Cyprinus carpio (common carp): 109110491
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Entry
109110491 CDS
T05134
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109110491 (ddx55)
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109110491 (ddx55)
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
Helicases
109110491 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
SBF_like
Helicase_C_2
Cas3-like_C_2
YbjM
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
109110491
NCBI-ProteinID:
XP_042621538
Ensembl:
ENSCCRG00000019303
UniProt:
A0A9Q9YJU1
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All DBs
Position
A10:18376372..18384162
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AA seq
597 aa
AA seq
DB search
MENFSDGKWESLPVKLHDSILQTLKELNFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPALEILLKREEKLKKMQVGALIITPTRELALQISEVMGRFLQGFPQFRQILLIGG
SNPIEDVEKFKTQGANIVIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMG
FEVSLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSVQKTPA
RLSNYYTICRAEEKFNALVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLIKNVSIHCIH
GKMKHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTA
RIGNQGNALVFLLPMEESYVNFLSINQKCPLQLYPPVKDVVDVLPKLKAMALGDRAMFEK
GMKAFVSCVQAYAKHECSLIFRIKDLDFAALARGFALLRLPKMPELRGKTFPDFKQEAIN
TDSIRFKDKNREKQRQKWLADLKEKETPLKKNFIKNKAWSKQKNKKERKKKKASKRKLDE
ESDVDNEDLNELLNDTRLLKKLKKGKISEEDFDKHLSSAGSSRPKPAEVDSSDGDGE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactttagcgatggaaaatgggagagtttgcccgtcaaattacatgacagcata
ttacagactctaaaagagctgaactttacatatatgactcctgttcagtctgcctgcatc
cctctttttatgagtaataaagatgtggctgctgaagccgtgactggcagcgggaaaacc
ctggcgtttgtgattcctgcattagaaattctcttaaaacgagaagagaagttaaaaaag
atgcaggtcggtgcattgatcataacacccacccgtgaactggcactgcagatcagcgag
gtgatgggacgatttctgcaggggtttcctcagttcaggcagattcttttaattggcgga
agcaaccccatcgaggacgtcgagaagtttaagactcagggagctaatatcgtcattgcg
acccccgggcgactggaagacatgttcaggaggaaggccgatgggcttgatttggccaca
gctgtgaagtctctggacgttcttgtcctggatgaagcagacagattgctggacatgggc
tttgaagtcagtttaaacactattctggggtatttacccaagcagcggcgtacagggctt
ttctctgccacacagacgcaagagctggagaagttggtgagggctggtctgcgcaaccct
gtgcggatcacagtgaaggagaaaggtgtagcagcctcgagcgtgcagaaaacaccagcc
agactcagcaattattacacaatctgtcgggctgaggagaagttcaacgctttggtggcg
tttctcagacagcacaaacatgagaagcagctcgtgttcttcagcacctgcgcctgtgtg
gagtacttcggtaaagccctggaagtcttgatcaagaatgtcagcatccactgcatccac
gggaagatgaagcataaacgaaacaagatctttgcagatttccgggcgctgaagagtggg
attctcgtgtgcacagatgtcatggcgagaggcatcgacataccggaagtgaactgggtg
cttcagtacgaccctccaagcagtgcaagttcctttgtgcatcggtgcggacgaactgca
cggatcggaaaccagggcaatgcactcgtctttcttctgccaatggaagagtcgtatgtt
aatttcttgtccattaatcaaaagtgtccacttcagctgtatcctccagtgaaagatgtg
gttgatgttctgcctaaactgaaggcgatggctttaggtgacagagcgatgtttgagaag
ggcatgaaagcctttgtgtcgtgtgtgcaggcgtacgccaaacacgagtgtagtctgata
tttcgcattaaagatctggattttgctgctctggcccgtggctttgctcttctccgtttg
cccaaaatgcctgaactgagaggaaagaccttcccggacttcaaacaggaggccatcaac
acagactccatccggtttaaagataagaaccgggaaaaacagagacaaaaatggctggca
gatctgaaagaaaaagagacgccattgaagaagaacttcattaagaacaaagcctggtcg
aagcagaagaacaagaaggaaagaaagaaaaagaaagcttccaaaagaaaactggatgag
gaatcagatgttgataacgaagacttaaacgagcttttaaatgacacgcgtctgctgaag
aaactcaagaaggggaagatcagtgaagaggactttgacaagcacttgagttccgccggc
agctcacgtcccaaaccagcagaagtggacagttctgatggagacggagagtga
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