Cyprinus carpio (common carp): 109109387
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Entry
109109387 CDS
T05134
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109109387 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109109387 (ercc6)
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109109387 (ercc6)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109109387 (ercc6)
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
109109387 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SesA
Motif
Other DBs
NCBI-GeneID:
109109387
NCBI-ProteinID:
XP_042625045
Ensembl:
ENSCCRG00000021478
UniProt:
A0A9R0B839
LinkDB
All DBs
Position
A13:17790623..17807442
Genome browser
AA seq
1397 aa
AA seq
DB search
MPVEGNKDQALAPLSSPVSALTPGVQEDNGLSIPGSSKEEPVATCPENVGSQIPRKSQAL
LQINRQEIQSVDHSSQAAELQGLGVDVYDQDVLEQGVLQQVDRAIQEANQAAAKAEAEKE
YESVLDDVRSCTTAMKHINKILEQLTPHAASSKDISRKIESVKRQKENKEKQLKKIRAKQ
KRLQAVLDGEDVQKLEAELLIEDDEEPGPSTLGSMLMPAQESEWEELIRTGHMTPFGSRI
PQKQEKKEPRKVMLSENSGFDKYLADQAMLADSRKRPILKKKITKKNSGQTTDGKEQKNK
SLSSKDKKLQKRMRKLQRTALKAHPKARPKVEKEQPRARRRKGDGEQTSDSEGSEYIPSD
ELMDPEEPERDDEDFWVDEDDEYQLKPYKKKNQAKTRKPKKEDESDEYIPSSSEDEDSQK
GKKVKKCNDDGDIEYYRQRIRKWKRQRLREKEVKREAGEDESEESDVEFDEGFKMPVFLW
RKLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKLKTRGSNYRYA
GLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTSKKEKLIPEIVASHGILITS
YSYIRIMQDYIQKYDWHYVILDEGHKIRNPNAGVTMSCKQFRTPHRFILSGSPMQNNLKE
LWSLFDFVFPGKLGTLPIFMEQFSVPITMGGYANASPVQVQTAYKCACVLRDTINPYLLR
RMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQNFLDSKEVYQILNGDMQVFSGLIALRK
ICNHPDLFTGGPRLLRGIPEEQLTEEEHFGYWKRSGKMIVVESLLLLWFKQGHRVLLFTQ
SRQMLEILEVFVREKGFSYLKMDGTTTIASRQPMITQFNQNKDIFVFILTTRVGGLGINL
TGANRVLIYDPDWNPSTDIQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFLT
NRVLKDPKQRRFFKSNDIYELFTLSNPDGSQGTETSAIFAGTGSDVQVPKRHKTSCPSQG
TSRPSSSSAFCVDDQDNTSLSGNRNATSVNGLSNNNAFGSQNNSLEPHSTADHLTNSTSK
DHSSGNSPQKQREKKKHCETPEKDTLPSDRHKRKHKKRKHSEDAKFEGCRISHLVKKRRY
KKEENEKEDEEKNEKKGDDYVLAKLFKKSGIHSVMKHDTIMEASNPDYVLVEAEANRVAK
DALRALKISRQNCRLSFSRGSTTATPPPVKRRFGHKKNSLLSQASGTMAKAAEKCKDADI
IKKSVVKKPGYAAHFSGEGAQEESGSLSSSSLLARMRARNHLNQPQRQEDEEEVERGSAA
VHATATEHDELLVDLRNFVAFQAQVDGQASTKEILEYFTPRLTSTQTPVFRELLRNICEF
HRLPGQEGMWKLKADYR
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaaggtaacaaggaccaggccctggctcctctgtccagccctgtcagtgcc
ctaactcctggagtccaagaagacaatggcctttccatcccaggaagcagtaaggaagag
ccagtggctacatgtccggagaatgttggttcacagattcccagaaaatcacaggccctg
ctccagatcaaccgtcaggagatccagtcagtggaccacagctctcaggctgctgaactg
cagggattgggagtggatgtgtacgaccaagatgttctcgagcaaggtgtgttgcagcag
gtggacagggccattcaggaggccaaccaggctgcggctaaagctgaggctgagaaagaa
tacgagtccgtactggacgatgtcaggtcatgtactactgctatgaaacacatcaacaaa
attttagagcagttaacccctcatgctgcctctagcaaggacatcagtcggaaaattgag
tctgtcaaacgacaaaaagagaacaaggagaagcagttaaaaaaaatcagagccaagcag
aagagattgcaggctgttcttgacggagaggatgtccaaaagcttgaggcagaattattg
attgaggacgacgaagaaccaggtccatccaccttgggcagcatgcttatgccagctcag
gagtccgaatgggaagagctcatccgcacaggtcacatgacccccttcggttcacggatc
cctcagaagcaagagaagaaagagcctcgaaaggtaatgctcagtgagaactccggattc
gacaagtaccttgctgaccaagccatgttagcagatagcaggaagagacccatattaaag
aaaaagatcactaagaagaactcaggacagaccacggatggcaaagagcaaaagaacaaa
tccctctccagcaaagataagaagctccaaaagcgaatgcgtaagctccagaggactgct
ctgaaggctcaccccaaagccaggcctaaggtggagaaggagcaaccccgagccaggagg
aggaaaggcgatggagagcagacgtccgacagcgagggctcagagtacatcccgagtgat
gagctgatggatcctgaggaaccagaaagagatgatgaggatttctgggtggatgaagac
gacgaataccaacttaaaccatacaagaagaagaaccaagccaaaaccaggaagcccaag
aaggaggatgagagcgatgagtacattcccagcagctcagaggatgaagactcgcagaaa
ggcaaaaaagtcaaaaaatgtaacgatgatggagatattgagtattacaggcaaaggatt
aggaagtggaaaaggcaaagacttcgtgaaaaagaagtgaagagagaagcaggagaggat
gagtccgaggaaagtgacgtggagtttgatgaaggatttaaaatgcctgttttcctctgg
aggaaactctttaagtatcagcagacaggtgtcaggtggatgtgggaactgcactgccag
caagcaggaggtattctgggagatgagatgggcctgggcaagaccatccagataattgct
ttcctggcaggccttagctacagcaagctaaaaacacgtggctccaattacaggtatgct
ggattggggcccacggtcattgtgtgtccggcaacagtcatgcatcagtgggtgaaggag
ttccacacttggtggcctccattccgtgttgctgtcctccatgacacgggctccttcacc
agcaaaaaggagaagctcatcccagaaatagtggcgagtcacggcatcctcatcacttcc
tactcatacatccgtattatgcaagattacatccagaagtacgactggcattacgtcatc
ctggatgagggtcacaaaattaggaaccccaacgctggggttactatgtcatgcaagcag
ttccggacaccccaccgttttattctctctggctcaccaatgcagaacaacctgaaagag
ctgtggtcgctttttgactttgtgtttccagggaagctggggactctgcccattttcatg
gagcagttctccgtgcccattaccatgggaggatacgctaatgcgtctccagtgcaggtc
cagacagcctataaatgtgcttgtgttcttcgtgacacgattaacccttacctgctgaga
agaatgaaggctgatgtgaaagcaaacctctctttacctgacaaaaatgaacaggtcctg
ttctgcagattaacagaagatcagcggcaggtttaccagaattttctggactccaaggag
gtttatcagattctgaatggagacatgcaggttttctcaggcctcatagctctgaggaag
atctgcaaccacccggatctgttcacaggcgggccacggttgctccgaggcatccctgag
gagcagctgactgaggaggagcacttcggttactggaaacgctctgggaagatgattgtg
gtggagtcactgctgctcctgtggttcaaacagggacaccgagttttgcttttcacccaa
tccaggcagatgctggagatcttggaggtgttcgtgagggagaaaggcttctcgtatctc
aaaatggacggcactactaccattgcatccagacagcctatgatcactcaattcaaccag
aacaaagacatcttcgtcttcattctgacaacaagagttggaggtttgggaattaatcta
actggagccaatagggttttaatctacgacccagactggaaccccagcacagatattcag
gctcgtgagcgtgcctggaggattgggcagaagcagcaggtgacggtttacaggctgctg
acagctggaacaattgaggagaagatttaccacagacaaatcttcaaacagtttctcacc
aaccgagtgctaaaagatcctaagcagaggcggtttttcaagtctaatgacatttatgaa
cttttcacgctgagcaatcctgacggctcccagggaacagaaaccagtgcaatatttgca
ggcacagggtcagatgtgcaggttccaaaaagacacaagacctcctgtccttctcaaggg
acctcaagaccatcatcttcatctgcattttgtgttgacgaccaagataacacttctctg
tcaggaaatagaaacgctacctcagtcaatggactctcaaacaacaatgcttttgggtcg
cagaacaatagccttgaacctcattccactgctgatcatttgacaaacagcactagtaaa
gatcattcttctggaaacagccctcaaaagcaaagagagaagaaaaagcactgtgaaaca
ccagaaaaggacacgttaccctcagacagacacaagcgcaagcataaaaagcgcaagcac
tctgaagacgctaagtttgagggctgtcgcatttctcacctggtgaagaaaagaaggtac
aagaaagaggaaaatgaaaaggaggacgaggaaaaaaatgagaaaaagggtgacgattat
gttctagccaaactctttaaaaaatcagggatccacagcgtcatgaagcacgacaccatc
atggaggcatcgaacccggactatgtgcttgtggaagctgaagcaaatagggttgcaaag
gatgcgctgagagctctgaagatctccagacaaaactgcaggctttctttctcaagaggg
tcaacaacagcaaccccacctccagtcaagagaaggtttgggcataagaaaaactcactt
ctgtctcaagcgtctgggacaatggcaaaagcagcagagaaatgcaaggatgcagatatt
ataaagaagtcagttgtaaagaagccaggatatgctgctcacttcagcggtgaaggagcg
caggaggagtctggttctctctcctcatcttctctccttgctagaatgagggccaggaat
catcttaatcaaccccagagacaagaggatgaggaagaggtagagagagggtctgctgct
gtgcatgctaccgctacagaacacgatgagcttctggttgacctgaggaactttgtggcc
ttccaagctcaggtggatggccaggcgagcaccaaggagatcctggagtactttaccccg
agactcacttccacacaaacaccagtgttcagagaactgctgaggaatatttgtgaattt
cacagacttcctggacaggaagggatgtggaagcttaaagctgactacaggtag
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integrated database retrieval system
