Cyprinus carpio (common carp): 109111230
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Entry
109111230 CDS
T05134
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03320
PPAR signaling pathway
ccar04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
109111230
03320 PPAR signaling pathway
109111230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109111230
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccar03310
]
109111230
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
109111230
Nuclear receptors [BR:
ccar03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
109111230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
C1_2
Motif
Other DBs
NCBI-GeneID:
109111230
NCBI-ProteinID:
XP_042611623
UniProt:
A0A8C1MXY3
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPPSGQRSPPLAPSAAAMTSLPPITSAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQMNMFARNTEINSTVSMSGLHAVSSSDDVKPPFGLKPMS
AHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDK
RQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKEREGEVESTSAANEEMPVEK
ILEAEMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDD
QVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEV
GAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEA
YCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcagagattctcgtagtccagacagctcatccgtttcctcaccaccatca
ggtcagcgttcgcccccattggccccttcagccgccgccatgacttccctgccacccatc
acttcggccgtgaacagtcccatcagcagcatgggctcacccttctccgtcatcagctcc
tctctgggttctccttgccttcctggaactccctcagtaggctacggccccatcagcagc
ccacagatgaacatgtttgccagaaacacagagatcaactccaccgtgtccatgtcggga
ctgcatgcagtcagcagctctgatgacgtcaaaccacccttcggtttgaagccgatgtcc
gcccacagcccagggcccatggtctctcagaaacgcttgtgtgccatctgtggggaccgc
tcctctggcaagcactacggcgtgtacagctgcgagggctgcaagggctttttcaagcgc
actgtgaggaaggacttgagctacacatgcagagacaataaagactgtctggtggacaaa
cgccagaggaaccgctgccagtactgccgctaccagaagtgcctggccatggggatgaag
agagaggtggtccaagatgaacgacaacgatccgttcaagaggagcgtcagaggaacaag
gagcgtgaaggagaggtggagtccaccagcgccgcgaacgaagagatgcctgtagagaag
attctagaagcagagatggccgtggagcagaagaccgagctgcatgcggatggcagctca
gggggaagctctccaaatgacccagtcacaaatatctgccaggcggctgataaacagctg
ttcactttggtggagtgggcaaaacggatccctcacttcagtgagctgtctctggatgac
caggtcatcctgctgcgtgctggctggaatgagctactgatcgcgtctttctctcatcgc
tccatcgcggtgaaggatggcattctgctggccaccggcctccacgtgcacagaaacagt
gctcacagcgcaggggtgggagccatctttgacagggagagtgcgcacaatgcagaggtt
ggggccatattcgacagggtgctgacggagctggtgagcaagatgagggacatgcagatg
gataaaaccgagttgggctgcctgagagccatcatcctcttcaacccagatgcaaagggc
ttgtcaagcccaagtgaagtggagttactgagagagaaggtctatgcatcgctggaggct
tattgtaaacagagatatcctgaccagcagggcaggtttgccaagctcctcctccggctg
ccagcgctgcgctctattggcctaaagtgccttgagcacctgttcttcttcaagctgatt
ggagacaccccaatcgacaccttcttaatggaaatgcttgaagcgccacatcagctgacc
taa
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