Cyprinus carpio (common carp): 109110978
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Entry
109110978 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109110978
04091 Lectins [BR:
ccar04091
]
109110978
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109110978
Lectins [BR:
ccar04091
]
C-Type lectins
Others
109110978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
SUEL_Lectin
Ion_trans
REJ
GPS
MpPF26
Motif
Other DBs
NCBI-GeneID:
109110978
NCBI-ProteinID:
XP_042610345
UniProt:
A0A9R0AU44
LinkDB
All DBs
Position
Unknown
AA seq
2490 aa
AA seq
DB search
MDNQTLYILFLIVSXFHVISIWSDDEEFLSCPEHQQAFESSCYEFVALQRSFLSAQAWCE
RGGGHLSFIQNDETQQFLQKHLQPKQDWWIGLAPASTNLTLDSAATEGLLSWLDGSDVSY
SNWLQEPLLNASCGYIRRDSGFQWETASNCSQELYFICEFESGRSLACADHNATLQCGSG
QVIEIDDSFYGRKTVHYCRSSHARSHASPQQEECSWVDIVDTVSEHCHGLQVCQAGADIS
SFGEPCPVLGSYLSVEYHCKNALHLLMSKLAAVFDNIPITVKWLLHHPFQGNLTCTLXGD
GHIIDNYSPEEGVMENVVHKYSHAGVYTAMVECSTSEWHVTASKSITIQEPLGQFGTLKC
HSMNKSTDYSNCKALYNNPLRIQLELDAGTNVTYKIQHENTELASVSAIRGIVPHNITIS
PEVQQQLGPGCQQLTVVALNGVTAVDRSTVLQLCLVEPVEGLIVDIEFEHEQCPVHALYV
NVSLARGAPVQLHFLVSGANXTFSEMHEMLHGNPQVFVISNTILRANLNVVVRAENSFSS
MEMDGCNTTVYCHNETVNKHEEDTISEHVRTARANNLNITLDPEVPVIGTTSVKLYVDGE
VDDDAIWKCHEDCPCSSGVKNRDHEISEACLPPVYGFSVYTVHTKSHGVTQIDGDGXMSV
IPRENMKLSVTCSNCSPVNVAESVKLQVQCEGCQKIVWYFESTKDFTGSLSRCHSESVKK
PLIQKAEGSSLTIESDALRKAKQDITVVVYAIKDSLSGSARYTVPVVDTSSTEDSSVQPL
LSTTVSPSSPTTDKFVAPPVALSPPSCVISPLVGDVLSPFKISCSVDPSFCKAGSCIFCF
KTARGKYFYCGAEPTVESLYLPLGNKHNNYSLTVDITVKNTAGVTADTAVTTRVKDISSN
HTVGDLHVLVSSQVSQLQQQGRLTGAALAQMFQSVSDKLNDALPEGQHDSVKKELREEML
QSLSAATSSFPPKNPAEVQMSANVVSGLTTQGHELTDTAQLQASYLLTNLSKSLVSLTLS
GKEFSEKILQASTPIIDAASNIIKVSSRTSKQNEISSHLLKTVDNVQSALLAGKKVNQEP
IILSSSVFGLYVNRISSADLQKQPFNIKKNSSASFILPSLGSNVLSPDEPVDVRMTSFRI
NPFSRHEGVHISGSVGSLSLTKMNGSVITVANLTEEIEILLPRKEVAEVNRTLLELANFS
TVVINVTAPNISLVFKLDPSEETPLQLLLGFQDYPNDTNYEARIQLPQDGDSEEERNTWV
LNPTEMTIEVGVYYLLVRPVVGAGVNSTNTSVFITTIAAHCLYWDETKANWSGDGCRVGP
RTTTLVTQCLCSHLTFFGSSFFVMPNVVDVSRTAELFATFVNNPVVVCFVGAIILAYLLV
VMWARRKDIQDAVKVKVTVLEDNDPLAEYRYLLSINTGHRRGASTSSQVTVTLQGTEGES
EPHHFTDPEKPLFERGGLDMFLLTTPFSLGELQSIRLWHDNSGQHPAWYVNKVMVQDLET
GQKCHFLCNSWLSVDLGECTLDKVFPVATEMDLKRFSNLFFMKTAKDFRDGHIWFSVISR
PPSSNFTRVQRVSCCFSLLLCTMLTSIMFWGIPSDPSEQTMDMGQIEFTWQQVMIGIQSS
IIMFPINLLIVSIFRNARPREQKSESSSKQQSKIDPKKQGKMGRVSPNQPPHNNHKEITP
DTVIKDIKRIAQSLYKVMRRPVPRTELDSTKTDINNLLSLVEEIIRQHNRVGSEFYTDSY
KKKQTLTASLECVNLKESSFCESSERNEKHSVYSQYLYKQLQNVERELRLLGPSSFSKPN
SYNQAVLQVQGMKNLLEPHVSSCSVSGLHTRSSSPTEGNSGDSRKCSQKGLPWWFVFVGW
FLVVATSGVSAYFTMIYGLTYGKDRSISWLISMVVSFFESLFITQPVKVLGFAVFFALVL
KTVDQEDYGDVPIDGTLPNTDDPDAIRIARRDSTCSFYQPPPPTDIEKMRNNMIKEQKVF
ALIREILIYVGFLWMLLLVAYGHRDPHAYYFTRHIRQSFSNGISESMNHKDILNWAKSSL
LSNLFGQYPGFITDGNSKLVGNARFRQVRVRKDSCKIAKTMQYTVPDCHAPYSWEAEDMG
SYGPGWNRTKNVNGSKIVTNPWRYQTQAKLRANPVWGGLALYKGGGFVVELGPDQKNASS
LLQYLFDNIWLDVYTRAVFVEFTVYNANVNLFCIVTLIFETTGVGVYQYRSEVQTVHLYQ
STGGFHIFVMASEAIYFLFILYYMFVQGKLMKQQKWAYFKSKWNLLELAIIILSWSALSV
FVKRTILGNRDIEYYQNNKDMFASFYETATADAVLGYLIAFLVLLATIKLWHLLRLNPKL
HMITSTLQRAWTDISGFIVVMTIMFLAYSIACNLMYGWRLYSYRTLLEAAQTIICLQLGI
FNYDEVLDYDPVLGAFLIGSCIIFMTFVVLNLFISVILVAFNEEQLHPTPSEEEEIVDLM
LMKICSLLGIKCKKKQIDADASVTTASVIS
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcaaactctctacattctgtttctaatagtgagttgatttcatgtcatctca
atctggagtgatgatgaggagtttctttcctgtccagagcaccagcaggcatttgagagc
tcctgctatgagtttgtggctctgcagcgcagtttcctcagtgctcaagcttggtgtgag
cgtggcggtgggcatctatccttcatccagaatgatgaaacccaacagtttctccaaaaa
cacctgcagccgaagcaggactggtggataggactcgctcctgcctccaccaacctcact
ctggactctgctgctactgaaggtcttttgtcctggttggatggttcagatgttagttac
tccaactggctccaggagcccttgctgaatgcatcctgtggctacataaggagagattct
ggatttcagtgggaaactgccagtaactgtagccaggagctctacttcatctgcgagttt
gagtccgggcgctctttagcctgcgctgatcataatgctacgcttcagtgtggctctggt
caagtgatagagattgatgacagcttctacggcaggaagacggtgcattactgcaggagc
agccacgctcgctcacatgcatctccacagcaggaggagtgcagctgggtggatatagta
gatactgtatcagagcactgccacggactgcaggtgtgtcaggctggtgcagatatttca
tcttttggagagccgtgccctgtgctaggaagctatttgtcagtggaatatcattgcaaa
aatgctcttcatctgctaatgagtaagctggctgctgtctttgacaacattcccatcaca
gtgaaatggttgctgcaccatccatttcaaggcaacctcacgtgcacactgnngggggat
ggacacatcattgataattacagtcctgaagagggagtgatggagaatgtggtgcataag
tacagccatgctggagtatacactgccatggtagagtgcagtactagtgaatggcatgtc
accgcttccaaaagcatcactatccaggaaccgctcggacagtttgggaccttaaagtgc
cacagcatgaataaatcaacagactattccaactgcaaagcactttataataaccctctg
agaatccaattggaattagacgcaggaacaaatgtcacatacaaaattcagcatgaaaat
acagagctggcctccgtttccgctatcagagggatcgttccccataatatcaccatatct
ccagaagtacagcagcagctaggaccaggctgccaacagcttactgttgtggctctcaat
ggggtgacagctgtagatcgctccactgtcctgcagctgtgcttggtggagccagtggaa
ggactcatagtggacattgaatttgagcatgagcagtgtccggtccatgccctctatgtc
aatgtgtctctggctcggggagctccagtgcaactccattttctggtgtctggagccaat
nncactttttctgagatgcatgagatgcttcatggaaatccacaagttttcgtaatctca
aacacaatacttagggcaaatttaaatgttgtggtcagagcagagaattccttctcaagc
atggaaatggatggttgcaacacaacagtgtattgtcacaatgaaacagtgaacaaacat
gaagaagacacgatcagtgagcatgtgagaactgccagagccaataatctaaatatcaca
ttagatccagaggtcccagtcatcggcactaccagcgtcaagttatatgttgatggagaa
gtagatgatgacgctatctggaaatgccatgaggattgcccctgttccagtggagttaaa
aatagagatcatgagatatccgaagcttgcctaccaccagtgtacggtttctctgtgtat
actgtacataccaagtcacatggggtcacacagattgatggagatggatgaatgtctgtc
attcctagagaaaatatgaagctttctgttacctgttccaactgcagtccagtgaacgtc
gctgagagtgttaagctacaggtgcagtgtgaaggatgtcagaaaattgtttggtacttt
gagagcaccaaggattttactggttcactgagccgctgtcactcagagtcagtgaaaaag
ccattgatacagaaggcagagggcagctctttaacaatagagagcgatgcactacgaaaa
gcaaagcaggatatcacagtggtggtttatgctatcaaggatagcttgtctggatctgct
agatacactgttccagttgttgatacatccagtactgaggattcatcagtccagccgctt
ttgtcgactactgtctcgccatcatctcctactactgacaaatttgtagcgccccctgtc
gccttgagtcctccctcctgcgtcattagtcctcttgtgggtgatgttctctctcctttt
aagatcagctgctctgttgatccatctttttgcaaagctgggtcctgtattttctgcttc
aaaactgccaggggtaaatatttttattgtggtgccgagcccacagtggagtcgctttac
ctccctctagggaataaacataacaactacagtctgacggtggacatcactgttaagaac
acagcaggtgttactgctgacactgctgtaaccactcgggtaaaggacatcagtagtaat
cacacagttggagatctccacgtgctggtttccagccaggtgtctcagctgcagcaacaa
ggtcgactcactggggcggcgctggcacagatgttccagtctgtgtccgacaaactgaat
gatgcattaccggaaggacagcatgacagtgtcaaaaaagagctgagggaagagatgttg
cagagtttgagtgctgccacgagttccttccccccaaagaatccagcagaggtgcagatg
agtgctaatgtggtttcaggccttaccacacagggtcatgagctgacagacactgctcag
ttacaggctagttatctgctaacaaacctcagtaagtccttggtctccttgacactttct
ggcaaggagttctctgaaaaaatactgcaagcatccacgccgattattgatgctgccagt
aacatcatcaaagtttcttccagaacttctaagcagaatgagatctccagtcatttacta
aaaactgtggacaatgttcagagtgccttgttggctgggaaaaaggtgaaccaggagccc
atcatactcagctcttcagtttttggtttatatgtcaacagaatatcatcggctgatctt
cagaaacagccctttaacattaagaagaacagctctgccagttttatcctcccatctctg
ggctctaatgttctgtctccagatgaaccagtagatgtacggatgacaagtttcaggata
aatccattttcacggcatgagggcgtgcatatcagtggatcagtggggtctctatctctc
accaaaatgaatggctctgtgattacagtggcaaacctgactgaggagattgagattctc
ttaccaaggaaagaggtggcagaggttaaccgaactcttctggaactggcaaacttcagc
actgtggtcattaatgtgactgcacccaatatatctctggttttcaagttagacccttca
gaggagacacctctgcagttgctcctgggttttcaggactaccctaacgatacaaattat
gaagctcggatccagctacctcaagatggcgactctgaagaggagaggaacacttgggtg
cttaaccccacagaaatgacaatagaagtaggggtttactaccttctggtgaggcctgtt
gttggtgcaggggtgaattcgacaaacacctcagttttcatcacaaccattgctgctcac
tgtttgtattgggatgagacaaaggccaattggagtggcgatggctgtagggttggccct
cgtactacaacattggttactcaatgcctatgttcccatttgaccttttttggaagctct
ttcttcgtcatgcccaatgtggttgatgtgtcccgcactgctgaactctttgcaaccttc
gtcaacaacccagtggtggtgtgttttgtaggcgccatcatcctggcttacctgttggtt
gtgatgtgggcacgaagaaaggatattcaggatgcagtcaaggttaaggtcacagtactg
gaggacaatgatcccttagctgaatatcgttacttgttgagtattaacacagggcatcgt
cgtggggcctccacctcttctcaggtgacagtgactctacagggcacagaaggagagagt
gaacctcaccattttactgaccctgaaaaaccattgtttgaaaggggaggactggatatg
ttcttgctgaccacccccttctcactgggagagctacaaagtattaggctgtggcatgac
aattcaggacagcatcctgcttggtatgttaacaaggtaatggtacaggacctggagacg
gggcagaagtgtcacttcctgtgcaactcatggttgtccgttgacttgggagaatgtaca
ctagataaagttttccctgtagcaacagagatggacttgaaaaggtttagtaatttgttc
ttcatgaagactgcaaaagatttccgtgatggtcacatctggttctctgtaatcagtcgt
cccccaagtagtaattttactagagtacagcgtgtctcctgctgtttttcactgctgctc
tgcaccatgttgaccagtatcatgttctggggtatcccatcagacccctcagagcagacc
atggacatgggtcagattgagttcacctggcaacaggtcatgattggcatccagagttcc
attatcatgtttcctatcaatctcctcattgtgagcatcttcagaaatgctcgtccaaga
gaacaaaagtctgaatcatcttcaaagcaacagtcaaagatagaccccaaaaagcaaggc
aaaatgggacgcgtgtctccaaatcagcctccacacaataatcacaaggaaatcacacct
gacactgtgataaaggacatcaaacggatagcacagtcactctataaggtcatgagaaga
cctgttccaagaacagaactggactccaccaaaacagacatcaacaatctgctgtcacta
gtagaagagataattcgtcaacacaatcgagttggaagtgagttttacactgactcttat
aaaaagaagcaaactctcacagcttccctggagtgtgtaaatctgaaagagagcagtttt
tgtgagagctcagagcgaaatgaaaaacacagtgtctacagccagtatctctacaaacag
ctgcaaaatgtggagagagagctgagactgctggggccttcatccttctccaagccaaac
agctacaaccaggcagtattgcaggttcaaggcatgaagaacctacttgaacctcatgtc
tcctcctgttctgtcagtggcctacatacccgtagctccagccctacagagggaaacagt
ggagacagcagaaagtgtagtcagaaaggcttgccctggtggtttgtgttcgttggttgg
tttcttgttgtagccaccagtggtgtttcagcatacttcactatgatatatggattgacc
tatggaaaggaccgttccatcagctggctcatttcaatggtggtgtcattcttcgaaagc
ctcttcatcacccagcctgtaaaagtactgggctttgcagtcttctttgctttggtactc
aaaactgttgatcaagaagattatggagatgttccaattgatgggactctacccaacacg
gatgatcccgatgcaatcagaattgccaggagagacagcacatgtagtttctatcagcct
cctcctcccactgacatagaaaagatgagaaacaacatgatcaaggagcagaaagtgttt
gcactcatcagggagattctcatttatgtgggattcctttggatgcttctcttggttgca
tatggtcatcgagatccacatgcatactacttcactcggcatatccggcagagtttcagc
aatggcatttcagagagtatgaaccacaaagatatattaaattgggcaaaatcctccttg
ctcagtaatctgtttgggcaatatccaggcttcataacagatggaaattcaaaacttgtt
ggcaacgctcgattccgccaggttagggtaaggaaagactcttgtaaaattgccaagacc
atgcagtacactgttcctgactgccatgccccatactcctgggaagcggaggacatgggc
tcttacggtccagggtggaaccggactaaaaatgtgaacggttctaagattgtaaccaac
ccttggcgctaccaaactcaggccaaactccgggcaaaccctgtttggggtgggctggcc
ctttataagggtggaggatttgtggtggaactaggcccggatcaaaagaatgcaagcagt
cttcttcagtatctttttgacaacatctggctggacgtgtatacacgggctgtctttgtg
gagttcacagtttataatgcaaatgtgaacctcttctgcattgtgactctcatttttgag
accacgggagtgggtgtataccagtaccgtagtgaggtgcagactgtccatctttatcag
tccactggtggctttcacatatttgttatggcatcagaggccatctatttcctcttcatt
ctctactacatgtttgtgcagggcaaactgatgaagcagcagaaatgggcatacttcaaa
agcaaatggaatctcttagagttggccattattattctaagttggagtgcattatctgtg
tttgtcaagaggacaatattgggtaaccgagacattgagtactaccaaaacaacaaagac
atgtttgccagtttttatgagactgccactgcagatgctgtactgggctatctgatagct
ttcttagtcctgctggccaccataaagctgtggcatctgctgagactcaaccccaagcta
cacatgatcacctctacactgcagcgggcatggacagatatctctggcttcattgtggtc
atgaccatcatgtttctggcctattccattgcttgcaatttgatgtacggttggaggctc
tactcatacagaactttgcttgaggctgcacagaccattatttgtctacagctgggtatc
tttaactatgatgaggttttggattacgatccagtcctgggagctttcctgattggatcc
tgcattatctttatgacattcgtagttctcaacctctttatatctgtgattttggtggct
ttcaatgaagagcaacttcatcccactccttctgaagaagaggagattgttgacctgatg
ctgatgaagatctgcagtcttcttggcatcaagtgtaaaaaaaagcaaattgatgcagat
gcttcagtgactacagcttctgtcatatcatag
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integrated database retrieval system
