Cyprinus carpio (common carp): 109109981
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Entry
109109981 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109109981
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
109109981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
Motif
Other DBs
NCBI-GeneID:
109109981
NCBI-ProteinID:
XP_018978570
LinkDB
All DBs
Position
36:5675987..6287340
Genome browser
AA seq
1595 aa
AA seq
DB search
MEDKSLRVADYFVVAGLTNSSKPLEEDVHPEDGGHRSSAQLKAPITDVAVVIRSLGEEVP
RGYTCIECTPSGLPAELNGGSLMGPQIFLCYRRGRDKPPLIDLGVLFEWKEKLKPDCQII
QTTPSGRPANISSSSSQRIYITYRRASENHSHTTLAVTDICVIVPGKGETPPHAFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNTLAFKAGLLSRYPEEDYDSFPLPESVPLFCLPMGASI
ECWPSHTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEEHLTDKQRSQLGLQANVLRP
DGSMTVHTNKSICLLSHWPFFDAFRNFLTFLYRYSISGPHTLPIEKKXCYISHFMHKVPX
PSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNAVTLLVLAVTEHKI
LVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLY
EPPTDISCVDLDTNTITHKEERRSLTWKILPRKACKHLINTLSNLHQQQDEGYQMSREEG
QMEAFMSEWEPGSGGKSLETLELEIQEAFLRFMAAILRGYRSYLLPITQAPSEKATDASS
LFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDSEKP
EDTRLIELDKSHRSEHTVYITPPELPALPEGEEAPMVYSYSGFPVLNTQLCELQDGPRIP
KATSAVRHISPISPAAIFRRSQQVGISNTQRMSKTYSSIPQMWSKCLLRHCHGLWFICLP
AYVSACHSKVRALHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMK
KAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVLRGVVLFKQVWRRQTTHPKD
THLSDASDLDNVSHGSLDSSNDSAERVSIDTDFTKMDSSDDRSSTGGQSDQGYDSLSKEE
VRLGGGEEQNSSPDMKEKKDRNSCPLSQTVLSEKEDSSLVVGIHPSAANGETSDVFSEAL
PKTKRPNSLGIFGEKPIRPSTLDLTPNKTVGELSNQSDTTLIETEAVGGVVSPPKVAVQR
TTSYTVAMEKRVAMEREHIGVERSVSCSSALGRVVKRTGIEAGFDPLSLMAAETQAHSEG
DNADTPTARRDLAEEIHHYMNNLSSPLSQRSLSMDLKGRQTPSPHSSPRMSPSTSQLQPQ
PRTRLFSSPSLPQGRVRRVREQRPTSLASPSSPTPSSSSFSMDSLLTPTLDVFKSSFFSA
GKGVAEKASRLYSRLSSQTSIAQDLNSDRVSVSSLGSGDPDCSSLVESDSCVAADGLSSP
QRDASQPVTRPKKSPYRSNHCLESPSAPPRLYQQSSLTVMKALQTPDACSDSSLSQSMQN
YAVEIRMSSCSRCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGSPFLPLLNVDIRNLGD
QERSPSQDAHTCQTDTTDELPQVYDSTDNGKKDHEPVTVPYLSPLVLWKELESLLENEGD
LAISSAAIVDHHPIVFWNLVWFFRRLDLPSSLPGLYLSSKHYCRDSQALQSCASEDSKNV
LVQILWDNPRLHQDHIKPCYLLWKSYCKNKIQIYI
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaagccttcgtgtagcagactattttgtggtggcaggactcaccaactca
tctaagcccctcgaggaagatgtccaccctgaggatggtggtcatcggagctcagcccag
ctcaaggcacccatcactgatgtggcggtggtgattcgctccctaggagaggaagtacct
cgagggtatacctgcattgaatgcaccccctctggacttcctgctgaactaaatggagga
agcctcatggggccgcagatcttcctctgctataggagaggaagagacaaaccgccgctc
atagaccttggtgtcctctttgagtggaaggagaaactgaagccagactgtcaaattata
cagaccacaccctctggtcgccctgctaatatcagtagctcctcctcccaaaggatctac
atcacatatcggcgtgcctctgagaatcactctcacaccacgctggccgtcacagacatc
tgtgtcattgttcccggcaagggtgagacaccaccacatgctttctgcaaggtggacaag
aatctcaacagcagtatgtgggggtcctctgtgtacttgtgctacaaaaaatctttggcc
aaaaccaacacgcttgcattcaaagcaggtcttttgtccagatacccagaggaagattat
gattcctttcctttgcctgaatccgtgcccctgttttgcctgccgatgggagcatccatt
gagtgctggccttctcataccaaatattctctacctgtcttttcaacattcgttctcaca
ggcgcctctggagagaaggtttatggtgccgccatccagttctatgagccctacccagaa
gaacatttgactgacaagcagcgatctcagctgggcctgcaggctaacgtgctcaggcct
gatggatcaatgactgtccacaccaacaaaagcatctgccttctctctcactggcccttt
tttgatgctttccgtaacttcttgaccttcctctacagatactccatctcaggtccacac
actctgcccatcgagaaaaagtaatgttatatttcccatttcatgcacaaggttcctntt
ccttcctcacaaaggccacgcatcctggtgcagctgtctccacatgatagtctgatgctg
agccagcctgtttcctctccactccctctgagtggcggaaggctctctacactgctgttg
aacctcggcccaaaaaatgcagtgactctgctggtgttggctgtgactgaacacaagatc
ctagtgcactccttacgtccagccgttcttaccagcgttaccgaggccctggtgtcgatg
atttttcccttccactggccgtgcccgtacattcctctctgcccgctggccctggcagat
gtgctcagtgctccatgccctttcattgtaggggtggactcgcggtactttgacctctat
gagccaccgacggacataagctgtgtggacctggacaccaacactataactcacaaagaa
gagcgcagatccctgacctggaagatcctgccaagaaaagcctgtaaacatctgatcaac
acccttagcaatctccaccagcaacaggatgagggttatcagatgagccgtgaggaagga
cagatggaggcctttatgagcgagtgggaacctggcagtggtgggaagagtctggaaacc
ttggagctggagatccaggaggcttttctgcgcttcatggcggccatcttgaggggctac
cgttcatacctgttgcccatcacacaggcaccatctgagaaagcaactgacgccagttca
ctcttcgatctgcaaggctttttgaagagtcgtgatcgatcccatcaaaagttttattcc
ctcatgaccaagacacagatgttcattcgtttcatcgaagagtgctcttttgtcagtgat
aaggatgcaagccttgctttctttgatgactgcgttgacaaggtggacagcgaaaagcca
gaagacacaaggcttattgaacttgacaaatcccaccgcagcgagcacacggtctacatc
acacctccggagctgccagcgcttccagaaggagaagaggcacctatggtttatagctac
agtgggttcccagtactgaacacccaactctgtgagcttcaggatggtcccagaatcccc
aaagcaacatcagccgtgagacacatcagtcccatcagcccagctgccattttcaggcgc
tcccaacaggttggtatttcaaacacccagaggatgtctaagacatactcctcaatccca
cagatgtggtccaagtgtctgctcaggcattgtcacggcctgtggttcatctgcctgcct
gcgtatgtcagcgcctgccactctaaagtgcgggcactgcatactgcttacgacgtgctg
cgaaacatgcaggacaaaaagttgcagcctcctgatgaggtgtgttaccgggtcctgatg
cagctgtgtgggcagtatggacagcctgttcttgccgtccgggttctttttgaaatgaag
aaagccggggtgcagccaaatgccattacctatgggtactacaacagggctgttctggag
agcacatggccttcctccaccagagggggatacttcctgtggggaaagctgagaaatgtg
cttcggggtgtggtgctgttcaaacaagtatggaggaggcagaccacccacccgaaagac
acccatctttcagatgccagtgatctcgacaatgtgagccatggcagtctggacagctct
aacgattcagcggagcgagtttccattgatacagacttcactaaaatggattccagtgat
gacagatccagcacaggtggtcagtctgatcagggctatgattctctgtctaaagaggag
gtgaggttaggaggaggtgaagagcagaactcctctccagacatgaaggagaagaaggac
agaaactcttgcccattatcccagactgtactctcagagaaagaggattcatctcttgtg
gttggaatccatccatctgcagccaatggggaaaccagtgatgtcttctctgaagccctt
ccaaagacaaaaaggccaaactccctgggtattttcggagaaaagcccataaggccaagc
acactggatctaaccccgaataagacagtaggagaactcagcaatcaatctgatacaaca
ttgatagaaacggaagcagtggggggcgttgtgagcccacctaaagttgccgtgcagagg
actactagctacacggttgccatggagaagagagttgccatggagagggagcatattggc
gtggagaggagcgtgagctgcagcagtgctcttgggcgagtggttaagaggacaggtatc
gaagcaggttttgaccccctgtccctcatggcagctgagactcaagcccacagtgagggc
gataatgcagacaccccaaccgcccgccgagacctggctgaagagattcatcactacatg
aacaacctgagcagcccgttaagccagcggtctctcagtatggaccttaaggggcgtcag
accccatcccctcacagctctccccgcatgtctcccagcacctcccaactccaacctcag
ccacgaacaagactcttctcatcgccctccctccctcagggccgcgtgcgcagggtcagg
gagcagcggcccacctccctggcctcaccttcctcacctactccctcctcttcttctttc
tccatggactccttgctcaccccgaccctggatgtgttcaagagcagctttttctctgct
gggaagggcgtcgctgagaaagccagccgactgtattcgcgactttcctctcagacgtcc
attgcacaggacttaaactctgaccgggtcagtgtgtcctctctagggtcaggtgaccct
gattgctcctctctggttgagagtgattcctgtgtagccgcggacgggctctcttcccca
caacgggacgcctctcagcctgtcacacgtcccaaaaagagcccttacaggagcaaccac
tgcctagaaagcccatctgcaccacctcgactttatcagcagtcctctctaactgtaatg
aaagctctgcagaccccagacgcgtgttctgattccagcctttctcaatccatgcagaac
tacgctgttgaaatacgtatgtccagttgttcgcgctgtaacacctgtgagagtttggtg
tatgatgaagagatcatggctggttggacagctgacgattctaacctcaatagcacgtgc
cccttttgtggctctccgtttctgcctctgctcaacgtggacatcagaaacctgggtgac
caggaaagatctccctctcaagatgcacatacttgccagacagacaccacagatgaacta
ccacaagtttatgattccactgacaatggcaaaaaagaccatgagccagttaccgtgccc
tacctgagtcctctggtactttggaaggaactggaaagcttgctggagaacgagggggac
ctggccatctcttctgcagccattgtggatcaccaccctattgtgttctggaatctggtg
tggttcttccgtaggctggacctgcccagcagcctgccgggactctatctgagctccaaa
cactactgcagagattctcaggctctgcaaagttgtgcatcagaggacagtaaaaatgtc
ttggtccagatcctgtgggacaatcccagactgcatcaggaccacatcaagccttgctac
ttgctctggaaatcatattgtaagaataagatacaaatatatatataa
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