): 109108667
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Entry
109108667 CDS
T05134
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109108667
03036 Chromosome and associated proteins [BR:
ccar03036
]
109108667
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109108667
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109108667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
109108667
NCBI-ProteinID:
XP_018977300
Ensembl:
ENSCCRG00000023645
UniProt:
A0A9Q9VIP2
LinkDB
All DBs
Position
A18:complement(18560100..18574844)
Genome browser
AA seq
787 aa
AA seq
DB search
MEGGPTEAVVEDAGDAFKPKECKTYQRRREDEEVGAELLQAAVLEQAQAEGEPVVEAVNS
SVEMMVMDSLDPALLQMKTEVMEAAVGAPVGVAGAAHEATVTTVDDTQIITLQVVNMEEQ
QLGLGELQLVQVPVSAVPVTAATVEELQGTLVDATAMPKDGEPVICHTLPLPEGFQVVKV
GANGEVETVEQDELQAQDNQPPQQEEEDMVEAQNEDPTWSKDPDYTPPVKKAKKTKKSKL
RYNTEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELC
SYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAF
VTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDT
YKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD
LGVHLRKQHSYIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMV
MHKRTHTGEKPYSCSQCEKTFRQKQLLDMHFRRYHDPNFVPTSFVCTKCGKTFTRRNTMA
RHAENCNGMDSGDGENGAPPKRGRGGRKRKMRSRKDDDDDDDSDEHGEPDLDDIDEEEDD
ELFDDDQMDVVQAPPSVPIPAPAEPPVKRKRGRPPKNAPKASPTKSVAKTTTAAAAIIQV
EDESTGAIENIIVKKEPEGIDAASAAQPVVEEVEAVEAGVETVQLAIPEAAPNGDLTPEM
ILSMMDR
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggaccgactgaggcagtggtggaagatgcaggggatgctttcaagcccaag
gaatgtaagacataccaaaggcgacgagaagatgaggaagtgggtgctgaattgctgcag
gctgctgtgttagagcaagcccaggctgaaggagagcctgtggtggaagctgtcaacagc
agtgtggagatgatggtgatggactccctggaccctgccctgctccagatgaagacagaa
gtcatggaggctgctgtcggtgcacctgttggtgtggctggtgctgctcatgaagccacg
gtcaccacagttgatgatactcagatcatcaccctgcaggtggtaaacatggaagagcag
cagttgggcttgggtgagctgcagctggtgcaggtgcccgtttcagcggtgccggtcact
gccgctactgtggaagagctgcaggggacgctagtggatgccactgccatgcctaaagat
ggggagccggtcatctgtcacaccctgccgttgcctgaaggcttccaggtggtcaaagtg
ggtgcaaacggagaagtggaaactgtggagcaagatgagctccaggcccaagataatcaa
cctccacagcaggaggaggaggatatggttgaagcccaaaatgaagaccccacctggtcc
aaagatccagactacacacctcctgttaaaaaggccaagaagactaagaaaagcaagcta
cgttataacacagagggcgataaagacatggacgtatctgtgtatgactttgaggaggag
cagcaggagggactgctctctgaagtcaatgctgagaaagttgtgggtaacatgaaaccg
cccaaaccaaccaaaattaagaagaaaggtgttaaaaagacattccagtgtgagctgtgc
agttacacttgcccgcgccgttccaatctggaccgccacatgaagagccacacggatgag
aggcctcacaagtgccatctttgtggacgagccttcaggactgtgacgttgctgaggaac
cacctcaacacccacacaggcaccagaccacataagtgcactgactgcgacatggccttc
gtcaccagtggagagctggtgcgacaccgacgctacaagcacactcatgagaaaccattc
aagtgctccatgtgtgactatgccagtgtagaggttagcaagctgaagcgccacattcgc
tcccacactggagagcgtccgttccagtgcagtctgtgcagttatgccagcagagatacc
tataagctgaagagacacatgaggacccactcaggagagaagccctatgagtgctatatc
tgtcatgcacgttttactcagagtggtaccatgaagatgcacatactgcagaagcacaca
gaaaatgtggcaaaatttcactgcccccactgcgacaccgttattgcccgcaagagtgat
cttggtgtacatctccgtaagcagcattcctacattgagcagggaaggaagtgccgttac
tgtgatgcagtgttccatgagcgctacgcactcatccagcatcagaagtcccacaaaaat
gagaaacgcttcaagtgtgatcagtgtgactatgcatgccgtcaggagcgtcacatggtc
atgcacaagcgtacccataccggggagaagccttattcctgcagccaatgtgagaaaact
ttcagacagaaacagctcctggacatgcactttcggcgctatcacgaccccaattttgta
cccacatcctttgtatgcaccaagtgcggcaagaccttcactcgcaggaataccatggcc
agacatgcagagaactgcaatggtatggattctggtgatggagagaatggagctccaccc
aaaaggggccgtggaggccgaaagaggaaaatgcgctctagaaaggatgatgatgatgat
gatgatagtgatgagcatggagaacctgaccttgatgacattgacgaagaggaagatgat
gagctatttgatgatgaccagatggatgtggtacaggctccacccagtgttcctatccct
gcgccagccgaacctcctgtcaagaggaaacgtggcagacccccaaagaatgcacccaag
gcttctcctaccaagtctgtcgccaaaaccaccacagcagctgctgccattatccaggtc
gaggatgaaagcacaggggccatcgagaacatcatcgtgaagaaggagcctgagggcatt
gatgcagcttcagctgcccagccagtggtggaggaagtggaggctgtcgaggctggtgta
gaaacagtgcagctagccatccctgaagctgcgccgaacggtgatcttactcctgaaatg
atccttagcatgatggaccggtga
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integrated database retrieval system
