Cyprinus carpio (common carp): 109110540 Help Entry 109110540         CDS       T05134                                  Name (RefSeq) dmX-like protein 2 isoform X1   KO K24155   rabconnectin-3a Organism ccar  Cyprinus carpio (common carp) Pathway ccar04142   Lysosome Brite KEGG Orthology (KO) [BR:ccar00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     109110540  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccar04131]     109110540 Membrane trafficking [BR:ccar04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     109110540  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     109110540    RAVE complex     109110540 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40_Prp19 Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR3_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_Gbeta Beta-prop_HPS5 Beta-prop_EML Beta-prop_DCAF12 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_LRRK2 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_WDR19_1st VPS11_N NBCH_WD40 Beta-prop_RIG_1st Motif Other DBs NCBI-GeneID:  109110540 NCBI-ProteinID:  XP_042599597 Ensembl:  ENSCCRG00000006058 UniProt:  A0A9Q9XD33 LinkDB All DBs Position B18:7240116..7307467 Genome browser AA seq 3060 aa AA seqDB search MHLHQVLTGAVNPGDCCYSVGSVHDVPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQV GCVECSQQLGRIAASYGNTVCIFEPIASNPNKRHKQLNYQWQKTGQFFLNAITYNLAWDP QGNRILAATEHLQLWAPPTSDALIEEEDSQLNDDRAHELMLNDWKCIWQCKTAAAVHITQ WSPDGEYFATAGKDDCLLKVWYPTTGWKSAVVMPDVTDKKIQAIHFSFVYLAHPRTVTGF SWRKTSKYMPKGSVCNVLLTSCADGICRLWSETLLPEDSLLGGQISENSSSFSSSLPNIA QKDKIQHALESIHHLKHLRRGRRRSSALVAHTELLPSQLGSHETHRHISHHANALCHFHI SASINPNTDIPAMLAGSGLFSEDVSGGFVVHWLNNKDLSFTTSMDLFMQQLRKLSEQHLE QATEDFEQEGAAKFDFDLDDMSDKGSSEHEEGDQEGSTKASSPGSSSSAPLPSVLLDRKL ETLILEWNKSPDMLFTIHPHDGSFLVWHIKYLDEFIPGIFRQVQVSFSSRIPVAFPTGDA NSLSKNIMMYACTFMDQDNCSALEDKRSERRVPQSASASAGLSALGHSLAAVIGPAVMMV SKHVDGSLNQWAVTFAEKSAFSNVLTVSHKFRYCGHRFHLNDLACHTVLPLLLTSSHHNA LLTPSGSGNVDGDQNGGVALQPTRPMRGIPRKQLRNAATLTFHDPNAIYSELILWRVDHI GPLSCTGGVSELARINSLHTSAFSNVAWLPTLIPSSVLGTYCNSASACFVASDGKNLRLY QAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGSNTQLLHVF QEDFILGYKPHEDIPDFNITSVPSGQEYQPPPFSEKFFLVVIEKDANRNSVLQMWHLHLR SVQACVEEPINEHVFQNQLTVPLNQNYGDSSPDTTPGHSPLPRSSSSANLQSASKLILSS KLVYSQRLDLPPGVELIRATPSAGHLSSSSIYPVCLAPYLIVTNCSDGRVRFWHCRVDMD LSVPHLKETRLYRWEHWRLLKEEEDNDSSVSVAGRPVAVSCSYTGRLAVSFKQILPENEG GMLQDFSMLVSIYECESTGGSEWVLEQTIHLDDFSKPVKTLDPRVSVDSNLFVYSKSDLF ITKDSPNVKHFVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVTEQTSVKDGMAVTLPL GGSIKQGIRSRWVLLRSVNLVSSVDGTPSLPVSLSWVRDGILVVGMDCEMHVYAQWRQDE KPGDSDDNNISSPDGVGGRTMYVSNEGRARSKSVFEGSAGIDDALRPPAVIQDGGLFEAA HSLSPTLPQYHPTQLLELMDLGRVRRAKAILAHLVKCIAGEVAVVRDVEAGEGGARRHLS RTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYALLSADQDTSYKMGDEVGKAGKGA ERETQKQPEDQYADLFQVQAVTTDDFMNFAAEKPEKKSRVINLSQYGPTYFGPEHAQVLS SHLMHSSLPGLTPLEQMFLVALADTVATTSAEVAGPTDKQYTGGEALDECGLRYLLAMRL HTCLLTSLPPLYRMQLLHQGVSTCHFAWAFHSEAEEEMLNLIPAMQRGDPQWSELRAVGV GWWIRNINTLRRIVEKVAKAAFQRHNDPLDAALFYLAMKKKAVLWGLFRSQNNEKMTQFF SHNFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIVVCLEKMEDIQLAMIVA RLYEADYESSSTCQGILYEKVLGCNRDGSGFSCTKLHPDPFLRSIAYWIMKDYTRALDTL LEQIYKEDDENPDVLVKSCNPVVFSFYNYLRAHPLIIRRHFAKPEASSVAAGLTSERNSA DEINLIERKLFFTTANAHFKVGCPLLALEVLSKIPKVTKKASSLSKGSSVANVSGAQPQE NGGKASDLDWGAPAVPSQALGADSSTILDWSQPMVKIEDEGLQLDWGDDKEEDEDEEGGL TMKKPEVEDEEAKKPSKSAALQHEDSTGESGVDVIAEQLKFRACLKILMTELRTLATGYE VDGGKLRFQLYNWLEKEIEATHHICNYKFEGKAAAGQLEKWGEDGSLDLEDSQIRGEAGA YERHQMERRRLQAKQLHAERRKAWLRENQALLRVFLSYCSLHGAKGGGVTSVRMELLFLL QESQQEMTVKQLQSPLPLPTTLPLLSASIAPTKTVIANPVLHLRNHIHDILYTIVQMEAP PHPDILDDRVNALHTLAASLSACIYQSLCDSHSYSSQSEANQFTGMVYQGLLLSDRRRLR TESIEEHATPTSAPAQWPGVSSLISLLACAQGDDHIRLNVMLCEAVVAVYLSLLIHGLGT HSGNELFRLAAHPLNNRMWAAVFGGGAKLIVKPKRPPEITPANLESSRQTKFQSENTPAL PPPTPPAEDVDRQRRRFNMRMLVPGRPVKETPATPPPIPVERPTYKEKFIPPELSMWDYF VAKPFLPLSDSGALCDSDESGGSDNEDDDDAFLSDTQMTEHSEPNSYSWSLIRLVMVKLA LHNVKTFLPLTGLDFTELPVTSPLANAVLKTLENWEQILLEKMNKFDGPPPNYINTYPTD LSAGGGPAILRHKAMLEPDNTPFKSKHRFSFPARRLWHFLVKQEVLQETLIRYIFTKKRK QSESLDDHVDRLIQNYVTGARKTNKVEADMGYPGGKAKIIHKESDIIMAFAINKANTNEI VLASTHDVQEVDVSTLLAAQPYTWIGEDFDKESRSSDDVDYRSSHTNIAQASASPFAPQQ MAASSSMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQ QLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHSKSCG DFTFITSSSLIATAGQSNDGRNVCLWDTLVSPSNSMIHAFQCHENGATVLQYAPKQQLII TGGRKGFVCIFDIRQRQLLHTFQAHDSAIKALAMDSAEDFFVTGSAEGNMKVWKLAGHGL MHSFSTEHAKQSIFRNIGAGVMQIEACPGNRIFTCGADGTLKMRVLPDRYNIPASIFQIL NT seq 9183 nt NT seq  +upstreamnt  +downstreamnt atgcatctgcaccaggtgctgacgggggctgttaacccgggggactgctgttactccgtg ggaagcgtccacgacgtcccgttcacggcctatggctcaggctgtgatatcgtgatcctt gcaagtgattttgagtgtgttcaaattattcctggagctcagaatggaaacatccaggtg ggctgtgtggagtgctcacagcagcttggccggattgctgcatcctatggaaataccgtt tgtatttttgaaccaatagcttccaacccaaacaaacgtcacaagcaactgaattaccag tggcagaagactggtcagttctttctcaatgctataacctacaatctggcctgggacccg caaggcaatcgtatcttggcagcgactgagcatttgcagctgtgggctcctcccaccagt gacgcgctgatagaggaagaggacagtcagctgaatgatgacagagctcatgagctgatg ctcaacgactggaaatgtatctggcagtgcaagactgctgctgctgttcatattactcag tggtctccagatggagaatatttcgccacagctggaaaggatgactgtctgctgaaggtg tggtatcccaccacaggatggaagtctgcagtggtgatgccggacgtgactgataaaaag atccaagcgattcatttctcatttgtgtatctggcgcatccacgtacagtcacaggcttc tcctggaggaaaaccagtaaatatatgcccaagggctctgtgtgtaacgtgttgctgacg tcctgcgcggatggcatctgtcgtctgtggagtgagaccctcttgcctgaggacagtctg ctgggggggcagatctcagagaacagcagcagcttcagctcctctctgccaaacatagct cagaaagacaagatacagcacgctctggagtctatccaccacctcaagcacctgcgtagg gggcgcaggagatcgtccgccctggtggcccacactgagctgctgcccagccagctgggg tcccacgaaactcaccgccacatctcacaccacgccaacgccctctgccacttccacatc tctgccagcatcaatcccaacacagatatccccgcaatgctggctggatcaggcctgttc tctgaggacgtcagcggagggtttgtggttcactggctgaataataaagatctgagcttc accacctccatggacctgttcatgcagcagctgcgcaaactttctgagcaacacctggag caagccactgaagactttgagcaggagggggcagccaagtttgacttcgatctggatgat atgtctgataagggctcttcagagcatgaggagggagatcaggagggcagcaccaaggcc tcttctcctggttcgagcagcagtgctcctctaccctctgttttgctggatcggaaactg gagactctcatcctggagtggaacaaaagtccagacatgctcttcactattcacccacac gatggatccttcctcgtctggcacatcaaatacctggatgagtttatacctggcatcttt agacaggttcaggtgtcgttctcctctcgtattccggtagcgttccccacaggtgatgct aactcccttagtaagaacatcatgatgtacgcgtgtacgtttatggaccaagacaactgc agtgctctggaggataagagaagcgagcggcgggttcctcagagtgcatctgcgtccgcc gggctcagtgctcttggacactctcttgctgctgtcatcggccctgctgtcatgatggtt tccaaacacgtggacggctcgctcaaccaatgggctgtgacctttgctgagaagtccgcc ttttcgaacgtcctcacagtttcgcacaaattccgttactgcggacaccgtttccatcta aatgatttggcttgtcacacggtacttcccttgctgctgacgtcatctcatcacaatgca ctgttgacgccctctggatctggaaacgttgatggagatcagaatgggggcgtggcttta caacccaccaggccaatgagaggcattccccgtaaacaactgcgaaatgcagccacgctt acattccacgaccccaatgcgatctacagtgagctgatcctctggagagtcgatcacatt ggcccactctcctgcacagggggcgtgtcggagctagcacgaatcaactcgctgcacaca tctgcattctccaatgtggcctggctgccaacactcatccctagctcagtgcttggaacg tactgtaactcagcaagtgcgtgctttgtggcatctgatggtaaaaacctgcgtctgtat caggctgtggtggatgcccgcaaattgctggatgaactctccgacccagagacctctaaa ctggtgggtgaagtattcaacattgtgagtcagcagtccactgcccggcccggctgcatc atagagctggatgtcattactaaccagtgtggctcaaacacacagctgcttcacgtattc caggaggattttattttaggttacaaaccacatgaagacattccagatttcaacattacc agtgttccctctgggcaagagtaccagccccctcctttctcagaaaagttcttcctggtg gtgatcgagaaggatgcaaatcggaactcagtgttacagatgtggcatcttcatctgcgc tctgtgcaggcgtgtgtggaagagccaataaatgagcacgtgttccagaaccagctgaca gttcctttgaatcagaactatggtgactcatctcctgacaccactccaggtcatagtcca ctgcctcgctcctcctcttccgccaacctgcagtcagccagcaaactcatcctgagctct aaactggtctacagtcagcggttagaccttccaccaggggtggagctaatcagagccaca ccctctgccggtcacttgagctcctcatctatctaccctgtgtgtttggctccatacttg attgtgaccaactgttctgatggacgcgtcaggttctggcactgtagggtggatatggat ttatcagtgccacacctcaaagagacacgtttatatcggtgggagcactggagactcttg aaagaggaagaggacaacgacagttctgtgagtgttgcaggtcgacccgttgccgtaagc tgctcctacactggaagacttgctgtgtcgttcaaacagattctgcctgagaacgaaggt ggcatgcttcaggacttctccatgcttgtatcgatctacgagtgtgagtcgacaggtggc tcagagtgggtcctggagcagacgattcaccttgatgattttagcaaacctgtgaaaacg ctagatccacgtgttagtgttgatagcaatttgtttgtctatagcaagtcagatttgttt ataaccaaagacagccccaatgtcaaacactttgtgcacctagactggctgtctaaagaa gatgggtcgcacatcctgacggtcggggttggatccaacatccttatgtatggacgcatc tcaggggttgtcacagagcagacatcagtgaaggatggcatggcagtcaccctgcctcta gggggcagtataaagcagggaattcgctctcgttgggtgctgctgaggtccgtaaacctt gtctcttccgtggacggtaccccatccctgccggtgtccctatcctgggtgcgtgacggc atcctggtggtgggcatggattgtgagatgcatgtttatgcacagtggaggcaggatgag aaaccgggcgactctgacgacaacaacatctcatccccagatggcgttggaggtcgcact atgtacgtttcaaatgagggcagagcgcgatctaagagtgtcttcgagggaagtgcggga attgatgatgcgttacgccccccagcagtgattcaagatggtggtttgtttgaggcggcc cattcattgtcgcccactcttccgcagtaccatccaacacagcttctagagcttatggac cttggaagggtacgtcgtgccaaggccattttggcacacctggtcaagtgcattgctggt gaagttgcagtggtaagggacgtagaagcaggtgagggtggtgccaggagacacctatct cgaaccatcagcgtgacgggtagcacggcaaaagacactattgttgctggtcgagatggt gggcgagattacacagaaatcaattccatacctcctcttccgctatatgccctgctgtct gcggaccaggacacctcttacaagatgggagatgaagtgggaaaagctggaaaaggggca gaacgtgagacacagaaacaaccagaggatcagtatgctgatctgtttcaggtgcaggct gtcacaaccgacgatttcatgaactttgctgcagagaaaccagagaagaagtctcgcgtg attaacctatcacagtacggccccacgtactttggccctgaacacgcacaggtgctgtct tcacatcttatgcactccagcctgccaggtctcacaccccttgagcagatgttccttgtg gctcttgccgatactgtggcgaccactagtgcagaagtagcaggacccacagataaacag tacactggtggagaggctctagatgagtgtggcctacgttacctgctggccatgaggtta catacgtgtctgctgacatccctgcccccactctacaggatgcagctacttcatcagggt gtgtccacttgtcactttgcatgggcgttccattcagaagctgaggaggagatgctgaac ctgattcctgccatgcagagaggagatccgcagtggtctgagctcagggcggtgggtgtc ggctggtggatcagaaacattaacacactgaggcggattgtggagaaggtagccaaagca gcatttcagaggcataatgatccactggatgcggctctcttctatctggccatgaagaag aaggctgttctctggggtctctttaggtctcaaaataatgagaagatgacccagtttttc agccataacttcagtgaggatcgctggaggaaggcggctttaaagaacgccttctctctc ctgggcaaacagcgctttgagcagtcggctgcatttttcctgcttgctggctccctgaaa gatgccattgtggtttgtctggagaaaatggaggacatccagcttgcgatgattgtcgct cgtctttacgaggctgattacgagagttcctccacctgccagggtatcctgtacgagaag gttctcggctgcaacagagatggaagtgggttctcctgtaccaaactgcaccctgacccg ttcctaagaagcattgcgtactggatcatgaaggactacaccagagccctggacacactg ctggagcagatttacaaagaggatgatgaaaaccctgatgttctggtgaaatcgtgtaat cctgtcgtctttagtttctataactacttgcgtgcacaccctctgattattcgacggcat tttgccaagcccgaagcatcttcggttgcagctggtctaacatcagaacgcaacagcgca gacgaaataaaccttatagagcggaaactcttcttcaccaccgctaacgctcactttaag gtgggctgcccactcctggcccttgaggtcttatccaaaatccctaaagtcactaagaaa gcatcttctctgagtaagggctcttctgtggccaacgtcagtggtgcccagccccaggag aatggaggaaaggcttcagatctcgactggggagctcctgccgtccccagccaggccttg ggagcagactcctccaccatactggactggagtcaaccgatggttaaaattgaagatgag ggtctacagttggactggggtgatgataaggaagaagatgaggatgaagagggtgggctg acaatgaagaaaccggaggtggaggatgaggaggctaaaaagccatccaaatcagcagcc ctgcagcatgaagactcaacgggcgagtctggggtggacgtgatcgccgaacagctgaag ttccgagcctgtttgaagatcctcatgacggagctgcggacgctggcaacaggatatgag gtggatggtggcaagctacgatttcagctctacaactggctggagaaagaaatcgaggcc acgcaccacatctgcaactataagtttgaaggaaaagcagctgcaggtcagctggagaag tggggtgaagatggatctctggacctggaagactcacaaatccggggtgaagcaggtgcg tatgaacgtcatcagatggagcgacggcgtttgcaggccaagcagctgcatgcagagagg aggaaagcctggctgagagagaatcaggctctgctcagagtcttcctcagttactgcagt ctacacggagccaagggtggaggagtgacgtctgtcaggatggagctactcttcctgctg caggaatctcagcaagaaatgacagtgaagcagcttcagtcgccactccccctccccacc actctgcctctgctgtcagccagcatcgcccccaccaagactgtcatcgccaaccctgtc ctgcatctcagaaaccacatacatgatatcctctacaccattgtccagatggaggctcca ccacacccagacatactggatgaccgggtgaatgctttacacacactcgctgcttctcta tcagcctgtatctaccagtcgctatgtgacagccacagctacagcagtcaatcggaggcc aatcagttcacagggatggtgtatcaggggctgttactgagcgacaggcgtagacttcgc actgagagcattgaggaacatgcaacacccacctctgcccctgcacagtggccaggtgtg tcgtctctgatcagtctgctggcgtgtgctcagggtgatgatcacattcgtctgaatgtc atgttgtgtgaggcagtggtggctgtttatctcagtctgctgattcatggtcttggaaca cactctggaaacgagctcttccgactggccgctcatcccctcaacaaccgcatgtgggcc gctgtgtttgggggaggagccaaacttattgtcaaacccaagcggccacctgaaatcact ccagccaatttggagtcaagcaggcagacaaagttccagtctgagaatacaccagcatta cctcccccaacccctcccgctgaggatgtggaccgacagcggcgcaggtttaacatgcgc atgcttgttcctggacgtcccgttaaagagactcctgccacacctccacccatccctgta gaacggcccacctataaggagaaattcattccaccagagctcagcatgtgggattacttt gtggccaaacctttccttcctctctctgacagcggggcactgtgtgattcagatgagagc ggtggtagtgacaatgaggatgatgatgatgccttcctctcagacacacagatgaccgaa cactccgaaccaaactcctacagttggtctctgatccgcctagtgatggtcaaacttgcc ctgcacaatgtcaagacattcctgcccctgacaggactggatttcacagagttgccagtg acgtctcccctggccaatgctgtgctgaagacactggaaaactgggaacagattctcttg gaaaaaatgaacaaatttgatggccctccaccaaactacatcaacacctaccccacagac ctgagtgcagggggaggaccagctatactccgacacaaagccatgctagagccagataac acaccgttcaagtcgaagcaccgtttctccttccctgctcgccgtctgtggcattttctg gtcaaacaggaggtgctccaggagactttgattcgatacatcttcacaaagaaaaggaag cagagtgagtctttagatgatcatgtggaccgcctcatacaaaactacgttactggagct cgaaaaaccaacaaggtggaggctgatatgggttacccaggaggcaaagcgaaaatcatc cataaagaatccgatatcatcatggcatttgccattaacaaggctaacactaatgaaata gtgctggcgtccactcatgatgtccaggaagtggacgtgtccacgttgctcgcagctcag ccttacacctggatcggagaggactttgacaaggaatctcgcagttctgatgatgtggat taccgctcgtcacacaccaacatcgcccaggccagtgctagtccctttgccccccaacaa atggcagcatcatcctccatgccatggctgggcagcggacagaccagcatgggtgccagt gtgatcatgaagaggaacctgaataacgtgaagagaatgacgtctcatcccatctatcag tactacatgacgggtgctcaggacggcagtgtgaggatgtttgagtggaatcgtccacag cagctcatctgtttcagacaggccggaaacgctcgagtaacgcgcctctatttcaactca cagggcaacaagtgtggtgttgcagatggcgagggctttttgagcctctggcaagtcaat cagacctcctcaaaccccaaaccgtatttgagctggcagtgtcacagtaaaagctgcggt gatttcaccttcattacatcctccagtctgatcgccacagcaggacagtccaatgatggc aggaatgtttgtttatgggacactctggtctctccaagtaactcaatgatacatgcattc caatgccatgagaatggtgcaacggttcttcaatatgctcctaaacagcagctaataatc acgggcggccggaagggattcgtctgtatttttgacatccgtcagagacagctgctccac acattccaggctcatgattcggccatcaaagcgctggccatggattccgctgaagacttc tttgtcaccggctcagccgaagggaacatgaaggtctggaagttggcgggtcacggtctc atgcactccttcagcacagagcacgctaaacaatccatattccgaaacatcggtgctggt gtgatgcaaatcgaagcctgcccaggcaaccggatcttcacctgcggagccgatgggacc ctgaaaatgagggtccttccagaccgctacaacattccggccagtatattccagatcctc taa

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