Cyprinus carpio (common carp): 109108840
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Entry
109108840 CDS
T05134
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109108840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109108840
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
109108840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
109108840
NCBI-ProteinID:
XP_018977500
Ensembl:
ENSCCRG00000010303
UniProt:
A0A8C2JQV7
LinkDB
All DBs
Position
B18:16007425..16010680
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AA seq
228 aa
AA seq
DB search
MSVVPPNRSSTGWPRGVNQFGNKYISQPAKPLTLERTINLYPLTNYTFGTKEPLYEKDSS
VAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVE
GLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQL
QEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttgtacctcctaatcgatcatctaccggttggcctcgtggagtaaatcagttc
ggcaataaatacattagccagccggctaaaccgctcaccctggagagaacaatcaatcta
taccctttaacaaattacacattcggcaccaaagagccactctatgagaaggacagctcg
gtagccgcacgctttcagcgaatgcgggaagaatttgagaaaattgggatgcggcggaca
gtggaaggggttctgatcgttcacgagcacagactccctcacgtgctgctgctgcagctg
ggaaccaccttcttcaagcttcccgggggtgagttgaaccctggagaggatgaagtggag
gggctgaagcgactaatgactgagattttggggcgtcaggatggagtgaaacaggactgg
gtcattgatgactgtattgggaactggtggagacctaactttgaaccacctcagtaccct
tatattccagcacacatcactaagcctaaagaacataagaagctttttctagtacagctg
caagagaaagcattgtttgctgtgcctaagaactacaagctggtggctgcccccttgttt
gagctttatgataatgctcctggctatggcccaataatatccagtctaccacagctactg
agcaggtttaacttcatctacaattga
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integrated database retrieval system
