Cyprinus carpio (common carp): 109108683
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Entry
109108683 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109108683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109108683
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109108683
mRNA degradation factors
5'-3' decay
Decapping complex
109108683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EDC4L
WD40_Prp19
WDR55
Pdc1_Ge1
Phage_min_cap2
EIF3I
Motif
Other DBs
NCBI-GeneID:
109108683
NCBI-ProteinID:
XP_042631174
Ensembl:
ENSCCRG00000024660
UniProt:
A0A9Q9Z357
LinkDB
All DBs
Position
A18:18717194..18741255
Genome browser
AA seq
1392 aa
AA seq
DB search
MASSSNMDIEGATQHLRDILKLDRPGNSAEPSLVESQRKPSFNGELNGVLGADLLGAGGL
AAVVETTTHNSDKLNGQDMQTICLSGDDGSTCVPIRANNVEIVSSRDSSIDSKARGSNKV
KIQPVAKYDWEHKYYYGNLIAVSNSYLAYAIRGANNHSMIRVLRLGSTERSLLKGFTGAV
TDLAFAHLDSTLLGCVDEAGNMFIWQLTSHSSKIQDEVLVHIRRPEDTPLNSNRRLIWCP
FILEDNDENPEDACQTLALLHEDRAEVWDLDILRSNNSSWPVDATDLKEGFITIRGHTAR
ISEGALSPDGTVLATASHDGYVKFWQIYIEGQDQPRCLHEWQPHNGRPLSCLLFCDDHKK
QDPEXVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPFNSSVLPSLKASLDLSAE
FLILSDVQRKVLYVMELLQDQEQGRASFTAVSEFLLTHPVLSFGIQDVARARLRHTEVLP
PDEESESMTTEGNQGPSESKSGIQIKLYCVHTKSLQDVQIWFQPNQGASSSLFMPQSGSQ
DGFGFSDPLADLNVEAMSSDKESGDSGSQNDLSKILALPTPADFMSPAPSALPKLMTPDA
FMTPSTSMPASPGSSASSLTIVTAMSSSDSAARGGDDLAQSPKMSVECGNSSLTLSASAG
SPRSNSILISGLGENIQVSPPNPPLSLDLQAIDPMVVPQASPTRARSPDVISSASTAMSQ
DIPEIASETLQRGLSGPATDSVPVLHSDSMASAASVLHLLSPRARSSAEHSLLPLELGAA
SVDGEQRLNNTPSLLETALSQENAVAAGGSCSDSSVNHTWPAAPDITRETRNSLRDNGLG
DCSREEIKDRHISSPYHRRTYHLTQNDSQDASAEQSDHDDEVASLASSSGNCGPRSSHRL
PVKDWKTSPRSSPKLKRKSKKDEGESSQSRQIENQMSTEVQDELLQMLRSQQREIAELRQ
NQMDLLQRVTSHMDAVQSSIMAHIEHAMLAQQEQEQRRMERILAEGQSRNQQLQDQLVQQ
LVQTLNNSLCNRLDKVLREEIKKTVPQTISKSLEPVTSQMSSTIAAKLTAVEGTLKENVT
KVVKSKNTTDAIGRAAAEAMQGPIQSAYKETFQSIVLPVFERGCQSMFQQINDSFKQGTH
EYIQQLETHIKNRKQQDQDARDPVIGQLQQMIDTLQSSQDQLATTVTASVCSDVQRQLHM
IVGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPVPSAHLDYQAQQA
SILQLLQQGQLNEAFQQALSAADLNLVLYVCETIDSQQVFGQQPCPLHQAVLLSLIQQLS
TNLSTRTELKISYLEDAVMNLDHGDPVTRDHMSAVLSQVRQKLLHFLQQDAQSPLSKRAR
RLMMMLQGLVSH
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagttccaacatggacatagagggcgcgacccagcaccttcgggacatctta
aaactggatcgtcccggtaattcggccgagccctctttggtagagagccagagaaaacca
tctttcaatggagagctgaatggtgttcttggagcggatcttttgggagcaggaggactt
gccgcagtggtggagacaactactcacaactcagacaaacttaatggacaggacatgcag
actatctgtctttcaggagacgatggctccacctgtgtccccatcagagcaaacaatgtg
gaaattgtgtccagtcgtgactctagtattgacagtaaagctcgtggcagcaacaaggtt
aaaattcagccagtggccaaatatgactgggaacacaaatactactacggcaatttaata
gccgtgtccaactcatacttggcttatgccatcagaggtgcaaacaatcattctatgatc
cgagtgctgcggctgggatcaaccgagcgttcactgctgaagggcttcacaggagcagtc
acagaccttgctttcgcccacttggactccaccctgttgggctgcgtggacgaggctgga
aacatgtttatttggcaactcactagccacagcagcaaaatacaagatgaagtgttagtt
cacatccgaaggcctgaggacactccgctaaattccaaccgcagactcatctggtgtccc
ttcatcctggaggacaatgatgagaacccagaggatgcgtgtcagacattggcactcctt
catgaagaccgagctgaggtttgggaccttgacatcctccgatccaataacagctcatgg
cctgtggatgccactgacctgaaggagggtttcatcaccattagaggacacacagcacgc
attagtgagggagcgctgtcccctgatggcacggtcttggccacagccagtcatgatgga
tatgtaaagttttggcaaatctacattgaaggacaggaccagcccagatgcctgcatgaa
tggcagccgcataatggacggcctctttcctgtcttctcttttgtgatgaccacaagaag
caagacccagagtaagttcctttctggcgcttcctgatcactggagctgatcagaaccag
gaactgaagatgtggtgcacagtgtcatggacgtgtctacaaaccatcaggttttctcca
gatccattcaacagcagtgtgctacccagcctgaaggccagtttggacctgtctgcagaa
tttctcattctcagtgatgttcagaggaaggtgttgtacgtcatggagctgctacaggat
caggaacaaggccgtgccagcttcactgcagtttcagagtttctgcttacacaccctgtg
ctcagcttcggaatacaggatgtcgcccgcgcccgactgcgccacactgaggtccttccc
cctgatgaggaaagcgaaagcatgacgacagaaggaaaccagggaccctctgagtccaaa
tcaggaatccagattaaactctactgtgtgcatacaaaatcactacaggatgtgcagatc
tggttccagcccaatcagggggcgtcatcttccctcttcatgcctcagtctgggtcacaa
gatggctttggtttttctgacccactggctgatcttaacgtggaggcaatgagctctgat
aaggagtctggtgatagtggatcgcagaatgacctgagtaagattctggctcttccaact
ccagctgacttcatgagtcctgccccatcagccttgcccaaactcatgaccccagatgcc
ttcatgacgcccagcacctccatgcctgcttctcctggcagcagtgcaagcagcctgacc
atagtcacggccatgagcagctcagatagtgctgcaagaggcggagatgatctggcccag
agccctaaaatgtctgttgaatgtggcaacagcagcttgactctgagtgccagcgcaggc
agtccaagatccaactctatcctcatctcaggccttggggaaaatatccaggtttcccct
ccaaaccctcctctctccctggatctccaggccatagaccccatggttgtcccccaggcc
tctccgaccagagctcgctctccagatgtcatctcctctgcttctacggcaatgtcccag
gacatccctgagatcgcctcagagaccctgcagagggggctgtctggtcccgctactgac
tcggtccctgtcctgcattctgacagcatggcatcagccgcatcagtcctccacctgttg
tctcctagagcccggagcagtgctgagcacagtttgctgcctctcgaattgggcgcagca
tctgtggatggagaacagagactcaataacacaccctccctgctggagacggctctgtca
caggagaacgcggttgcagctggaggatcctgttctgacagcagcgtgaaccacacctgg
cccgcagcacctgatatcacgcgagaaactcgcaacagcctcagagacaatggtttggga
gactgctctagggaggaaataaaggacagacacatttcgtctccctaccacaggcgcact
tatcacctgactcagaatgacagtcaagatgcaagtgcagagcagagtgatcatgatgat
gaggttgccagtctggcctcttcctcaggaaactgtggccctcgctcctctcacagactt
cccgtaaaggactggaaaacatctccccgcagctcccctaagctcaagaggaagagcaag
aaggatgaaggagagtcctcacagtctagacagattgagaaccagatgagcacagaggtg
caggatgagcttctacagatgttacggagccagcaaagggagatcgctgagctgagacag
aaccagatggaccttctgcagagagtcaccagtcacatggacgctgtacagagctccatc
atggctcacattgagcacgccatgttggctcagcaggagcaagaacagagaagaatggag
cgaattctggctgaaggacaaagccggaaccaacagctccaggaccagctagttcagcag
cttgtccagacactgaacaacagtctctgcaatcggctagacaaagttttgcgtgaagaa
attaagaagaccgtcccacagaccatttcgaagagtctagaacctgtgaccagccagatg
agcagcaccattgctgccaagttaaccgcagtggaaggaacactgaaggaaaatgtcacc
aaagttgttaaatccaagaacactacggatgctatcggccgtgctgctgctgaggccatg
cagggccccatccagtcagcctacaaagagaccttccagagcatcgtgctgcccgtgttt
gagagaggctgccagtccatgtttcagcaaatcaatgacagcttcaaacagggaacccac
gagtacatccaacagctggagacacacattaagaacaggaaacagcaggaccaggatgca
cgggatcccgtgattggccagctgcaacagatgattgacacgctccagagttctcaagac
cagctggccaccaccgtgacggccagcgtgtgctctgacgtacagcgtcagctccacatg
atcgtgggaaatctgcaggactcaatcctgacgcaggtacagcgcatagtgaagggagag
gtgagtctggccatgaaggagcagcaggcagctgtcacctccagcatcatgcaggccatg
cgctcggccgcaggaacacctgtaccctccgcacatctggactaccaggcccagcaggcc
agcatactgcagttactacagcagggccagctcaatgaggccttccaacaggctttatcc
gcagcagacttgaatctggtgctgtacgtgtgtgagactattgactcccagcaagtgttt
ggccagcagccctgtccactgcatcaggccgtccttctgtctctcatccagcagctctcc
accaacctgagcacacgcacagaactcaagatcagctatcttgaagatgctgtaatgaac
ctggatcatggagatccagtcaccagagaccacatgtctgcagtgctgtcccaggtacga
cagaagctcttacacttcctgcagcaggacgcccaaagccctctgagcaagcgcgcacgg
cgcctcatgatgatgctgcagggcctggtcagtcactag
DBGET
integrated database retrieval system
