Cyprinus carpio (common carp): 109110544
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Entry
109110544 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109110544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109110544
Membrane trafficking [BR:
ccar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109110544
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
109110544
RAVE complex
109110544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_Gbeta
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
eIF2A
Beta-prop_ACSF4
VPS11_N
Beta-prop_LRRK2
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
109110544
NCBI-ProteinID:
XP_042630896
Ensembl:
ENSCCRG00000017867
UniProt:
A0A9Q9Z3V0
LinkDB
All DBs
Position
A18:8475166..8554135
Genome browser
AA seq
3038 aa
AA seq
DB search
MHLHQVRVTGAVNPGDCCYSVGSVHDIPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQ
VGCVECSQQLGRIAASYGNTVCIFEPIASNPNKRYKQLNYQWQKTGQFFLNAITYNLAWD
PQGNRILAATECLQLWAPPTSDTLIEEEDSQLNDDTAHEIILNDWKCVWQCRTAAAVQIT
QWSPDGEYFATAGKDDCLLKVWYPTTGWKSAVVMPDVTDKKIPAVHFSFVYLAHPRMVTG
FSWRKTSKYMPKGSVCNVLLTSCADGICRLWSETLLPEDSLLGGQISENSTSFSSSLPNI
AQKDKIQHALESIHHLKHLRRGRRRSSALVAHTELLPSQLGSHETHRHISHHANALCHFH
ISASINPNTDIPAALAGSGLFSEDISGGFMVHWLNNKDLSFTTSMDLFMQLLRKLSEQHL
EQPTEDFEQEGTAKFDFDLDEMSDKGSSEHEEADQEGSTKASSPGSSSSVPLPSVLLDRK
LDALILEWNKSPDMLFTIHPLDGSFLVWHVKYLDEFIPGIFRQVQVNLSSRIPVAFPTGD
ANSLSKNIMMYTCNFYVDQEYCNALEDKRSERRVPQSASASAGLSAFGHSLTAVIGPAVM
MVSKHVMGSLNQWAVTFAEKSAFSNVPHTVSHKFRYCGHRFHLNDLACQAHSPLPLLLTS
SHQQCILTPPSGSGSIDGDQNGGVALQPTRPMRGVPCKQLRNAATRTFHDPNAIYSELIL
WRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGSYCNSASACFVASDG
KNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGSNT
QLLHVFQEDFILGYKPHEDIPDFSSTSVPSAEEYQPPPFSEKFYLVVIEKDANQNSVLQM
WHLHLRSVQACVEEPVNDHVFQNQLTVPLSQNYGDSSPDTTPAHSQLPRSSSSANLQSAS
KLILSSKLVYSQRLDLPPGVELISATPSAGHLSSSSIYPVCLAPYLIVTTCSDGRVRFWH
CRVDMELSAPHPEETRRSYRWEQWSLLKEEDIDSSVCVAGRPVAVSCSYTGRLAVSFKQM
SPENEGGMPQDFSMLVSIYECESTGGSEWVLEQTIHLDDFSKPVKTLDPCVSVDSNLVVY
SKSDLFVTKDSPNIKHFVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVTEQTGVKDGM
AVTLPLGGSIKQGIRSRWVLLRSVNLVSSVDGTPSLPVSLSWVRDGILVVGMDCEMQVFA
QWGGKTKKPGYSDNNIISSPEGIGGRIVSVSNEGRARSKSVFEGSAGIDEALRPPAVIQD
GGLFEAAHSLSPTLPQYHPTQLLELMDLGRVRRAKAILAHLVKCIAGEVAVVRDVEAGEG
GARRHLSRTISVTGSTAKDIIVAGRDGGRDYTEINSIPPLPLYALLSADQDTSYKXWERK
REKGADRETQKQPEDQYSDLFQVQTVTTDDFVSFAAEKPEKKSRVINLSQYGPTYFGPEH
AQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVAGPTDKQYTGGDALDECGLRYL
LAMRLHTCLLTSLPPLYRMQLLHQGVSTCHFAWAFHSEAEEEMLNMIPAMQRGDPQWSEL
RAVGAGWWVRNINTLRRMVEKVAKAAFQRHSDPLDAALFYLAMKKKAVLWGLFRSQHDEK
MTQFFSHNFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQL
AMIVARLHEADYESSSTCQGILYEKVLGCNRDGSGFSCTKLHPDPFLRSIAYWIMKDYTR
ALDTLLEQIYKEDDQNPDVLVKSCNPVVFSFYNYLRAHPLIIRRHFAKPEASGVAVGITS
ERNCADEINLIERKLFFTTANAHFKVGCPLLALEVLSKIPKVTKKASSLSKGSSVANVSA
PQPQENGGKASDFAWGTESSAGLDWSQPMVKMEDEGLQLDWGYDKEEDEDEEGGLTMKKP
EVEDEDAKKPSKSAAVQREDSKGESEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGK
LRFQLNWLEKEIEAMHYICNYKFEGKAAAGQLEKWGDDASLDLEDSQIRGEAGAYERHQM
ERRRLQAKQLHAERRKSWLRENQALLRVFLSYCSLHGAKGGGVTSVRMELLFLLQESQQE
MTVKQLQSPLPLPTTLPLLSASIAPTKTVIANPVLHLRNHIHDILYTIVQMEAPPHPDVL
DDRVNALHTLAASLSACIYQSLCDSHSYSSQSETNQFTGMVYQGLLLSDRRRLRTESIEE
HATPTSAPAQWPGVSSLISLLACAQGDDQIRLNVMLCEAVVAVYLSLLIHGLGTHSGNEL
FRLAAHPLNNRMWAAVFGGGAKLIVRPKRPPEITPAVPPPAPPAEDVDRQRRRFNMRMLV
PGRPVKETPATPPPIPVERPTYKEKFIPPELSMWDYFVAKPFLPLSDSGALYDSDESGGS
DNEDDDDDAFLSDTQMTEHSDPNSYSWSLIRLVMVKLALHNVKTFLPLTGLDFTELPVTS
PLANAMLKTLENWEQILLEKMNKFDSPPPNYINTFPTDLSAGGGPAILRHKAMLEPDNTP
FKSKHRLSFPARRLWHFLVKQEVLQETLIRYIFTKKRKQSESLDDHVDHLIQNYVTGARK
TNKVEADMGYPGGKAKIIHKESDIIMAFAINKANTNELVLASTHDVQEVDVSSLLAAQPY
TWIGEDFDKESRSSDDVDYRSSHTNIAQASASPFAPQQMAASSSMPWLGSGQTSMGASVI
MKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAGNARVTRLYFNSQG
NKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHSKSCSDFAFITSSSLIATAGQSNDGRN
VCLWDTLISPSNSMIHAFQCHENGATVLQYAPKQQLIITGGRKGFVCIFDIRQRQLLHTF
QAHDSTIKAMAMDSTEDFFVTGSAEGNMKVWKLAGHGLMHSFSTEHAKQSIFRNIGAGVM
KIETCPGNRIFTCGADGTLKMRVLPDRCNIPASIFQIL
NT seq
9117 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtgcgggtgactggggccgttaacccgggggactgctgctactcc
gtgggaagcgtccacgacatcccgttcacggcctatggctcaggctgtgatatcgtgatc
cttgcaagtgattttgagtgtgttcaaattattcctggagctcagaatggaaacatccag
gtgggctgtgtggagtgctctcagcagctcggccggattgctgcgtcttatggaaatact
gtttgtatttttgaaccaattgcttccaacccaaacaaacgttacaagcaattgaattac
caatggcaaaagactggtcagttctttctcaatgctataacctacaatctggcctgggac
ccccaaggcaatcgtatcttggcagcaactgagtgtttgcagctgtgggctcctccgacc
agtgacacgctgatagaggaagaggacagtcagctgaatgatgacacagctcatgagatc
atactcaacgactggaaatgtgtctggcagtgcagaactgctgctgctgttcagatcact
cagtggtctccagatggggaatacttcgccacagctggaaaggatgactgcctgctgaag
gtgtggtatcctaccacaggatggaagtctgcagtggtgatgccagacgtgactgataaa
aagatcccagcggttcatttctcctttgtgtatctggcacatccacgtatggtcacaggc
ttctcctggaggaagaccagtaaatatatgcccaagggctctgtgtgtaacgtgttgctg
acgtcctgcgcggatggcatctgtcgtctgtggagtgagacccttttgcctgaggacagt
ctgttgggggggcagatctcggagaacagcaccagcttcagctcctctctgccaaacatc
gctcagaaagacaagatacagcacgctctcgagtctatccaccacctcaagcacctgcgc
aggggccgcagaagatcgtctgccctggtagcccacacagagctgctgcccagccagctg
ggatcccacgaaactcaccgccacatttcacaccacgccaacgccctctgccatttccac
atctctgccagcatcaatcccaacacagatatccccgcagcgctggctggatcgggactg
ttttctgaggacatcagtggagggtttatggttcactggctgaataataaagatctgagc
ttcaccacctccatggacctgttcatgcagctgctgcgcaaactttctgaacaacacctg
gaacagcccactgaagactttgagcaggaggggacagccaagtttgacttcgatctggat
gagatgtctgataagggctcttcagagcatgaggaggcagatcaggagggcagcaccaag
gcctcttctccaggttcgagcagcagtgttcctctgccctctgttttgctggatcggaag
ctggatgctctcatcctggagtggaacaagagtccagacatgcttttcactattcacccg
ctcgatggatctttccttgtctggcatgtcaagtacctggatgagtttatacctggcatc
ttcagacaggttcaggtaaatctctcctctcgtatcccagtggcgttccccactggggat
gctaactccctcagtaagaacatcatgatgtacacctgtaacttttatgtggaccaagag
tattgtaacgctctggaggataagagaagtgagcggcgggttcctcagagtgcatctgcg
tccgcggggctcagtgcttttggacactctctcactgctgtcatcggcccagctgtcatg
atggtgtccaaacacgtgatgggatcgctcaaccaatgggctgtaacctttgctgagaag
tccgccttttcgaatgtccctcacacagtttcgcacaagttccgttactgcggccaccgt
ttccatctcaatgatttggcttgtcaggcacacagtccccttcccttactgctgacatca
tctcatcaacaatgcattttgactccaccctctggatctggaagcattgatggagatcag
aatgggggcgtagctctacaacccaccaggccaatgagaggcgttccttgtaaacagttg
cgaaatgcagccacacgtacgttccatgacccgaatgcgatctacagtgagctgatcctc
tggagagtcgatcatattggccccctctcctgcacagggggcgtgtcagagctagcacga
atcaactcgctccacacatctgcgttctccaacgtggcctggctgccaacactcgtccct
agctcagtgcttggatcatactgtaactcagctagtgcgtgctttgtggcgtctgatggt
aaaaacctgcgtctgtatcaggctgtggtggatgcccgcaaactactggatgaactctcc
gacccagagacctctaaactggtgggtgaagtattcaacattgtgagtcagcagtccact
gcccgacccggctgcatcatagagctggatgtcattactaaccagtgtggctcaaacaca
cagctgctccacgtatttcaggaggattttattttaggctacaaaccacatgaagacatc
ccagatttcagcagtactagtgttccctctgcagaagagtaccagccccctcctttctca
gaaaagttctacctggtggtgatcgagaaggatgcaaatcagaactccgtattacagatg
tggcatcttcatctgcgctcggttcaggcatgtgtggaagagccagtaaatgaccatgtg
ttccagaaccagctgacagttcctttgagtcagaactatggtgactcatctcctgacacc
actccagctcatagtcagctgcctcgctcctcctcttctgccaacctgcagtcagccagc
aaactcatcctgagctctaaactggtctacagtcagcgtctagaccttccaccaggggtg
gagctaatcagtgctacgccttctgccggtcacttgagctcctcgtctatctaccctgtg
tgtttggctccatacctgattgtgaccacctgttctgatggacgtgtcaggttctggcac
tgtagggttgacatggaattatcagcaccacaccccgaagagacacgtcgttcatatcgg
tgggagcaatggagtctcttgaaagaggaagacatcgacagctctgtgtgtgttgcgggc
cgacccgttgcagtcagctgctcctacacgggaagacttgctgtgtcgttcaaacagatg
tcgcctgagaatgagggtggcatgcctcaggacttctccatgcttgtatccatctatgag
tgtgagtcgacgggtggctcggagtgggtcctggaacagacaattcacctcgatgatttt
agcaaacctgtgaaaacgctagatccatgtgtcagtgttgatagcaatttagttgtctat
agcaaatcagatctgtttgtaaccaaagacagccctaatatcaaacactttgtgcacttg
gactggctgtcaaaagaagatgggtcgcacatcctgacggtcggggttggatccaacatc
cttatgtatggacgcatctcaggggttgtcacagagcagacaggagtgaaggatggcatg
gcagtcaccctgcctctagggggcagtataaagcagggaattcgctctcgttgggtgctt
ctgaggtcagtaaacctcgtctcttccgtggatggtaccccatccctgccggtgtcccta
tcctgggtgcgtgatggcattctggtggtgggcatggattgcgagatgcaggtttttgca
cagtggggaggcaagacgaaaaaaccgggctactcagacaacaacattatctcatcccca
gagggcattggaggtcgcattgtgtctgtttcaaatgagggcagagcacgatctaagagt
gtcttcgagggtagtgcaggaattgatgaagcgttacgccccccagcagtgattcaggat
ggaggcttgtttgaagctgcccattcattgtcgcccactcttccacaataccatccaacc
cagttgctagagcttatggaccttggaagggtacgtcgtgctaaggccattttggcacac
ttggtcaagtgcattgctggagaagttgcagtggtgagggatgtggaagcaggtgagggt
ggtgccaggaggcatctatcccgaaccatcagcgtgacaggtagcacggcaaaagacatt
atcgttgctggccgagatggtgggcgagattacaccgaaatcaactccattccccctctt
ccgctatacgccctgctgtctgcagaccaggacacctcttacaagnnatgggagaggaag
cgggaaaaaggggcagatcgtgagacacagaaacaaccagaggatcagtactctgatctg
tttcaggtgcagactgtcaccactgacgattttgtgagctttgctgcagagaaaccagag
aagaagtctcgtgtgattaacctatcacagtacggccccacgtactttggccctgaacac
gcacaagtgctgtcttcacatcttatgcactccagcctgccaggtctcacacgccttgag
cagatgttcctcgtggctcttgccgatactgtggcgactacaagtgcagaagtagcagga
cccacagataaacagtacactggtggagatgctctagatgagtgtggtctacgttacctg
ctggccatgaggttacatacctgtctgctgacatccctgcccccactctacaggatgcag
ctactgcatcagggtgtgtccacatgtcactttgcatgggcgttccactcagaagctgag
gaggagatgctgaacatgattcctgccatgcagagaggagatccgcagtggtctgagctc
agggctgtgggcgccggttggtgggtcagaaacataaatacactgaggcggatggtggag
aaggtagccaaagcagcatttcagaggcatagtgatccgctggatgcagctctattctat
ctggccatgaagaagaaggctgttctctggggtctctttaggtctcaacatgatgagaag
atgacccagtttttcagccataacttcagtgaggaccgctggaggaaggcggctttaaag
aacgccttctccctcctgggcaaacagcgctttgagcagtcagctgcatttttcctgctc
gctggctccctgaaagacgccattgaggtttgtctggagaaaatggaggacatccagctt
gcgatgattgttgctcgtcttcacgaggctgattatgagagttcctccacatgtcagggt
atcctgtatgagaaggttctcggctgcaacagagatggaagtggcttttcctgtaccaaa
ctgcaccctgacccattcctgaggagcattgcgtactggatcatgaaggactacaccaga
gccctggacacactgctggagcagatttacaaagaggatgatcagaaccctgatgttctg
gtgaaatcttgcaatcctgtcgtctttagtttctataactacttgcgcgcacaccctctg
attattagacggcattttgccaagcccgaagcatctggggttgcagttggtataacatca
gaacgcaactgcgcagacgaaataaacctgatagagcggaaactcttcttcaccaccgct
aatgctcactttaaggtgggctgcccacttctggcccttgaggtcttatccaaaatccct
aaagtcactaagaaagcatcttctctgagtaagggctcatctgtggccaatgtcagtgcc
ccccagccgcaggagaatggaggaaaggcttcagatttcgcctggggaacagagtcctct
gccgggttggactggagtcaaccaatggttaaaatggaggatgagggtctacagttggat
tggggttatgataaagaagaagatgaggacgaagagggtgggctgaccatgaagaaacca
gaggtggaggatgaggatgccaaaaagccatccaaatcagcagctgtgcagcgtgaagac
tcaaagggtgagtcagaggtggatgtgatcgccgaacagctgaagttccgagcctgtttg
aagatcctcatgacggagctgcggacgctggcaacaggatatgaggtggatggtggcaaa
ctgcgatttcagctaaactggctggagaaggaaatcgaggccatgcactacatctgcaat
tataagtttgaggggaaagctgccgcaggtcagctggagaaatggggagatgatgcatct
ctggacctggaagactcacagatccgtggtgaagcaggtgcatacgaacgtcatcagatg
gagcgacggcgtctgcaggccaagcagctacatgcagagcgaaggaaatcctggctgaga
gagaatcaggctctgctcagagtcttcctcagttactgcagtctacacggagccaagggt
ggaggagtgacttctgtcagaatggagctactctttctgctgcaggaatcacaacaagaa
atgacagtgaagcagcttcaatcaccactccccctccccactactctgccactgctgtcg
gccagcatcgcccccaccaagactgtcatcgccaaccctgtcctgcatctcagaaaccac
atacatgatatcctctacaccattgtccagatggaggctccacctcacccagacgttctg
gacgaccgggtgaatgctttacacacactcgctgcttctctatcagcgtgtatctaccaa
tcgctgtgtgacagccacagctacagtagtcagtcggagaccaatcagttcacagggatg
gtctatcaggggctgttactgagcgacaggcgtagacttcgcactgagagcattgaggaa
catgcaacgcccacctctgcccctgcacagtggccaggtgtgtcgtctctgatcagtctg
ctggcgtgtgctcagggtgatgatcaaattcgtctgaacgtcatgttgtgtgaggcagtg
gtggctgtgtatctaagtctgctgattcacggtcttggcacacattctggaaatgagctc
ttccggctggctgctcatccactcaacaaccgcatgtgggcagccgtgtttgggggtgga
gccaaacttattgtcagacccaagcggccacctgaaatcactccagcagtacctcctcca
gcccctcctgctgaggacgtggaccgacagcgacgcaggtttaacatgcgcatgcttgtt
cctggacgtcccgttaaagagactccagccacacctccgcccatccctgtagagcggccc
acctataaggagaaattcattccacctgagctcagcatgtgggattactttgtggccaaa
cctttccttcctctctctgacagcggggcactgtatgattcagatgagagtggtggtagt
gacaatgaggatgatgatgatgatgccttcctctcagacacacagatgacagaacactct
gatccaaactcctacagttggtctctgatccgccttgtgatggtcaaacttgccctgcac
aatgtcaagacattcctgcccctgacaggactggacttcacagagttgccagtgacatct
cccctggccaatgctatgctcaagacactggaaaactgggaacagattctcctggaaaaa
atgaacaaatttgacagccctccaccaaactacatcaacaccttccccacggacctgagt
gctggcgggggaccggctatactcagacacaaagccatgctagaaccagataacacaccg
ttcaagtcaaagcaccgcctctccttccctgctcgccgtctgtggcattttctagtcaag
caggaggttctccaggagactttaattcgatacatcttcacaaagaaaaggaagcagagt
gagtctttagatgatcatgtggaccacctcatacaaaactacgttactggagctcgaaaa
accaacaaggtggaggctgatatgggttacccgggaggcaaagccaaaattatccataaa
gaatctgacatcatcatggcgtttgccattaacaaggctaacactaatgaattagtgctg
gcgtctactcatgatgtccaggaagtggacgtgtcctcactgctcgcagctcagccttac
acctggatcggagaggactttgacaaggagtctcgcagctctgatgatgtggattatcgc
tcatctcacaccaacatcgcccaggccagtgccagtccctttgccccccaacaaatggca
gcatcatcctccatgccatggctgggcagcggacagaccagcatgggtgccagtgtgatc
atgaagaggaacctgaataacgtgaagagaatgacatctcatcccatctatcagtactat
atgacgggtgctcaggacggcagtgtgaggatgtttgagtggaatcgtccacagcagctc
atttgtttcagacaggctggaaacgctcgagtcacacgcctctatttcaactcacagggc
aacaagtgtggtgttgcagatggtgagggctttttgagcctctggcaagtcaatcagacc
tcctcaaaccccaaaccttatttgagctggcaatgtcacagtaaaagctgcagtgatttc
gccttcattacgtcctccagtctgattgccacagcaggacagtccaacgatggcaggaat
gtttgtttatgggacactctgatctctccaagtaactctatgatacacgcattccagtgc
catgagaacggcgcaacggttcttcaatatgctcctaaacagcagctcatcatcacgggc
ggacggaagggattcgtctgtatttttgacatccgtcagagacagttgctccacacattc
caggcacatgattcaaccatcaaagcaatggccatggactccactgaagacttctttgtc
accggctcagctgaagggaacatgaaggtctggaagttggcgggtcacggtctcatgcac
tccttcagcaccgagcacgctaaacagtccatattccgaaacatcggcgccggcgtgatg
aaaattgaaacctgcccaggcaaccggatcttcacctgcggagccgacgggaccctgaaa
atgagggtccttcccgaccgctgcaacattccggccagtatattccagatcctctaa
DBGET
integrated database retrieval system
