Cyprinus carpio (common carp): 109111437
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Entry
109111437 CDS
T05134
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109111437 (hps3)
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
109111437 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
109111437
NCBI-ProteinID:
XP_042568166
Ensembl:
ENSCCRG00000046990
UniProt:
A0A9Q9VP37
LinkDB
All DBs
Position
A22:complement(21412107..21424784)
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AA seq
1039 aa
AA seq
DB search
MVHVYNCHPFASQHIVAAEQEPGLVCCGGGAVFVVSAGGCKIEAYELQREGCPLICRFSS
MGSVLSIRHSAVGDYLVTIEEKNKATYLRAYTNWRYQAVEKTRVGVRLLGHLLRGSSFRG
TPKEQMEIIEIPLFEPPLCMACCSLTGDLLVGCAKSLVVFSLKRQTLSEQLSVLDFERVL
ILHIQGWSPSQVAFCAGYVALQTELEVLVVKLTPQQKSSAAAEEHALLPEDIMTETSIDE
DAEMTKDGFSPLHAQEDFFLFPKHQEMLGNEAQECGISLVLEWTGMEAESRGDMSVVYVL
FRRFAPDFFQGCSVEETRLHSLQLHPMFTGKQKEASDSKRGEPTCVFVFFSLPNTGYMYS
LKNTVELVSTYQYPEKAHQAVLSDQFLYIITRNALQCFTVRCSAVAARVDDPYIDTTMKA
CPPVTMEVCALRIQLFIGLKLLCQDGNQIVLLTAADVDSKEDTERTARRNTESREHRALT
GILVAVGLEPSSTPTLESLLSRSFLSRKTSVCKPTEPADSGHGWNLYVITSVSTLQLYRE
IVEYSKRYEQSSPSSQSCVHLLSEGHLLLRTALLLQDCESAERAQLQEAFQESCAQLGDC
FSRFDKKDCHLALPYYKMSGLAVTDVIKRNMPVSSISAGYGKGFIFFLKHSLYEETMEEL
SKDMADKVLEIFSVAEPAQLPHVVSSPSMLNADPYSAMTHLRQLEASGAPSITLSLCVAS
QALRKGDLHTYRQQMDRHAEMLQVYGFIEEPKLLLHGRGKGVLPTILAQHLHDTHEGLLV
AAVVALHENSKIRLEEADLFFQELCKDGAEADSSPQLLVDFWEALLVASSHEAIIQELLF
RLTSVYIDRITRRDRSGVKALKTAEDLINSCSHYGMLYPWVSILTPVQFNITHDHQEDLH
KLQSLLCGPTLEVSSILPLLEQLTDSDRTGLSVHVLCATKLGQHETSIDRLLDRCPEAII
PYANHELQNDKLSLWWQKLFPEVCDRIRTAGNDNTVLLSALKETLVVAAKELNPLDFLDL
LPDDGTAHFFLPHLLECSQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggtccacgtctataactgtcacccgttcgcgtctcagcacatcgtggcggcggagcag
gagcccgggctggtgtgctgcggcggcggggcggtgttcgtcgtcagcgcgggaggctgt
aagatcgaggcgtacgagctgcagcgcgagggatgtccgctcatctgccgcttcagcagc
atgggctccgtgctcagcatccgccacagcgccgtgggggactacctagtgaccattgag
gagaagaacaaggccacgtatctcagggcctacactaactggaggtaccaggctgttgag
aagactcgtgtgggggtgcgtctgttgggacacctcctgcggggctcgtccttccgcggg
actcccaaagagcagatggagattattgagatccctctgtttgagccgccgctgtgtatg
gcgtgctgcagtcttactggtgatcttctggtgggctgtgctaagagtttggtggtgttc
agtctgaagcgtcagacgctgagcgagcagctctctgtgctggacttcgagcgggtgctg
attcttcatatccagggctggagcccgtctcaggtggccttctgtgccggatacgtagcc
cttcagacggagctggaggtgctggtggtaaagctcaccccgcagcagaagagcagcgcg
gctgcagaggagcacgcactgctaccagaagatatcatgactgaaaccagcatcgatgaa
gatgcagagatgacaaaagatggattcagccccctgcatgcgcaagaggacttctttctg
ttcccgaagcatcaggagatgctgggaaacgaggcgcaggagtgtggcatctctctagtt
ctggagtggactggtatggaggcagagagccgaggggacatgagcgtggtttacgtctta
ttcaggcggtttgcgcctgatttctttcaaggttgcagcgttgaggagacacgcttgcat
tccctgcagctccaccccatgtttactggcaaacagaaagaagcctccgactccaaaaga
ggggaacctacttgtgtgtttgttttcttctccttgccgaacactggctacatgtacagc
ttgaagaacacagtggagctcgtgtccacctaccagtacccagaaaaggcccatcaggct
gtgctcagtgaccagttcctctacatcatcaccaggaatgctctccagtgtttcactgtc
agatgcagtgcggtagcagctcgggttgatgacccttacatcgacaccaccatgaaggcc
tgtcctcccgtcacgatggaggtgtgtgctctgaggatccagctcttcatcgggctgaag
cttctctgtcaggacggaaatcagatcgttctcctgacagcagcagatgtggacagcaaa
gaggacacggagagaacagcccgcagaaacactgaatcgagggaacacagagccctgaca
ggcattttagtagctgtaggtctagagccgtcctcaacgccaacactggaaagccttctg
tccaggtccttcctgtccaggaagacctctgtctgcaagcccacagagccggctgacagc
ggtcacggctggaacctctacgtcatcacttctgtgtccaccctgcagctctacagagaa
atagtggagtacagtaagcgatacgagcagtcgagcccgtcgtctcagagctgcgtgcac
ctgctgagcgagggtcacctgctgctgcggacggctctgctcctgcaggactgtgagtct
gccgagagagcgcagctgcaggaggcctttcaggagagctgcgctcagttaggagactgc
ttcagcaggtttgataagaaggactgtcatttggctcttccatactataagatgtcaggc
ctcgccgtgactgatgttattaagaggaatatgcccgttagcagcatctcagctggttat
ggcaaaggattcatcttcttcctgaagcattcgctctatgaggaaaccatggaggagctt
agcaaggacatggctgataaagtcctggagatcttcagtgtggccgaacccgctcagctt
cctcatgtggtgagcagtccgtccatgctgaatgctgatccgtacagcgccatgacccac
ctgagacagctggaggcctcgggcgccccgtccatcaccctgtccctgtgtgtagcctcc
caggccctgcgcaagggtgacctgcacacctacaggcagcagatggaccgccacgctgag
atgctgcaagtgtacggcttcatagaagagcccaaactgctgctgcacggccgagggaag
ggcgtgctgcccaccatactggcccagcacctgcacgacacacacgaggggctgctggtg
gcggcggtcgtggcgctgcacgagaacagcaagatcagactggaggaggccgatctcttc
ttccaggagctgtgtaaggatggcgccgaggctgacagcagtcctcagttactggtggat
ttctgggaggctctgttagtagcgtcctctcatgaagccatcatccaggagctgctgttt
cgtctcacgtccgtctatatcgaccgtatcacgcgcagagatcgttccggcgtcaaagcc
ctcaaaactgctgaggatctgataaactcctgctctcattatgggatgttgtatccgtgg
gtgagcatcctgacgccggtccagttcaacatcacccatgaccaccaggaggacctgcac
aaacttcagtctctgctgtgcggcccaacgctggaggtctcgtctatcctgcctctgctg
gagcagctgaccgactctgaccgcaccgggctcagcgtacacgtgctctgcgccaccaaa
ctgggccaacacgagacatccatcgacagactcctagaccggtgtccagaagccatcatc
ccctacgccaaccatgagctacagaacgacaaactgtctctgtggtggcagaagctgttc
cctgaggtctgtgacaggataaggacagcaggaaatgacaacaccgtcctcctctcagca
ctcaaagaaactctggttgtggcagcgaaggagttgaacccgctggacttcctggacttg
ttgcctgatgatggaacggcgcatttcttcctgccacatctactcgaatgcagccagtga
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integrated database retrieval system
