KEGG   Cyprinus carpio (common carp): 109111115
Entry
109111115         CDS       T05134                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109111115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccar04131]
    109111115
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109111115
Membrane trafficking [BR:ccar04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    109111115
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109111115
  Exosomal proteins of other body fluids (saliva and urine)
   109111115
  Exosomal proteins of colorectal cancer cells
   109111115
  Exosomal proteins of bladder cancer cells
   109111115
SSDB
Motif
Pfam: VPS28 DGT4
Other DBs
NCBI-GeneID: 109111115
NCBI-ProteinID: XP_042601359
Ensembl: ENSCCRG00000037692
LinkDB
Position
B19
AA seq 223 aa
MFHGIPASGVMGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTGACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPTDSEAKDK
VSLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtttcatggaatacctgcctctggagtgatgggaggagcgcctgccaacaagccagaa
ctgtatgaggaagtgaaattgtacaaaaatgccagagaaagagaaaagtatgacaacatg
gcagagttgtttgctgtggtcaaaacacttcaggccctggaaaaagcctacattaaggac
tgtgtgactccaaacgaatacacaggagcttgctcaagattgcttgtccagtacaaggct
gctttcaaacaagtccagggatcagatgtgggctccattgatgacttttgtcggaaatat
aggctggactgtccactggctatggaaaggatcaaagaggatcgaccaatcaccattaag
gatgacaagggcaacttgaatcgctgcattgcagacatagtttctctctttatcacagtg
atggacaaacttcgacttgagattcgtgccatggatgagatccagcctgacctgagagag
ctcatggagaccatgaatagaatgagcaacatgccaacagattcagaggccaaagacaaa
gtcagcctctggttaaccacactaagcagcatgtctgcatcggatgagctggatgactcc
caggttcgccagatgctgtttgacctggagtctgcctacaatgcctttaatcgtttctta
cactcctcttaa

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