Cyprinus carpio (common carp): 109109631
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Entry
109109631 CDS
T05134
Symbol
syvn1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04120
Ubiquitin mediated proteolysis
ccar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109109631 (syvn1)
04120 Ubiquitin mediated proteolysis
109109631 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109109631 (syvn1)
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109109631 (syvn1)
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109109631 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-RING_Vps41
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
109109631
NCBI-ProteinID:
XP_042626279
UniProt:
A0A9Q9YTU1
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All DBs
Position
A14:25267046..25274271
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AA seq
620 aa
AA seq
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MVRAALVTGTSLVLTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVIYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMXITTITIKIKTF
LIFCRVQNVCLFFRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMV
TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAPAQAPAPAAAANA
PVPPPVNVAPGMMPQFPPGLFPFWGPLPGAPPPAAAPGAPAATDAPQTSAAATPAQGAES
GASSSTQPNADGASAAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSTMS
EAELRELEQEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLSPPRSETNAGETST
SANVESSSSTGNTETPSQENEAQSDGSVNGATGFSPPDSTTGVDKDRKEGDEDEDDSEPN
AAELRRRRLRKLETTNTPDH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctcttgtgaccggcaccagtttggtgctgactggtgcagtggttgct
catgcctacttcctcaagcaccagttctaccccactgtggtgtacctcactaaaagcagt
cctagcatggctgttatatacatccaggctttcgttttggttttccttttggggaaatta
atgcggaaggtctttttcgggcaactgagagctgctgaaatggagcacctgattgaacgc
tcctggtacgcggtgactgagacctgtttggcctttacagtcttcagggatgatttctct
cctcgcttcgtggcccttttcactttgctgcttttcctcaagtgcttccactggctggct
gaagacagggtggactttatggaaaggagtccaaatatctcatgggtcttccacttcaga
gttctctctctaatggtgttgctgggagtgttggactttctgtttgtcaatcatgcgtgc
cacagcattataacaagaggagcgtcagtgcagctggtttttggatttgagtatgcgatt
ctgatgactatggtcctcaccaccttcatcaagtacaccttgcatacgattgatctgcag
agtgagaatccatgggacaataaggccgtctacatgctctacactgagctctttactggt
ttcatcaaggtgcttttgtatatgtaaatcacaaccataaccataaaaataaaaaccttc
ttgatcttttgtcgtgtgcaaaatgtttgtcttttttttaggcaattcaagaaggcagta
acagacgccatcatgtctcgacgagccattcggaatatgaatactctctatccagatgcc
acccctgaagacttgcaagccactgataatgtgtgcatcatttgcagagaagagatggtg
actggagccaagaaactgccgtgcaaccacatctttcactcaagttgccttcgctcatgg
tttcaaagacagcagacgtgtccgacctgtcgtatggatgtcctccgagcgtcccagcca
aaccagactcctgccccagctcctgcacaagcacctgcccctgctgctgctgctaatgcc
cccgtacctccaccggtcaatgttgctccaggtatgatgcctcagtttcctccgggtctg
tttcccttctggggtcccttaccaggcgcgcctcctcctgctgctgctccaggtgcaccg
gcagctactgacgctccacagaccagcgccgctgcaacaccagcacagggagcagaatca
ggagccagcagctcgacccagccgaatgcagacggtgcctctgctgctcccggagcaatg
cctggattccccttctccatgcctccacctttcccatcagctccatggctgccgatgcct
ccacctccaccctttatgtcatccatgccaccgccaccgtcgactctgtccaccatgtca
gaggccgagctcagagaactggagcaggagggcaggagaggtttggaagccaggttgcag
tgccttcagaacatccacacattgctggatgctgccatgctcaacattcatcactacctc
agcacggtggctacgttaagtcctccaagatcagaaacgaatgctggtgagacgagtaca
tcagcgaatgtagagtcctcttcctccacgggcaacacagaaactcccagtcaggagaac
gaggctcagagcgatggatctgtaaatggagctacaggcttttctccaccagactcaacc
acaggtgtggacaaagacaggaaggagggtgatgaagacgaggatgacagtgagccaaat
gccgctgagttgagacgacgtcgtctgcgtaaactggagaccactaatactcctgaccac
tga
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