Cyprinus carpio (common carp): 109111282
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Entry
109111282 CDS
T05134
Name
(RefSeq) iroquois-class homeodomain protein irx-4-A-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109111282
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109111282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
HD_5
DUF3094
Motif
Other DBs
NCBI-GeneID:
109111282
NCBI-ProteinID:
XP_018979772
Ensembl:
ENSCCRG00000043981
UniProt:
A0A8C1PQV5
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All DBs
Position
B19:8115958..8120648
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AA seq
442 aa
AA seq
DB search
MSFTQFGYSYPAAPQLLMSSNTLSTCYESSGSLLDSGVTASPQNTLYCPVYERRLVPSSQ
HDLIPTGVYGNSCSKSHGYDTCSTYDPDSTSYYPLGKLSEKDGVATRHSQISQSSAYYPY
DYPIGQYQYDRYGYGSVDVGTRRKNATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITK
MTLTQVSTWFANARRRLKKENKMTWSPRNKTSDEKECDDDQKDMDESQGEPIKTEQEFNA
PDSHGKDDADQLHSDLEDFDLVESDGSECESKPSFVMRVCSETRECPDNLFKKAFHESVT
ELPTDVHEFNEDRLRLTSEDNQTVNFYLQQGQKTTETKPKIWSLAQTATSLNQADYNSCM
LKGTSCSSSKCDSDSDITKRKQESPVATLRNWVDGVFHDPLFRHTNLNQTFSNSTELWTE
GISLQNNYHEHSGPITASKHTS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacacagtttggctattcatatcctgcagcaccacagcttttaatgtcttct
aacactctgagcacctgctatgagtctagtggttcactgctggactctggagtgacagct
tctcctcaaaacacgctttattgcccagtatatgaaagaaggcttgtgccctccagccag
catgacctgatccctactggtgtctatggcaactcctgctcaaagagtcacggttatgat
acctgcagcacttatgatccagattcaacctcatattatccactgggtaaactcagtgag
aaagatggagtggcaacaagacattcacaaatcagccaaagctctgcatactacccttac
gattacccaattggacagtaccagtatgacagatatgggtatggatctgtagatgtgggc
acaagaagaaaaaatgctaccagagagaccaccagcacactgaaagcatggctgcaggag
cataaaaagaacccgtatcccaccaagggcgagaagatcatgctggccatcatcacaaag
atgacccttacgcaggtgtccacctggttcgccaacgcacggcgaagactcaagaaggaa
aacaagatgacgtggtcaccacgcaacaagacctcagatgagaaagagtgcgatgacgac
caaaaagatatggacgagtcacagggggagccgataaaaaccgaacaagaattcaatgct
ccagacagccatggaaaggatgatgcagatcaacttcacagcgatctggaagacttcgat
ctagtggaatcagatggctcagagtgcgaatccaaaccatcctttgtcatgcgcgtttgt
tcagagaccagagaatgtccagataacctttttaaaaaggcttttcacgaatccgttacc
gagctcccgacagatgtccatgaatttaacgaagaccgtttaagacttacctctgaagac
aaccagacagtgaacttctaccttcaacaaggccaaaagaccactgagaccaagccaaaa
atctggtcgcttgcacagactgctacgtcgttaaaccaagccgattacaactcatgcatg
cttaaaggaacttcgtgctcttcttcaaagtgtgactcagactcagacataacaaagagg
aaacaagagtctccagtggccactcttagaaactgggttgacggtgtgtttcacgatcct
ttattcaggcacaccaacttaaaccaaactttcagcaactccacagagttatggactgaa
ggaatttccttgcagaataactaccatgaacactcaggacctattactgcttctaaacat
acttcataa
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