Cyprinus carpio (common carp): 109110487
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Entry
109110487 CDS
T05134
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar02010
ABC transporters
ccar04145
Phagocytosis
ccar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109110487 (cftr)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109110487 (cftr)
09144 Cellular community - eukaryotes
04530 Tight junction
109110487 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccar02000
]
109110487 (cftr)
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
109110487 (cftr)
Transporters [BR:
ccar02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
109110487 (cftr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
AAA_21
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
MMR_HSR1
DUF87
AAA_23
Dynamin_N
DUF5805
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
109110487
NCBI-ProteinID:
XP_042631204
Ensembl:
ENSCCRG00000048940
LinkDB
All DBs
Position
A18
Genome browser
AA seq
1485 aa
AA seq
DB search
MQRSPVEDASCLSKYFFWWTNPIMRKGFREKLRPSDVYQAPSQDAADILADRLEKEWDRE
VASGRKKPSLLRALARCFIRPFLLFGFLLYIGEATKTVQPQLLGRIIASFDPVHEPERAN
GYFLAFGLGLLFTARFLLLQPAMFGLHRLGMKIRIALFSIIYKKTLKLSSRVLDKISTGQ
LVSLMSANLGKFDQSLGMAHFVWISPLQCILCTGLIWELIDVNSFCALAAISLLGVLQAF
LSHKMGPYKAQKVVLTNKRLALTSEIMENLHSVKAYGWEEIMETLIKNIRQDEVRLTRKI
GSLRYFYSSAYFFSAIFVIVAAIVPHALSRGINLRRIFTTLSYCMVLRMTVTRQLPGSIQ
MWYDTMRLIWKIEEFLSKEEYKLMEYDLSITELELKDVTASWDEGPGELLERIKQENKAN
GHHNGDAGLFFTNLYVTPVLKDISLNLKKGEMLAVNGSMGSGKSSLLMTILGELFLYSVE
IRHSGRISYSSQTAWIMPGTIRDNILFGLTYDEYRYKSVVKACQLEEDLAALPEKDKTPM
AEGGLNLSGGQKARVALARAIYRDADVYLLDAPFTHLDIATEKEIFDKCLCKLMASKTRI
LVTNKIEHLKRADKILLLHNGESFFYGTFSELQSERPDFSSLLLGLEAYDNVSAERRCSI
LTETLHRVSVDESAGMRPERSAYRQVAPSMPVYIDERKSSVIVNTLGAARKASFIQIPEE
EVRRTLPARKFSLVPENELVDESFMGSDVYHNHGVHMAGQRRQSVLAFMTNAQGQGRRDH
LQSSFRRRLSVVPQSELASELDIYARRLSDSTYDITGVLEEENIEACLVNEIDEKEDVFE
TTKWNTYVRYVSNNKSLLYVLIFIFLIAAIEVAGSVAGIFLITDDFCFGEHQRVEPNMTK
YSNMSSPGKKNAIIVTPTGSYYILYIYVATSESLLAMGFFRGLPFVHTMITISKKLHQKM
LHAVLSAPMSVLNTMKTGRIMNRFTKDMATIDDMLPLLMFDFVQLTVVVVGCILVVSIVR
PYIFLAATPLAIIFIVMRKYFLRTGQQLKQLETEARSPIFSHLIISLKGLWTIRAFERQA
YFENLFHKTLNTHTATWFLYLSTLRWFLFRADIIFVFFFTLTAWIAVGTNQDKPGEIGIV
ICLAMLILGTFQWCVATSIAVDGMMRSVDRVFKFIDLPSETPKPDKSKCSDLIIENADAQ
ADSSWPNRGHIDVQNLTVKYTEGGHAVLKNLSFTVEGRQRVGILGRTGSGKSSLFNALLR
LVYTDGDISIDGVNWNKMPLQKWRKAFGVMPQKVFIFTGPFRLNLDPYGCHSDEELWRVT
EEVGLKTVIEQFPDKLDFQLEYGGYVLSNGHKQLICLARSILSGARILLLDEPSAHLDPI
TIKVLKKTLRQSFSTCTILLSEHRVEPLLECQSFLMMDKGQVKTYDSIQKLLNETSHLKQ
AISPAERLKLFPRRNSSMRGPQSKLSSVTQTLQEEAEDNIQDTRL
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcacctgtggaggatgccagctgcctctcaaaatactttttctggtggaca
aaccctataatgagaaagggttttagggagaaactgaggccgtctgatgtttatcaagct
cccagtcaagatgcagcagacattcttgcagatcgtctggagaaagaatgggacagagaa
gttgcatctggaagaaaaaagcccagtctactacgagcactggcacgatgctttatacga
ccatttctgttatttggcttcctcctatatataggcgaggctacaaaaacagtgcagcca
cagcttttagggcggataattgcatcatttgacccggtccatgaaccggagcgagcaaat
ggttactttcttgcctttggtctcggcttgctattcactgcccgctttctcctgctccag
cctgccatgtttgggctgcaccgcctgggcatgaagatcagaattgcactctttagcata
atctataaaaagaccttgaaactttctagccgagttttggacaagataagcacaggccaa
ctggtcagtctgatgtcagccaacctgggcaaatttgatcagagcctgggcatggcccat
tttgtatggatatcaccattgcaatgcatcctgtgtacagggcttatctgggaactcatt
gatgtcaatagcttctgtgcacttgccgctatctctttgctgggtgtcttgcaggccttt
ctctcacataaaatgggtccttacaaagcacaaaaggtggtactgactaacaaacggttg
gctctgacctcagagatcatggaaaacctgcattcagtgaaggcctatggctgggaggag
ataatggagaccctcatcaaaaacatcagacaggatgaggtgaggctgaccaggaagatt
ggctccctgcgctatttttacagctctgcatactttttctcagccatctttgtgattgtg
gccgcaatcgtccctcatgccctcagccgtggtatcaacctgcgtcgcatattcacaact
ctctcctactgtatggtgctgcgtatgactgtcactcgacaactgcccggctccatccag
atgtggtacgacaccatgcggcttatttggaagattgaagaatttcttagtaaggaggaa
tacaagttaatggaatatgatctcagcatcacagagctggaacttaaagatgtgactgct
tcttgggatgagggtcctggtgaacttttggaaaggataaaacaggagaacaaagctaat
ggccatcacaatggagatgcaggcctcttctttaccaacctatatgtgactcccgtattg
aaggacatcagtttgaacctgaagaaaggagagatgttggctgttaacggttctatgggc
tctgggaagagctcattgttgatgaccattcttggggagctgtttttatattctgtggag
atccgacacagtggtcgaatctcctactcctcccaaacagcctggatcatgcctggcacc
atccgagacaacattctttttggtctgacctatgatgagtatcgctacaagagtgtggtc
aaagcatgccagctcgaggaggatctggctgctcttcctgagaaggataagacacctatg
gctgaggggggtttaaacttgagtgggggtcagaaggcacgtgtggctctagccagggct
atttacagagatgctgatgtttacctacttgacgcaccatttactcacctggatattgca
acagaaaaggaaatatttgacaaatgtctgtgtaagctgatggcctctaagacacgcatc
ttggtaacaaataagattgagcatttaaagcgggctgataagatccttctgctccacaac
ggtgaaagttttttctacggcaccttttcagagcttcagtcagaacggcctgatttcagc
tctttgcttttgggtttggaggcctatgacaatgtcagtgcagagcgccgctgctccatc
ctcacagagactctccaccgcgtctcagtggatgagagcgcaggcatgcgacctgaacgc
tcagcttatcgccaggtggccccgtcaatgcctgtgtacatagatgaaagaaaatcttca
gttatcgtcaacactctcggagcagctcgtaaggcatccttcattcagatacccgaggag
gaggttcggaggacattacctgcccggaagttctccctggtaccagagaacgagctcgtg
gatgagtcctttatggggagcgacgtgtatcataaccacggagtgcatatggctggtcag
aggaggcagtctgtgttagctttcatgaccaatgcacaaggccaaggccgtcgtgaccac
cttcagtcatctttccgcagacggctgtccgtcgtgcctcagagcgaactggcatctgag
ctggacatctatgctcgccgtctgtcagacagcacgtatgacatcaccggggtcctagaa
gaagagaacattgaggcttgcttagttaatgaaatagatgaaaaagaggatgtattcgaa
acaacaaagtggaacacatacgtcagatatgtgtcaaataataaaagccttctgtatgtt
ctgatcttcatcttccttattgctgcaattgaggttgcaggatctgtagcagggattttt
ttgataactgatgatttttgttttggagagcatcaacgagttgagccaaatatgacaaag
tactccaacatgtcttcacctggaaaaaaaaatgccatcattgtgaccccgacaggcagc
tattacattctctacatctacgtggccacgtcagagagcctcctcgcaatgggatttttc
cggggtcttccgtttgtgcacactatgatcacaatctctaagaaactgcaccagaagatg
ctgcatgctgttctcagtgcacccatgtctgtgctcaataccatgaagacaggtcgcatc
atgaataggttcaccaaagacatggccaccatagatgacatgcttcctctcctcatgttt
gactttgtccagttgactgtggtggtggttggatgtattcttgtggtgtccattgtgagg
ccatacatattcctcgcagctactcccctggccattattttcattgtgatgaggaagtac
tttctccgcacgggtcaacagcttaaacagctggagacagaagctcgtagccccattttc
tcccacctcatcatctcgctgaagggtttgtggaccatcagggcctttgagcggcaggcg
tacttcgagaacctgttccacaagaccctcaacacccacacagccacctggttcctctac
ctgtcgaccctacgatggttcctcttccgcgctgacatcatctttgtgttctttttcacg
ctgaccgcctggattgcagtaggaaccaaccaggataaaccgggtgagattggtatcgtc
atatgcctggcaatgctcattctaggcaccttccagtggtgtgttgccaccagcattgcg
gtagatggaatgatgcgttccgttgaccgggtttttaagttcatcgacctaccgtctgag
acacccaaaccggacaaaagcaaatgctcagatctgattatcgagaatgccgatgcacag
gctgactcaagctggcccaaccgcggtcacattgatgtgcagaatttaacagtcaaatac
acagaagggggtcacgctgtcctcaagaacctctccttcactgtggagggtagacagagg
gtgggtatcttgggccgaacaggttctgggaagagttctctgttcaatgctctcttaagg
ctggtttacacagatggtgatatctccatcgacggggtcaactggaacaaaatgccactc
cagaagtggaggaaagcctttggtgtgatgcctcagaaagtcttcatctttacgggacca
ttccgcctgaacctagacccttacggttgtcatagtgatgaggagctgtggcgggtcacg
gaggaggtcggtcttaagacagtgattgagcagtttccagacaaactggacttccagctg
gaatacggaggctatgtactgagtaacggccacaaacagctcatctgtctggctcgctcc
atcctcagcggagcacgcatcctcctcctggatgagcctagtgcccaccttgatccaata
acaataaaggtgttaaagaaaacattacgacagtctttctccacgtgcactatattattg
tctgaacacagagtggaaccgctgctcgagtgccagtctttcttgatgatggacaagggt
caggtgaagacctacgattccattcagaagctgctgaatgagaccagtcatctaaagcag
gccataagtccagccgagcgcctcaaactcttccctcgccggaactctagcatgcgcggc
cctcagtccaaactcagctctgttacgcagacactgcaagaggaggcagaggacaatatc
caagacactcgcctctga
DBGET
integrated database retrieval system
