Cyprinus carpio (common carp): 109110922
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Entry
109110922 CDS
T05134
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2-like isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109110922
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
109110922
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
TAP_C
Motif
Other DBs
NCBI-GeneID:
109110922
NCBI-ProteinID:
XP_018979418
Ensembl:
ENSCCRG00000049159
UniProt:
A0A9Q9VK91
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Position
A19:complement(17916682..17919944)
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AA seq
389 aa
AA seq
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MSNTVMSGNHTDQQMSALEETRTILCDQFASISGSDSAVAQCYLAENEWDMERALNSFFE
AHMDSVFDVEEAEETKAVSGNKRKEVNSSDPADASGTKKKFKTDQVDCIDLTAEEPTCSS
SVNPQESQAESAVTESNAEDSKLSVISWNVDGLDTLSLAERARGLCSYLALYTPDVVFLQ
ELIPSYIQYLKKRAVSYLFVEGSDDGYFTGIMLKKSRVKLLESEIICYPTTQMLRNLLVA
QVTFSGRKLYLMTSHLESCKNQSEERMKQLRVVFQRMRGAPEDATVIFAGDTNLRDTEVV
KVGGLPPGVCDVWEQLGKQEHCRYTWDTKANSNKTVPYICRCRFDRIFLRSAETGPRVTP
DHMVLVGMEKLDCGRYTSDHWGIYCTFNT
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacactgttatgtcgggtaatcacaccgatcaacaaatgtctgctctagaggaa
acgaggaccatcctttgcgatcagtttgcctctatctctggatcggacagtgctgtggcg
cagtgttatctagcagaaaatgaatgggatatggagagagcactgaactcgttcttcgag
gctcatatggattcagtctttgatgttgaagaagcagaggagactaaagctgtttctggg
aataagagaaaggaggtcaattcctcagaccctgctgatgcttcaggaacaaagaagaaa
tttaagacagaccaggtggactgcattgacctgacagcggaggaacccacctgctccagc
agtgtgaaccctcaagaaagtcaggctgaaagtgctgtaaccgaatctaacgcggaggac
agcaagctctccgtcatcagctggaatgtggacggtttggacacattgagtcttgcagag
cgtgccaggggcttgtgttcgtatctagctctatatacaccagatgtggtttttcttcaa
gaacttattccatcttatattcagtatcttaagaaacgtgctgtcagctatctgtttgtt
gaaggaagcgatgacggatacttcacaggaataatgttgaagaaatcaagagtaaaactt
ctggaaagtgagatcatctgttatcctacgacacagatgttgagaaatctattagttgct
caggtgactttctcaggtcggaagctatacttgatgacatcacatttagaaagctgtaag
aaccaatcagaggagagaatgaaacaactgcgcgttgtatttcaaaggatgcggggagca
ccagaagatgctactgtaatttttgctggggacaccaatctcagagacaccgaggtggta
aaggtgggaggtttgcctccaggtgtgtgtgatgtgtgggaacagctgggcaaacaggaa
cactgccggtacacctgggacaccaaagcaaacagcaataagactgtgccttacatctgc
agatgtcgcttcgaccgcatcttcctgaggtctgctgaaaccggcccaagagtcactccg
gaccacatggtcttggtgggaatggagaaactggactgtggccgttacaccagtgatcac
tggggaatttactgcactttcaacacatga
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