Cyprinus carpio (common carp): 109111010
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Entry
109111010 CDS
T05134
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109111010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109111010
Spliceosome [BR:
ccar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
109111010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
109111010
NCBI-ProteinID:
XP_042613074
UniProt:
A0A9R0AVQ6
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Position
A5:complement(37164691..37174112)
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AA seq
498 aa
AA seq
DB search
MIAGVKRERDVDEDEEEEVRVKVGRSHGVEDRRSRHCPYLDTINRSVLDFDFEKLCSISL
SHINVYACLICGKYFQGRGQKSHAYIHSVQFAHHVFLNLHTLKFYCLPDNYEIIDSSLDY
ITYVLKPTFTKQHIAGLDKHGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPP
LRNYFLEEENYRRIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSK
KTFQITKQGDAVDFLSWFLNALHGALGGTKKKSSILTKVFQGSMRIFSKKLPHPDLPPEE
KEALLLKDEYQEEMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNNEKE
YKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQ
VTEKITTYDLVANIVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVIDILPQMITLSEAYI
QIWKRQDKDDGAENHTGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaggcgtgaaacgggagagggacgttgatgaagacgaagaggaagaggtgcgc
gtgaaagtgggtcgttctcatggtgtggaagacagaagaagccgccactgtccgtatctg
gacacaatcaacaggagtgttttggattttgactttgagaagctttgttcaatctcgctc
tctcatattaacgtctacgcctgtctgatctgtgggaagtatttccaaggtcgaggtcag
aagtctcacgcgtacatccacagcgttcagttcgcgcaccatgttttcctgaatctccac
actttaaagttttactgcctgccggacaattatgagatcatcgactcctcgttagattac
atcacgtatgtgctgaagcccacgttcaccaaacagcatatcgctggtttggataagcat
gggaagctgtacagagcctacgatggcacgacctatcttccaggaattgtgggtctgaat
aatatcaaggccaatgactacgctaatgtggttttgcaggctttgtcaaacgtgccgcct
ctgcggaactacttcctcgaggaggagaactatcgcagaatccgccggccgccgggtgac
atcatgtttctgttggtgcagcgcttcggcgagctcatgcgcaagctctggaacccgcgt
aacttcaaagcccacgtgtcgccgcatgaaatgttgcaggccgtggtgttgtgcagcaaa
aagacctttcagatcactaaacaaggggacgctgttgactttctgtcctggttcctgaat
gcactgcacggtgctcttggtgggacaaagaagaaatcatccatcctcaccaaggtgttt
caggggtccatgcggatcttctcaaagaagcttcctcatccagatttgcctccagaagag
aaagaagcccttctccttaaggacgagtaccaggaggagatgtccgagtccaccttcctg
tacctgacgctggatctgcccaccgcacccctctacaaagatgagaaggagcagctcatc
attcctcaggtccctctcttcaacatcctggccaagttcaacggaaacaacgagaaggag
tacaagacgtacaaagagaactttctgaaaaggttccagctcaccaaacttcctccgtac
ctcatcttctgcatcaagcgattcaccaagaacaacttctttgtggagaagaacccgacc
attgtcaacttccccatcacgaacgttgatttgcgcgagtacctgacagaagaggcgcag
gttacagagaagatcaccacctacgacctggtggccaatatagttcacgatggaaagccc
actgagggatcctacagaatccatgttctgcatcacggcacagggaagtggtacgagctt
caagacctgcaggtgattgatatccttccacagatgatcacgctctcagaggcttacata
cagatttggaagagacaagataaagacgatggagcagaaaaccatactggggcgtag
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