Cyprinus carpio (common carp): 109109927
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Entry
109109927 CDS
T05134
Name
(RefSeq) uncharacterized protein LOC109109927 isoform X1
KO
K05453
macrophage colony-stimulating factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109109927
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109109927
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccar04052
]
109109927
Cytokines and neuropeptides [BR:
ccar04052
]
Cytokines
CSF and other factors
109109927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
EC042_2821
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
109109927
NCBI-ProteinID:
XP_018978492
Ensembl:
ENSCCRG00000003377
UniProt:
A0A8C1JLH2
LinkDB
All DBs
Position
B11:complement(16247346..16258297)
Genome browser
AA seq
541 aa
AA seq
DB search
MNTHITAHKAKVRHLCFFLILGFHVVYAGVPGPCKHSVTQDHLLNLRRLMKNQLQNGCSI
TYTFTEQQNLSVVCYVKAAFPHILELLNTQFRYAKDSDNYRYTNSLKNLIYNIYSQRCIP
PINEEIEDSPKKFIRTHMTSPRAALEKAEEVIRMYMGLMIQSSKTVDWNCEEEYTEDYPE
STTEPLSQTAGASDCPCICPAMSIRSTKSSASTSHWNIYPKSTQSPQRSSFSFVETLKGV
NERTKQTKSAVPVTKHQTLDLRTPATWRSTQEHLSSSHFGSTPAFHEETSNSEMDHVPSP
DLFPSFTNVFLNRTDSSVETTTSGPYQKSTSDNTQDDVEKSTPLLLAKRSLDSKSQEGPS
SSYVKLSQNSVTTTSQPAYKDIKSTEIKNKPFQMLQPSKHIAPVTTTVLSSLKAAAHSSE
GLSALVEQPGHLHSPPENFQTHTQSPLRVPRNFMRTIHEAKLSKDSRSQEDRQEMKDQTH
PDRGAQRNPATEQSSSTIISFGTVLIITLGCGGLLLITVLFYRQQKLSDSQVIFALLRRP
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacataacagcccacaaagccaaggtaaggcatctgtgcttcttccttatc
ctgggctttcatgtggtgtatgctggtgtgccaggcccatgtaagcactctgtcacccag
gaccatcttttgaatttaagacgtctgatgaagaaccagttgcaaaatggttgctcaata
acctacacatttactgagcaacagaacctgagtgttgtgtgttatgttaaagcagcattc
cctcacatactggagctactcaacacccagttcagatatgctaaggactcggacaattac
cgttatactaattcactgaagaacttgatctacaacatttactcccagagatgcatccct
ccaatcaatgaggagattgaggatagcccaaagaagttcataagaacccacatgacttcg
cccagggcagctttggagaaagctgaggaagtgattcgcatgtatatgggtctgatgatt
cagagcagcaagactgtggactggaactgcgaggaggagtacacagaagattacccagaa
tccaccactgaacctctcagccaaacagcaggtgcctccgattgcccctgcatttgtcca
gcaatgagcattagatcaactaagtcatctgcatccacaagccattggaatatttacccc
aaatctactcaatccccacaaagatcatccttttcatttgtggaaactttgaagggtgtt
aatgaaagaactaaacaaaccaagtctgctgtcccagtaaccaaacaccaaacactagat
ctacgaacacctgccacatggagatcaacacaagaacatttatccagctcccactttggt
agcactccagcttttcatgaagaaacttcaaattcagaaatggaccatgtgccatcacca
gatcttttcccgtcatttactaatgtatttctaaacagaactgactcaagtgttgagact
accacctctggcccctatcaaaaaagcacaagcgataacacacaggacgatgtggagaag
agcacaccgcttttacttgccaagaggtctttagattccaaaagccaagaaggaccatcc
agttcctatgtaaaattatcacagaactcagttactacaacatctcaaccagcatacaaa
gatataaagagcacagagataaaaaacaagcctttccaaatgcttcaaccgagtaaacac
attgcaccagtcacaaccacagttctgtcttctttgaaagcagctgcgcattcatcagaa
ggcctgagcgcccttgttgaacagccaggtcatttacacagccctcctgaaaatttccaa
acacacacccaaagtccgttgagggtgccaaggaatttcatgagaaccatccatgaggcg
aagctcagcaaagacagcagatcccaggaggataggcaggagatgaaggaccaaactcat
ccagacagaggagcacagaggaatcctgccacagaacaatccagcagtacaatcatctct
tttggcactgtgctcattattacattggggtgtggtggacttctgctcataactgtcctg
ttttacagacaacaaaaattaagtgactcacaagtcatttttgctctgctgagaagaccc
acttag
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