Cyprinus carpio (common carp): 109109093
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Entry
109109093 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03020
RNA polymerase
ccar04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109109093
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109109093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109109093
Enzymes [BR:
ccar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109109093
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109109093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
109109093
NCBI-ProteinID:
XP_042600176
Ensembl:
ENSCCRG00000004228
UniProt:
A0A9Q9XFH5
LinkDB
All DBs
Position
B18:19441578..19466924
Genome browser
AA seq
1141 aa
AA seq
DB search
MLQEEFGEMTPQQLAAPVDTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKAN
EKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRG
SQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILIQE
QLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIFKA
MGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQTQALKYIGNKVRCQSMWGGPKK
TKMEETRELLASTILTHFTCMTFXNELKVPVKEFNFRAKCIYLAVMVCRVILAQGDNKVD
DRDYYGNKRLELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQIT
NGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQ
PSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLAFNLGVEDVNLLCGEELS
YPTVFLVFLNGNILGVIREHQKLVYTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRL
CRPYIIVKNGQPTVKNKHIEELSQGYRTFEDFLHESLVEYLDVNEENDCNIALYEHMISK
DTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLL
AYPQRPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVY
KNAKCTLRRYTNQTFDKVMGPMLDAETRKPIWRHSILDADGICSPGERVENKQVLVNKSM
PTITQTPLEGSAQPGQPQYRDVPVTYKGATDSYIEKVMISSNAEDAFLIKILLRQTRRPE
IGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAG
VLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL
KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS
DAFEVDVCDQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYN
E
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaggaggagtttggggaaatgactccccagcagctcgctgctcccgtcgacact
gtggaggaaaagtggaagctgcttccagcctttttgaaggttaaaggcttagttaagcag
cacatcgattccttcaattacttcatcaatgttgagataaaaaagatcatgaaggcaaac
gagaagatcacaagtgatgctgacccaatgtggtatttgaaatatctcaatatctatgtt
ggcatgcctgatgtagaagaaagctttaatgtaaccagaccagtgtcaccacatgagtgt
cgtctgagagatatgacctattcagcccccatcactgtggacatagagtacacccgaggc
agccagagaattattcgcaatgctctcccaatcggaaggatgccaataatgctgcgaagc
tccaactgtgtattaacaggaaagacgccgatggagttctccaagcttaatgaatgtcct
ctggatccaggtggttatttcattgtgaaagggcaagaaaaggtcattctcattcaggaa
cagttatccaagaaccgcatcatcgtggagcaagatcgcaaaggtgctgtgggagcctcg
gtcaccagctctactcatgagaaaaagagcagaaccaacatgattgtgaaacagggacgc
ttttacctgaagcacaacaccctctctgaagatgcaccgattgctattatctttaaggcc
atgggagtggagagcgatcaggagatagttcagatgattggcacggaggaacatgtcatg
gctgcattcggtcccagtttggaggaatgtcagaaggcccaaatattcacccaaactcag
gcactaaaatacattggtaataaagtgaggtgtcagagtatgtggggcggccctaagaaa
accaagatggaagagaccagagagctgttagcttctactatcctcacccattttacctgt
atgacattttaaaatgaacttaaagtgcccgttaaagagtttaactttcgagctaagtgt
atctatcttgctgtgatggtgtgtagagtgattctcgctcaaggggacaacaaagtggac
gatcgtgattactatggaaacaaacgtctggagttggctggccagctcctgtctctgctg
tttgaggatctgtttaagaagttcaactctgagctgaagaagatcgctgaccagatcatc
cctaaacagagagcagctcagtttgatgtggtgaagcacatgagacaggaccagatcact
aacggcatggttaacgccatctctactgggaactggtccctaaagaggtttaagatggac
aggcagggtgtgactcaggttctctcccgcctctccttcatctcagccctgggcatgatg
accaggatctcctctcagtttgagaaaaccaggaaagttagcggtcctcgctccctccag
ccctcccagtggggcatgctgtgcccctcagacacacctgaaggagaggcttgtggtctg
gttaaaaatctggctctgatgacccacatcactactgacatggaggacggccccatcgtc
aagctggccttcaacctgggagtggaggacgtcaaccttctgtgtggagaggagttgtcc
taccccactgtcttcctcgtcttcctcaacggtaacattcttggagtgatcagagagcat
cagaagttggtctacaccttcagactcatgcgtagagcaggttttataaacgagtttgta
tccatttcaaccaatttgaccgaccgctgcgtgtatatttcttctgatgggggccgtttg
tgcagaccctacatcattgtaaagaatggacagccaactgtgaagaacaaacacattgag
gaattgtctcagggctacagaacgtttgaggacttccttcatgagagtctggtggagtat
ttggatgtaaatgaagaaaatgactgtaacattgctttatatgagcatatgatctccaag
gacacgacccatttggagattgaaccgttcacgctgctgggggtctgcgctggtttgatt
ccttaccctcatcataaccagtcccccagaaacacctaccagtgtgctatgggcaagcag
gctatgggtactattggctataaccagaggaaccgaatagacaccctgatgtacctgcta
gcgtacccacagaggcctatggtgaagacgaagaccatcgagctgattgactttgagaag
ctgcccgcaggccagaatgctactgtggctgtaatgagctacagtggctatgatatagaa
gatgccctggtgctcaacaaggcctctcttgacagaggctttggtagatgtctagtgtac
aagaacgctaagtgcaccttaaggcggtacactaaccagaccttcgacaaagtgatgggt
ccaatgctggatgcggaaacacgcaagcccatttggagacacagcatcctggatgctgat
ggcatctgctcgcctggtgagagggttgaaaacaagcaggtgctggtgaataagtcaatg
cccaccatcacccaaacgccactggagggcagtgcccagccaggccaaccacaatacaga
gacgtgccagtcacgtacaaaggagcgacagactcctacattgagaaggtgatgatctcc
tccaatgctgaggatgccttcttgatcaagatcctgcttaggcaaacacgtagaccagag
atcggagacaagttcagcagtcgacatggacagaaaggtgtgtgtggattgatcgttcct
caagaggacatgcccttctgtgactcgggaatctgccctgacatcatcatgaaccctcat
ggttatccctccagaatgactgttgggaagctgattgagctattggctggtaaagcaggg
gtgctggatggacgttttcactacggcactgccttcggtggcagtaaagtgaaggacgtg
tgtgaggatcttattcgctatggatacaattaccagggcaaggattatgtcacctcgggc
atcacaggggaacctctggaagcctacatctacttcggtccagtctattatcagaaactg
aagcacatggtgctggataaaatgcatgccagagcacgtggtccgagagcagtactcacc
aggcagcccacagagggtcgttctagggatggtggtctccgtctgggagagatggaacga
gactgtctcattggctatggagccagtatgctgctgcttgagcgactgatgatctccagt
gatgcttttgaggtggacgtgtgtgaccaatgtggcttgctgggatattcaggatggtgt
cattactgcaagtcttcgtgccatgtgtcgtctctacgaattccatatgcctgcaaactg
ctcttccaagaactgcaatccatgaacatcatccctcgcctcaaactggctcgatacaac
gagtga
DBGET
integrated database retrieval system
