KEGG   Cyprinus carpio (common carp): 109111442
Entry
109111442         CDS       T05134                                 
Name
(RefSeq) replication protein A 14 kDa subunit-like
  KO
K10740  replication factor A3
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03030  DNA replication
ccar03420  Nucleotide excision repair
ccar03430  Mismatch repair
ccar03440  Homologous recombination
ccar03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109111442
   03420 Nucleotide excision repair
    109111442
   03430 Mismatch repair
    109111442
   03440 Homologous recombination
    109111442
   03460 Fanconi anemia pathway
    109111442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccar03032]
    109111442
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109111442
DNA replication proteins [BR:ccar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    109111442
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     109111442
   MMR (mismatch excision repair)
     109111442
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     109111442
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 109111442
NCBI-ProteinID: XP_018979926
Ensembl: ENSCCRG00000047115
UniProt: A0A8C1JV40
LinkDB
Position
B19:6723108..6724171
AA seq 121 aa
MTGVYESPKPRINASMLSQYIGRPVCFVGRLEKVHPSGKALTLSDGEGKSASVELSEPLD
EELSGIVEVIGMVSNKGTVMAVSYTQYREDKISFDLELYNEGLKVLHDFPQHYPFEVSLS
G
NT seq 366 nt   +upstreamnt  +downstreamnt
atgacaggcgtttacgagtctcccaaacccagaatcaacgcgtcgatgttgtctcagtac
atcggtcgcccagtctgcttcgttggacgattagaaaaggtgcatccatcaggaaaggct
cttactctgtcagatggagaaggaaagtctgcatcagtggagctcagtgagcctctggac
gaggagctgagtgggattgtggaggttattgggatggtgtcgaataaagggacagttatg
gctgtgtcatatactcagtatcgagaggacaagatctctttcgatctggagctgtataat
gaaggcctgaaggttctccatgattttccccagcattacccgtttgaggtgtcattaagt
ggttaa

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