KEGG   Cyprinus carpio (common carp): 109110967
Entry
109110967         CDS       T05134                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109110967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109110967
Spliceosome [BR:ccar03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    109110967
 Complex C
   U5 SnRNP specific factors
    109110967
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st EIF3I WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML NBCH_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N eIF2A Cytochrom_D1 Beta-prop_IFT140_2nd WD40_like Beta-prop_Nup120_160 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 109110967
NCBI-ProteinID: XP_042600653
Ensembl: ENSCCRG00000050273
UniProt: A0A8C2BI19
LinkDB
Position
B19:15473634..15478793
AA seq 347 aa
MIEPKKRGAEMAVVPAGVKRPRTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVY
CCKFHPNGATLASSGYDRLILLWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTD
KTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTF
QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSVDGSYL
LSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVY
IWDTTSRRILYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEIQ
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgatcgaaccgaagaagcgtggcgcggagatggcagtcgttcccgccggagtgaagagg
ccccggacagagctggtggccgcagcgcagtcccagcagctctctgctatgggccccccg
cgcagctccagtctgcaggctcctataatgctgctctctggtcacgaaggtgaagtttac
tgctgcaaatttcaccccaatggagccacgttagcctcctctggatacgaccgtctcatc
ttgctgtggaatgtttatggagactgtgagaactatgcaacacttaaaggccacagtgga
gctgtgatggagcttcattataacacagatggaagtctgctcttttcagccagtacggac
aagacggtgtgtgtgtgggacagtgagaccggggagcgtgtgaagcgtctgaaaggtcac
acgtccttcgtgaactcatgttttccagctcggcgtggaccacagctggcctgtacgggc
agtgatgatggaactgtgaagctgtgggacattaggaagaaggcctctgttcacacattc
cagaacacgtatcaggttcttagtgtgactttcaatgacaccagtgaccagatcatctca
ggaggcatcgacaacgacataaaggtatgggacctcagacagaacaagctgatttacagt
atgcagggtcatggagactctgtgacaggtctgagtctcagtgtagacggctcctacctg
ctgtctaactcaatggataacagtgtgcgtgtctgggatatccgtccatttgcaccaaag
gagaggtgtgtgaagatctttcagggaaatgtccataactttgagaagaatcttctcaga
tgctcttggtctcctgatgggagtaagattgcagctggttctgctgacaggtttgtgtat
atttgggacacaacatcccgtaggatcctttataagctcccaggtcatgctgggtctgta
aatgaggtcgctttccatccagaagaaccaattgttctctctggatccagtgataaacgc
ctctacatcggagagattcaataa

DBGET integrated database retrieval system