Cyprinus carpio (common carp): 109110474
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Entry
109110474 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04150
mTOR signaling pathway
ccar04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109110474
04150 mTOR signaling pathway
109110474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109110474
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109110474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
109110474
NCBI-ProteinID:
XP_042577452
UniProt:
A0A9Q9W5Z3
LinkDB
All DBs
Position
B4:complement(1040546..1083971)
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AA seq
1625 aa
AA seq
DB search
MGAVLQSLLLCTLCLQIRGLPLLLYANRRDLRLVDAARGRGNATVVVSGLEDAAAVDYVY
EQGLIYWSDVSEEAIKRTLFXPSAPGGVQNTVVSGLASPDGLACDWMGNKLYWTDSETNR
IEVSELDGTHRKVLFWQDLDQPRAIALDPARGYMYWTDWGEIPKIERAGMDGTHRSVIID
SEIYWPNGLTLDYDLQKLYWADAKFSFIHRSDLDGSRREVVVKGSLPHPFALTLYEDTLF
WTDWNTHSIHACLKHTENSHEIHTNIFSPMDIHVYSQERQPLEVTIPCALKNGGCSHLCL
LSPVKPYYQCACPTGVQLLDDNKTCRDGGAKLLLLVAGRRDVGGISVDAXVFSEILLQTD
DIRHAIAIDYDPVEGHIYWTDDEVQAIRRSSLDGSEAQFVVTSQVNHPDGIAVDWIARNL
YWTDTGTDRIEVTRLNGSMRKILISEELDEPRAIALDPVAGVCRCFMXLNVWGELPKIER
AALDGTERLVLVNTSLGWPNGLALDYSERKIYWGDAKTDVIEVMEMDGSGRRVLVDDNLP
HIFGFTLLGDYIYWTDWQRRSIERVHKHSLEREVIVDQLPDLMGIKATYVHQTFGVNPCA
HANGGCSHLCLYKPQGVSCACPIGLELMADLSTCIIPRGLPAVLLLLFSRHTDIRRISLE
TNNNNVAIPLTGVKEASALDFDITDNRIYWTDITLKTISRAFMKHGALEHVVEFGLDYPE
GMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG
GRPKIDRSAMDGSGRITLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMMGLEREVI
ADDLPHPFGLTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQS
GWNACASTNGHCSHLCLAVPVSSFVCGCPAHYSLNYDNKTCSAPTSFLLFSQKTAINRMV
IDELQSPDIMLPIHSLRNVRAAIDYDPLDRQLYWIDSKQSAIRRAQQDGNQSVTVVSGAS
LGLQPYDLSIDVYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYM
YFTNLQERSPKIERAALDGTEREVLFFSNLGKPAALAVDSELGKLFWVDMDLRRIESSDL
SGANRIVIEDSNILQPVGLTVFGNFLYWIDRQQQMIERIDKVTREGRTKIQARIASLSDI
HAVRELHMDEYNKHPCTSDNGGCSHICIVKGDGSTRCSCPVHLVLLQDELSCGEPPTCSP
EQFSCVSGEVDCIPQAWRCDGFAECDDSSDERDCPVCSDQEFQCDSKQCVDMTLRCNGEI
NCQDRSDENKCEVLCPMDQFTCANGQCIGRHKKCDHNTDCTDNSDEIGCYATEEPSFPPT
NTIGSIVGVVMVLFVVGAVYFVCQRVLCPQMKDDAETMTNDFVVHGPAPVPLGYVPHPSS
LTGSLPGMSRGKSVIGSLSIMGGSSGPPYDRTHVTGASSSSSSSSKGTYFPPILNPPPSP
ATVRSQYTMEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSVDYTPGRRAPHA
SSAAVKGYTSDLNYDSEPLPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSP
CTDSS
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgtgctacagagtctcttactgtgtactttgtgtttgcagatacgcggcctg
ccgctcctcttgtatgcgaaccggagggacctgcggctggtggacgcggctcgcggtcga
gggaacgccacggtggtggtcagcggtttggaggacgcggcggcggtggattatgtttac
gagcagggactgatttactggagcgacgtgagcgaggaggccatcaaacgcacgctgttt
taaccgtcagcgcccggcggggtccagaacacggtcgtgtccggtctggcctctccggac
ggcctggcctgcgactggatggggaataagctctactggaccgactcggagaccaatcgg
atagaagtgtccgagctggacgggacgcacaggaaggtgttgttctggcaggatctggac
cagccgagagccatcgctctggacccggcccgagggtacatgtattggacggactggggt
gagatcccgaagatcgagcgcgctgggatggacgggacgcatcgctcggtcatcatcgac
tcggagatctactggcccaacggcctgacgctcgactacgacctgcagaaactctactgg
gccgacgccaagttcagcttcatccaccgctcagacctggacggctcgcgcagggaggtg
gtggtgaagggctcgctgccgcacccgttcgcgctgacgctgtacgaggacacactcttc
tggacggactggaacacacactccatccacgcctgcctcaaacacacagaaaacagccac
gagatccacaccaacatcttctcacccatggacatacacgtctacagccaggagcggcag
ccgctggaggtgacgattccctgtgcgctgaagaacggaggatgttctcatctgtgtctg
ctgtctccggtcaaaccttattaccagtgcgcctgtccaaccggcgtccagctgctggac
gacaacaagacctgcagagacggtggtgcgaagctgctgcttcttgtggcggggcgcaga
gatgtggggggtatctctgtggacgcgnntgtgttttcagagatattgttgcagaccgac
gacatccggcacgccatcgccatcgactacgacccggtggagggacacatctactggacg
gacgacgaggtgcaggccatccgcaggtcgtctctggacggcagcgaggctcagttcgtg
gtgacctcgcaggtgaaccatccggacgggatcgccgtggactggatcgcacggaacctg
tactggaccgacaccggcacggaccggatcgaggtgacgcggctgaacggaagcatgagg
aagatcctgatctcggaggagctggacgagccgagggccatcgcgctggaccccgtcgcc
ggtgtgtgtcggtgtttcatgtagttgaatgtctggggtgagctgccgaagatcgagcgg
gcggctctggacgggacggagcggctggtgctggtcaacacgtctctgggctggcccaac
ggactggcgctggactacagcgagaggaagatctactggggagacgccaagaccgacgtc
atcgaggtgatggagatggacggatcgggacggagggtgttggtggacgataacctgccg
cacatcttcggtttcacgctgctgggggactacatctactggacggactggcagcggcgc
agcatcgagcgcgtgcacaaacacagcctggagcgcgaggtcatcgtggaccagctgcct
gacctcatgggcatcaaggccacatacgtccaccagaccttcggtgtgaacccgtgtgcg
cacgctaacggcggctgcagtcacctgtgtctgtataagccgcagggcgtgtcgtgtgcg
tgtcccatcggtctggagctcatggccgatctgagcacctgcatcatcccccgaggcctt
cctgctgttctcctcctgctgttctcccgccacacagacatcaggcgcatctcgctggag
accaacaacaacaacgtggccattcctctcaccggcgtcaaggaggcgtccgcactcgac
ttcgacatcaccgacaaccgcatctactggacagatataaccctgaagaccatcagtcgt
gcgttcatgaaacacggcgctctggagcacgtggtggagttcggtctggactatcccgag
ggaatggctgtggactggctgggcaagaacctgtactgggccgacacggggaccaaccgc
atcgaggtggccaaactggacgggcagcacagacaggtgctggtgtggaaggatctggac
agccctcgagcgctggcactggacccggccgagggcttcatgtactggacggagtggggg
gggcggccgaagatcgaccgctcggccatggacggttctggacgcatcactctggtgccg
aacgtgggccgtgcgaacggactgaccatcgactacgccgagcggcggctgtactggacg
gacctggacaccacgctgatcgagtcctccaacatgatgggtctggagcgtgaggtgatc
gctgacgatctgccgcatccgttcggactcacgcagtaccaggactacatctactggacc
gactggagccagcgcagcatcgaacgggccaacaagaccagcgggcagaaccgcaccgtc
atacagggacacctggactacgtcatggacatcctggtgttccactcgtccagacagagc
ggctggaacgcctgcgcctccaccaacggtcactgctcacacctgtgtctggctgttccg
gtcagcagcttcgtgtgcggctgccctgcgcattactcactcaactacgacaacaagacc
tgcagcgcgcccacatccttcctgctgttcagtcagaagacggccatcaaccgtatggtc
atcgacgagctgcagagccccgacatcatgctgcccatccacagcctcagaaacgtgcgc
gccgccatcgactacgacccgctcgaccgccagctgtactggatcgactccaagcagagc
gccatccgccgcgcgcagcaggacgggaaccagagcgtgacggtggtgtccggcgcgagc
ctcggcctgcagccctacgacctcagcatcgacgtctacagccgcttcatctactggacc
agcgaagtgaccaacgtcatcaacgtcacgcgcaccgacggctcacgggtcggagtggtg
ctgcgcggggaacacgacaaaccgcgcgccatcgtggtcaatcctgagcgagggtacatg
tacttcactaatctgcaggagcgctctccgaagatcgagcgtgccgctctggacgggacg
gagcgcgaggtgctgttcttcagtaatctggggaagccggccgctctggccgtcgacagc
gagctgggaaaactcttctgggtcgacatggacctgaggcgcatcgagagcagcgacctg
tccggagccaatcgcatcgtgatcgaggactccaacatcctgcagccggtgggtctgacg
gtgttcgggaacttcctgtactggatcgaccggcagcagcagatgatcgagcgcatcgat
aaggtcacgcgcgagggacgcaccaagatccaggcgcgcatcgcctctctgagcgacatc
cacgccgtccgcgagctccacatggacgagtacaataaacacccctgcacctctgataac
ggcggctgctcacacatctgcatcgtgaagggagacggatccacacgctgctcgtgtccc
gttcacctggtgctgctgcaggacgagctctcctgcggagagccgcccacgtgttctccg
gagcagttctcctgtgtgtccggcgaggtggactgcatccctcaggcctggcgctgcgat
ggcttcgctgagtgtgacgacagcagtgacgagcgagactgtcccgtctgctccgaccag
gagttccagtgcgacagcaagcagtgtgtggacatgactctgcgctgcaacggagagatc
aactgccaggaccgctccgatgagaacaaatgtgaagttctctgtcccatggatcagttc
acctgcgccaacggccagtgcatcgggcggcacaagaaatgtgaccacaacacggactgc
acagacaactcggacgagatcggctgctacgccactgaagagccgtcctttcctcccacg
aacaccatcggctctatcgtgggtgtggtgatggtgctgttcgtggtgggcgccgtgtat
ttcgtgtgccagcgtgtcctgtgtcctcagatgaaggacgacgccgagaccatgaccaat
gacttcgtggtgcacgggccggcgccggtgccgctgggatacgtgcctcaccccagctct
ctgaccggctcgctgccaggcatgtctcgcgggaaatcggtcatcggctcgctgagcatc
atgggaggcagcagcggtcctccgtatgaccgcacacatgtgaccggagcctcgtccagc
agctcctccagcagcaagggcacatacttccctccgatcctgaacccccccccgtctccc
gccacagtgaggtcacagtacacgatggagttcggttactcctcgaacagcccgtcgacg
caccgatcatacagctacaggccgtacagttaccgtcacttcgcccctccgacgacgccc
tgcagcacagacgtgtgcgacagcgtcgactacacgccgggccgaagagctccgcacgcg
tccagcgccgcggtcaagggctacaccagcgacctgaactacgactcggagccgctgccg
ccgccgcccacccctcggagccagtacctgtctgcagaggagaactgtgagagctgccca
ccgtcaccctacaccgagcgcagctactcacaccacctgtacccgccgccaccctcgccc
tgcacagactcctcctga
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