Cyprinus carpio (common carp): 109111245
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Entry
109111245 CDS
T05134
Name
(RefSeq) rho guanine nucleotide exchange factor 2-like isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109111245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109111245
Membrane trafficking [BR:
ccar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109111245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
C1_2
Prok-RING_1
PHDvar_NSD
PHD
Anticodon_2
Motif
Other DBs
NCBI-GeneID:
109111245
NCBI-ProteinID:
XP_042601579
UniProt:
A0A9Q9XGU8
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All DBs
Position
B19:19940874..19985975
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AA seq
1169 aa
AA seq
DB search
MGPEELPHFMDTMSSTPPLSPRPVGSSFSPPYCSPPVVTLRPPATRHLTQLDPWRRHSWE
PGAVAQGYPPNDTRSVSLEDLDLDEISLVINGALRSKRAREARRSVTQASLTSLTEEEVG
AEHQEHHQSALEEQSNQMHGCSASAPSLYMMQQMPRSSAPRPRSYCHESVSYHQIGGSSH
SIDSEFASPGWDIDGGQIKAEGHKNKEDASGNRLERTLSFLRKMTAKSKNKEKERMRERE
REARDREARYSNGHLFNSLTVSGTTLCSACNKSITAKEALSCPTCNVTIHNRCRDTLPNC
IKMKQKQQKMALVRNNSAYQNVTLRNKAHLKERPNSAIYPSDSLRQSLLGSRRGRSSLLL
SKSVSTNNIAGLMTLNDDSPLGLRRILSQSTDSLNFRSRTMSMESLNDEGEGYFTSLLDD
LEFEGREFEADSWSMAVDSTYLQTHRKDVIKRQDVIYELIQTELHHVRTLRIMDGVFRRG
MLEEVQLEPGVVHALFPCLERLLMLHTHFLTQLLTRRTQSLQPDSTYNFTITQISDLLIQ
QFSGQCADEMLKVYSEFCSRHMKAVKLYKELLARDKRLQLFIRRASRGPLLRRHGFQECI
LLVTQRITKYPVLLQRIYDNTKDNPEEAEGLSQALSCIRELLCSVDQQVLELERTQRLQE
IRSRVDPRSEAKLRSGALFRPAELLRRQLIHEGTLLWKTPSSRLKDVQVMLMTDILVFMQ
EKDQRFIFASFDKSAVVSLQSLLVRDIANQERGLFLISSESSPPEMYELYAASKDDRNTW
IRLIQQTISSCPSREEFPLIETEDKALLRRLKADIQQKDREVLELLQERVTLFSDLAEVM
GGYEVMLPSCSRNLFRAESPQAPHGEQLLTQAITEVDRLTELLLGSNFEVPLPCSSNGHH
NHTGALVINGQEVLVNGSQENQATQDGNGNQMDDKTPSEEVSQRLVNLSAQLHTLQGVVI
RQDSILELCLRESSVSPATAGVRTVRSLSRDGANDFGSLGDLALLQRQHSLLQEELGRLR
GAEGKLRDSERARAQLEKQLRDLKTNSAALGDAAGSAGSQAPSTRRESDTDPNTDTPLAS
QESMDQSDGLQECSDVEVDVISDDDDDDGDDDDDDEVDSRVSPRSESPEICRTFLKRVNP
LQTLGTVRPHTANVFSVLNPRLACCLMEL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgggccctgaggagctgcctcattttatggacacgatgtcgagcactcctcctctctct
cctcgtcctgttggttcctcattctcacctccttactgctctccaccggttgtgacctta
cggccccctgccactcgtcacctgactcagctcgacccctggaggagacacagctgggaa
cctggagctgtggcacagggatatccacccaatgacacacgcagtgtgagtcttgaagat
ctggatctggatgagatttccttagtgataaacggtgcattgaggtcaaaaagagctcga
gaagcccgcaggtctgtcactcaagcttccctgacgtcacttaccgaagaggaagttgga
gcagagcatcaggaacatcatcaatcagcgctggaggagcagtccaatcagatgcatggc
tgcagtgcctccgcccccagcctgtatatgatgcagcagatgcctagaagctccgcccct
cgcccccgctcctactgccatgagagtgtttcgtaccaccagattggaggatcatctcac
agtatagacagcgagtttgcttctccgggctgggacatagatggagggcaaataaaggct
gaggggcacaaaaacaaagaggacgcctcaggaaatcgtctggagcgaacactgagcttc
ctgcgcaagatgactgctaaaagcaagaataaagagaaggagcgcatgagggagcgggag
agagaagccagagatcgagaggcacgctacagtaatggccacctcttcaactctctcacc
gtgtctggaaccacgctttgctcggcctgcaacaagagcatcactgctaaggaggccctc
agctgcccgacctgtaacgtcaccatccacaaccgctgcagggacacgctaccaaactgt
atcaaaatgaaacaaaagcaacagaaaatggcgctggtgaggaacaattcggcctatcag
aacgtgactctgaggaataaagcccatttaaaggaacggccaaactctgccatctaccca
tcagacagtcttcgccagtcactactcgggtcccgtcgtgggcggtcttctctcttactt
tccaagagcgtctccaccaataacattgcaggtttaatgactctgaatgatgactctcct
ctggggctgcgcaggatcttatctcaatccacagactcactcaacttcaggagcagaacc
atgtccatggagtcactcaatgatgagggagagggctacttcacctctctgctggatgat
ctggagtttgaaggccgggaatttgaagcagattcctggagcatggcggtagattccacc
tacttgcagacccaccgtaaagatgttatcaagagacaggacgtcatctacgagctgatc
cagacagagctccatcacgtccggacgctgcggatcatggatggtgtgttcagacggggt
atgctggaggaggtgcagctggagccgggggtcgtgcatgcgctgttcccctgcctggag
cgcctgttgatgcttcacacgcacttcctcacacagctcctcacacggcgcactcaaagc
ctgcaacctgacagcacatacaatttcaccatcactcagatcagcgatttgctaatacag
cagttctcaggtcagtgcgctgatgagatgctgaaggtgtattctgagttctgcagtcgt
catatgaaggccgtcaaactctacaaagagctgctggccagagacaagagactgcagctc
tttatacggagggcgagtcggggtcctctactgcgtcgtcacgggttccaggagtgcatc
ctattggtcactcagcgcatcactaaataccccgtcctgttgcaacgtatctatgataac
accaaagacaatccagaggaagctgagggtctgtctcaggcgctgtcttgtatacgggag
ctgctctgttccgtggaccagcaggtgttggagcttgaaaggacacagcggctgcaggag
atccgatccagggtcgacccgcggtccgaggccaaactccgctccggagccctgttcaga
ccggccgaactgctccgcaggcagctgatacacgaaggcacgctgctctggaaaacgccc
agctctcgtctcaaagatgtccaggtcatgctgatgactgatattctagtattcatgcaa
gagaaagatcaacggttcatctttgccagttttgataaatctgcagtggtctcactgcag
agtctcttggtccgagacatagccaatcaggagcgaggcttgttcctgatcagcagtgag
tccagcccaccagagatgtacgagctttacgctgcatctaaagatgacaggaacacctgg
atacggctcatacagcaaaccatcagcagctgtccatcaagagaagaattccctctgata
gaaacagaggacaaggcccttctgcgaagactcaaagctgatatccagcagaaggacagg
gaggtgttagagctgcttcaggagcgggtcaccctgttctctgacttggcggaggtcatg
ggaggttatgaggtcatgctgccgtcctgttccagaaacctgttcagagccgagtctcct
caggcgcctcacggggaacagctgctcacacaggccataactgaggtggacagattgaca
gagctgttattaggatccaattttgaggttcctctgccctgcagttccaacggccatcac
aaccacactggagcgctagtaatcaatggacaagaggtattagtcaatggctctcaggag
aaccaagctactcaggatggtaatgggaatcaaatggacgacaagacaccaagtgaggag
gtgtcacaaaggctggtgaatctcagtgctcagttacacactctgcagggtgtggtgata
cgacaggactccatcttagagctctgcctacgagagagctccgtctctccggccaccgca
ggggttcgtacggtgcgctccctgtcccgggatggagcgaatgactttggctctctggga
gacctggccctgcttcaacgacaacacagtctgctgcaggaggagctgggacgcctcagg
ggagccgagggcaaactcagggacagcgagagagccagagcccagctggagaaacagctc
agggatcttaagaccaatagcgccgctctaggggatgcagctggaagtgcaggctcacaa
gccccatcaactcgcagagagagcgataccgaccccaatactgacaccccattggctagc
caggaatcgatggaccaatcagatggcctgcaggaatgcagtgatgtggaagtggatgtg
atatctgatgatgatgatgatgatggtgatgatgatgatgacgacgaggttgattcgagg
gtgtctccccgttcagaaagtccagagatctgcaggacattcctgaagagagtgaatccg
ctgcagaccctcgggaccgtgaggcctcacactgctaatgttttttcagttctcaaccca
agactggcctgttgtctgatggaactatag
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integrated database retrieval system
