Cyprinus carpio (common carp): 109110377
Help
Entry
109110377 CDS
T05134
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109110377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109110377
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
109110377
REST complex
109110377
Heterochromatin formation proteins
Other heterochromatin formation proteins
109110377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
DUF6706
Motif
Other DBs
NCBI-GeneID:
109110377
NCBI-ProteinID:
XP_042609226
Ensembl:
ENSCCRG00000037025
UniProt:
A0A9Q9XWD1
LinkDB
All DBs
Position
B25:complement(6338926..6355664)
Genome browser
AA seq
1269 aa
AA seq
DB search
MRRRLEDQEPVFTPQQRRLPGSAEGFQHRVLAPAPAVFEAVADAMQPTPGIQYPVPQAYQ
VSTVAQSSSGHGHTPSPAAAHSGAHHHGPAAVQAHGPAPVQGHSHPPTPSASAQGQQQFQ
RLKVEDALSYLDQVKLQFGNQPHVYNDFLDIMKEFKSQCIDTPGVISRVSQLFKGHPDLI
MGFNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPTRPPPPPPPPQLQNQIP
ANPPSLASTPPAQPTPKSKQLQSPVLTPSSHPNPSIPPYASPRSPPLQPHTPINNMPTAP
PLQNNQPVEFNHAISYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPALT
EQEVYAEVAQLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGGTAKKPQLN
NKQRPNQNSCQIRKHSTTAVTPPVKKKLKLAESGKHGGTESLFFDKVRKALRSAEAYDNF
LRCLIIFNEEIISRAELVQLVVPFLGKFPELFTWFKNFLGYKEMSHLERYPKERATEGIA
MEIDYASCKRLGSSYRALPKSYQLPKCTGRTSLCKEVLNDTWVSFPSWSEDSTFVSSKKT
QYEEHMYRCEDERFELDVVLETNLATIRVLEAVQKKLSRMSAEEQAKFRLDNTLGGCSEI
IHRKAIQRIYGDKALDIIDGLKKNPAVSVPIVLKRLKLKEEEWREAQRGFNKIWREQNEK
YYLKSLDHQGINFKQNDTKVLRSKTLLNEIESIFDERQEQASEDNSASPSGPQLTLTYED
RQILEDAAALIIHHVKRQSSINKEDKYKIKQIIYHFIPDMLFSQRGVLVAAEEDDDEEDM
DLEEGASKKHNGLTGGVSGSPTKSKLLFSTSAAQRLRSCEDAYNLFYVNNNWYIFLRLHH
TLCSRLLRLYAQAERQIEEDLREREWEREVLGLKRDKNDNTAIQLRLKEPMDIDVEDYYS
VFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQNIVRQLQHMVSEEICVQV
TELYLSESSHSATGGSLLTQSSRAPAEVSYQRKAEQLMSDENCFKLMFMKNRGNVQLTVE
LLDTEEENSEGPMEIERWSDYVARYLSADFISPDLRDHLSQKPVFLPRNLRRIRKCQRDG
ESQEKEVKDCGRKENADSMKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAQQSHERVST
RLHQRFHAWTQRWVKEHVTRDMAAETSKWLMGERREGLVPCSTTCDPETLHYQRINKYRV
QYGSAHKSP
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggcgtttagaggatcaggagccagtgttcaccccacaacagcgcaggcttcct
ggcagcgccgagggcttccagcacagggttcttgccccagcgcctgccgtattcgaggct
gtggctgatgccatgcagcctactcccgggatacagtacccggttccccaggcataccag
gtgtccacagtggcccaaagctcaagtggtcacggtcacacacccagtccagcggcggcc
cacagtggtgctcaccatcatggtccggcagcggtccaggcccacggtcctgcgccggtg
cagggccacagtcacccgcccaccccctccgcatctgcacaggggcagcagcagttccag
agactcaaggtggaggatgccctgtcttacctggaccaggtgaagctacagtttggcaat
caaccacacgtctacaatgatttcttggatatcatgaaagagtttaaatctcagtgcatt
gacacaccgggcgtaatcagcagggtgtcgcagctctttaagggtcaccctgatctcatt
atggggtttaacacgtttcttccgccgggatacaagattgaagttcagaccaatgacctg
gttaatgtgactacacctggtcagatccaccacatcacacctcacggcatctccgtgcag
aacatccccaccagaccaccgccgccgccgcctccgccacagctccagaaccagatcccc
gcaaaccctcccagcctggcatccacacctcccgcccaacccacacccaaaagcaagcaa
ctgcagtctccagttctgactccgagcagtcatcccaatccgtccatccctccgtatgcg
tccccgcgttcgcccccactgcagccccacacccccatcaacaacatgcccaccgcccca
ccgctgcagaacaaccagcccgtggagttcaaccacgccatcagctacgtcaacaagatt
aagaaccgcttccagggccagcctaacatctacaaatccttcctcgagatcctgcacaag
taccagaaggagcagcgtaatgctaaagaagcgggcgggagttacaccccagccctgacc
gagcaggaagtttacgctgaggtggcccaactctttaaaaaccaggaagatctgctctct
gagttcggacagttcctgccggacgccaacagctctgtgctgctgagcaagacgacagca
gagaaggccgaatctgtgcgtaacgatcacggtggaacggccaagaaaccacagctcaat
aacaagcagaggcccaatcagaacagctgccagatacgcaagcactcgactacagctgtc
accccacctgtgaagaaaaagctcaagttggcagaatctggcaaacatggaggaacagag
tctcttttctttgacaaagtgcggaaagctttgcgaagtgcggaagcatacgacaacttt
ctgcggtgcctgatcatttttaatgaagagatcatttctcgtgctgagctggttcaactt
gtggttccattcctgggcaaatttcctgagctgttcacttggtttaagaacttccttgga
tataaggagatgtcacacctggagaggtacccaaaagaaagagccactgaaggaattgct
atggaaattgactacgcttcatgcaagcgtctgggctctagttaccgagctttacccaag
agctaccagcttcccaaatgcacaggaagaacatcactctgtaaagaggtgctgaatgat
acctgggtttccttcccctcctggtctgaggactcgaccttcgtcagctccaagaagact
cagtatgaagagcacatgtacaggtgtgaggacgagcgattcgagctggatgtcgtcttg
gaaaccaacctggccaccattcgtgtgctggaggcggttcagaagaagctgtctcggatg
tctgcggaagagcaggcgaaattcagactggacaacactctgggcggctgctcggagatc
atccacaggaaagccatccagaggatatatggagacaaagctctggacatcatcgacgga
ctgaagaagaatccggcagtgtctgttcccatcgtactcaagaggctaaagctgaaggag
gaagagtggcgtgaagctcaaaggggttttaacaagatctggagagagcagaatgagaaa
tactatctaaaatctctggaccatcaaggcattaacttcaaacagaacgacaccaaggtg
ctgcgctcgaaaacgcttctcaacgagatcgagagcatctttgatgagcggcaggaacag
gcttcggaggacaacagtgcatctccaagcgggcctcaactgacgctgacctacgaggac
cgtcagattctggaggacgcggcggcgctaatcatccatcacgtgaaacgccagagcagc
atcaacaaggaggacaaatacaagattaaacagatcatctaccacttcatccccgacatg
ctgttctcccagagaggagtgttggtggccgctgaggaagacgatgatgaggaagacatg
gacctcgaggagggcgcgtcaaagaagcacaacgggctaacaggaggtgttagcggcagc
ccgacaaagtccaaactgctgtttagcacatctgcggctcagcggctgcgctcctgcgag
gacgcgtataatctgttttacgtgaataacaactggtacatcttcctccggctgcaccac
accctgtgctcgcgtctgctgcggctctatgctcaggccgagcgacagatcgaagaggac
ctgagggagcgcgagtgggagagggaggtgctcggactcaaacgggacaaaaacgacaac
actgccatccagctgcgcctgaaggagcccatggacatagatgtggaggattattactcg
gtgtttctggagatggtgcgtaatctgctggatgggaatatggaggcgtctcagtacgag
gattcgctccgagagatgttcaccattcacgcctacatcgccttcactatggacaagctc
atccagaacatagtcagacagctccagcacatggtgagtgaggagatctgtgttcaggtc
acagaactgtacctgagtgagagcagccactcagccacaggtggatctctgctcacacag
agcagcagggcgccggcggaagtgtcttatcagcgcaaagccgagcagctcatgtccgac
gagaactgctttaagttgatgtttatgaagaaccgagggaacgttcagctcactgtggag
ctgctggacacggaggaggagaactcagaagggcccatggagatcgagcgctggtcggat
tacgttgcgcggtatctttcggcagatttcatatctccagacctgagggatcatctgtct
caaaagcctgtgtttctgccaaggaacctgcggcggatccgtaagtgtcagcgcgacggt
gagtctcaggaaaaggaagtgaaggactgcggcagaaaagagaacgcagacagcatgaag
atggagtgcatgttcaaactcaactcctataagatggtgtacgtcttcaaatctgaagac
tacatgtacagacgcacggcgctgctgagagcccagcagtctcacgagcgagtgagcaca
cgtctgcaccagcgctttcacgcctggactcagcgctgggtgaaggagcatgtgaccaga
gacatggctgctgaaaccagcaagtggctcatgggagaaaggcgggagggactggtgccc
tgctccaccacctgtgaccccgagacccttcactatcagcgcattaataagtacagggtc
caatacggcagcgcccacaagagcccgtga
DBGET
integrated database retrieval system
