Cyprinus carpio (common carp): 109111495
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Entry
109111495 CDS
T05134
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109111495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109111495
03021 Transcription machinery [BR:
ccar03021
]
109111495
03036 Chromosome and associated proteins [BR:
ccar03036
]
109111495
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
ARID
109111495
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109111495
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109111495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
109111495
NCBI-ProteinID:
XP_042631961
Ensembl:
ENSCCRG00000007191
UniProt:
A0A9Q9Z5W1
LinkDB
All DBs
Position
A19:1427922..1493098
Genome browser
AA seq
2234 aa
AA seq
DB search
MAAQVASLNTSPPAELKKPEREPRDEPVLADNKEPRADGGSPGQRELQDGADVGNAAGGG
AGDPDMKNGNGNPSRVNNNNSQNDPDGSNHPGTAPHHPGAFPPPPYNYNQHYNRPPFQHG
GQQSPGMAGPAVMDPYPPNSHEHGYPNHFNNYSAFPNRTPYHQGQGYGVNSPRNSQPPSA
GGPPGKQPPPGGTTPMSASYNSQRYSMGTAQPTSTPTLNQLLTSPSSTRSYQSFPAGEFG
GQEAAAKGPGDMGSVSQFGGGHPAWQQRSHHPPPMSPGNTGQALNRAQPPGPMDQVGKIR
GQHYAGGNPYSQQQGPPPGSQQGPPYPGQGYGPTGPQRYPMGMQGRTPGSMSGMQYGQQI
GFGQHGSGGYAQNQGGYYGQQGPSPHGGPQQSPYPQQASAGAASQPPYSQQTPAPPHGQS
GPPYGPPQGQPPYSQTPQPQSGQPPFPQSQGPPQSQGPSQGQQGAQPGYTQPPSAPGQPP
QQQGPSQQPQGPPQSQPPVSAPPQSSQQASGQGQPSPYSQTPPLQSQQQSPFQRFPPPPQ
ELSQDSFSSQSSAPSSNQPMGSGKGGPEETMQGRPSSLPDLSGSIDDLPTGTEGALSPGV
STSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASGPASRTGPLSPGAMPG
SQMPPRPSSVQSDGMLHSSMGQDRVYMRNPQMPYGSPQPGSTLSPRQSSGGQMHGGMGSF
PQNNSMGNYGPQGGQYGPQGYPRPPGYGGMPNANYPGGPGMGGSMNPMAGQGGGGSYGGM
PPGRMGPGQMGTRPYGPGMGPNMGGMPPQVASGMCPPPGMNRKPQDPAAAAGMHHGPSNS
IHRPPGYPNMNQGMMGAGSPYAPPMNSMQGMMNQAGPYPMPGNMSNNSAGMAPSPEFGMD
KLNQPQKLNNKVDGTPKPESKKKSSSSTTTNEKITRLYELGPEPERKMWVDRYLAFAEEK
AMGMNNLPAVGRKPLDLFRLYASVKEIGGLTQVNKNKKWREIATNLNVGTSSSAASSLKK
QYIQCLYAFECKIERGEDPPPEIFNNDPKKNQAKVQPPSPAGSGSLQGPQTPQSTSSSMA
EGGDLKPPTPASTPHSQMPPMPGARSSVNLQDPFADGGDPAFSRRNSVTPNSGYQPGMGG
PDMMGRMGPFEPNKDPFGGMRKAGEQFMSPSQGPNSGMGEQYNRGPPGPMGNIQMGQRQQ
YPYGPGYERRPDSSMGPDVSVGPQPNMMPSDAGMYSPNRPPQQQRLDSYSNQYPGQGAPP
TGPYPNQQSGMYPQQQPNYTQKRPVDGVYGPPAKRHEVDMYPFSGQQQGPQAPVGPQSQP
EMYNQYNAYPGTDRRPPGPQSQFPFGFGRDRGPNAGGPNSQPSIPPQMMGSSMSGSMPSV
PDGPQGPMWPGRNEMNYPNYHNRQGPPGVPSQSQGYHGMNRSEDMMPSDQRMNHEGPWAG
HVNQRQPPFGPGASGPQMARPLQSNFQSSQNHIPQVSSPAPMPRPMENRTSPSKSPYMHT
GMKIQKAGPPVPASHIAQAPMQPPLIRRDMAFPPGSTEATQPVLKPRRRLTMKDIGTPEA
WRVMMSLKSGLLAESTWALDTINILLYDDNSISNFNLNQLPGFLELIVEYFRRCLIEIFG
ILKEYEVGDPGQRTLIDPDAIDSEMSDEEGPEAEQMEEEDEDDDEDVENNTVQTSQVQVK
QEKEEFTQVQKSNDKNDVEEREGEDTSCKDHLSSSTPLQDTSASQERPKQASKFDKLPIK
ILRKKDPFVIGRASKLGRRQAFDSGLIHWSVGGGDTTEHIQTHFESKMELLKHRKRVPVK
VEPRKKVSHVVETVTEDAEKAETNEEQQKVQPQSSPVQPSSEGKSTTTASTSTSITATID
DVLSARQGSVTEEAVRGSQDGDREKNMFLFGIDLAQQSRNIKILEDEPHSKDETPLCTLS
DWQDSLARRCVCVSNIVRSLSFIPGNDLEMSKHPGLLLLLGRLVLLHHWHPERKQAPVTY
EKEEEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHW
AVCPSAEAIDPFPTLGLNGTLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGFL
VRMVGDRKVPVCREMAVVLLANLAQGDSVAARAIAVQKSSVGNLLGFLEDSLAATQFQQS
QGSLMHLQSAHFEPTSVDMMRRAARALHALAKVEENHSEFRLYESRLLDISVSPLMNSLV
SHVICDVLFLIGQS
NT seq
6705 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgcatctctcaacactagcccgcccgccgaactcaagaagccggag
cgggagccgcgggacgagccggtgctcgcagacaacaaggagccccgcgccgacggcgga
tccccgggacagagggagctgcaagacggggccgatgtagggaacgctgccgggggagga
gcaggcgaccctgacatgaagaacggcaacgggaacccgtccagggtgaacaataacaat
agccagaatgatcccgacgggagcaaccaccccggcacggctccgcaccacccgggcgcc
ttccctccgcctccgtacaactacaaccagcactacaaccggcccccttttcaacatggc
ggacaacaaagccctggcatggcagggccggcggtgatggacccgtacccacccaattcg
cacgagcacggctacccgaaccacttcaacaactacagcgccttcccgaaccggactccg
taccaccagggacagggctacggcgtgaattcgccgcgaaacagccagccgccttcagcc
gggggtccgccgggcaagcagccgccgccaggaggaactactccgatgtctgcttcctac
aacagccagaggtacagcatgggcaccgctcagcccacgtccaccccgacgctgaaccag
ctcctgacctccccgagctccacgaggagctaccagagcttccccgcgggcgagttcggc
ggccaggaagcggcggccaagggaccgggggacatgggcagcgttagccagttcggtggg
ggccatccggcctggcaacaaagaagccatcaccctcctcccatgagcccgggaaacacc
ggacaagccctcaacagagcccagcctccaggccccatggaccaggtggggaaaattcga
gggcagcactatgctggtggaaacccctactctcagcagcaggggcctccccctggctcc
cagcagggtcctccttacccaggacagggttacgggcccacgggaccccagaggtatcct
atgggcatgcagggccgcactcccggaagcatgagcggaatgcagtacggacaacagatt
ggctttggacagcatggctccggtggttatgcgcagaaccaaggtggctactacggacaa
cagggcccttcacctcacggaggcccccagcaatctccatacccccagcaggcctccgct
ggagcggcctctcagcccccttactcccagcaaacccctgctcctccccatggccagagt
gggcccccttacggtcccccccagggccagcctccatactcccagactccacagccgcag
tcaggacagccacccttcccccagtcccagggtccccctcagtcacagggtccgtctcag
ggccaacagggggcgcagcccggatacactcaaccaccttcggccccagggcagcctcct
cagcagcagggaccctcacaacagccgcagggcccgccacaatcacagccgcccgtctcg
gcgccccctcagtcctcccagcaggcttcagggcagggtcagccctcaccttactcccaa
acccctccactgcagtctcagcagcagtcgcccttccagcgctttcctccgccacctcag
gagctgtctcaagactccttcagctctcagtcttcagctccttcctccaatcagcccatg
ggctccgggaagggcggtccagaggaaaccatgcagggacgaccgtccagcctgcctgat
ctgtcgggctccatcgatgacctccccacaggcacggagggtgctctgagtccgggcgtc
agcacgtcaggagtgtccagcagtcagggggaacagagcaacccggcgcagtcacccttc
tcgccccacacctcccctcacctgccggggatccgcggcccgtcaccctcacctgtgggc
tcgcccgccagcggcccggcctcgcgcacgggacccctctcacccggagccatgcctgga
agccagatgccccctcgaccctcgagtgtccagtcggatggtatgctacattcttccatg
ggtcaggatagagtatacatgaggaaccctcagatgccatacggctctcctcaacccggg
tcaactttatccccacggcagtcatctggaggccaaatgcatggtgggatgggttccttt
ccacagaacaactccatgggcaactatgggccgcagggtggccagtacggaccacaaggt
tacccaaggccaccaggttatggaggcatgcctaatgctaactatccgggtggtcccggc
atgggcggctccatgaaccctatggctggtcagggtggaggcgggtcatatggagggatg
cctccgggacgcatgggtccggggcagatgggtacgaggccatacggccctggcatgggc
cccaacatgggcggcatgcctcctcaggtggcgtcaggaatgtgtccgccgcctgggatg
aacagaaagcctcaggatcccgcagcagcggcggggatgcaccatggcccatccaactcc
atacacagaccgcctggatatcccaacatgaaccaaggaatgatgggagccgggtctccg
tatgccccgcccatgaacagcatgcagggtatgatgaatcaagcgggaccgtaccccatg
cccggaaacatgtccaataactctgccggcatggctcccagtccagagtttggcatggac
aaactcaaccaacctcagaagttgaataacaaagtggatgggacgcctaagcctgaatcg
aaaaagaagtccagttcctcaaccaccactaatgagaagataacccgtctatatgagctg
gggccagaaccggagcgcaaaatgtgggtggatcgttaccttgcgtttgctgaggagaaa
gccatgggcatgaacaatctccccgcggtgggccgcaagcccctcgacctcttccgcctc
tacgcgtctgtcaaagagattggcggcctcactcaggtgaacaagaataagaagtggagg
gaaatagccactaacctgaatgtgggcacatccagtagtgctgccagctctctgaagaaa
cagtacatccagtgtctgtacgcctttgagtgcaagatcgagcgaggggaagatccgccg
cccgaaatcttcaacaatgaccctaaaaagaaccaggccaaggtccagcctccttcacca
gctggatcaggatcgttacagggtcctcagacgcctcagtcgaccagcagttctatggct
gaagggggagacctgaagccccctacacctgcgtcaacaccgcacagtcagatgccaccc
atgcctggtgcaaggagcagtgtgaatttacaggacccgtttgctgacggtggggatcca
gctttttccagacgtaactccgtgacccccaattcaggttatcagcctggtatgggtgga
ccagacatgatgggccgcatggggccttttgagcccaataaggacccctttggtggtatg
agaaaagcaggtgagcagttcatgagcccaagtcaaggcccaaacagtggcatgggtgaa
caatataaccgaggccccccaggacctatgggaaatattcagatgggtcaaagacaacag
tacccatatggtccaggatatgagagaagaccagattcaagtatgggcccagatgtcagt
gtgggtccacagccaaacatgatgccttcagatgcagggatgtactcacccaaccggccc
ccacagcagcagaggcttgattcttacagtaatcaataccctggccaaggtgctccccct
actggaccatacccaaaccagcagtcaggaatgtacccacaacagcaaccgaattacaca
cagaagagaccagttgatggtgtttacggtcctcctgcaaagcgtcatgaagtggacatg
taccctttcagtggtcagcagcagggaccccaggccccagttggacctcagtcccaacca
gaaatgtataaccagtataacgcctatccaggcaccgacagacgcccaccaggcccacaa
agccagtttccttttggttttgggcgagatcgaggacctaacgcaggcggtccaaactcc
caaccctccataccaccacagatgatgggtagctccatgagtggctccatgccttcagtc
cccgatggaccccaaggtcccatgtggcctgggcgtaatgagatgaactacccaaactat
cataatcgccaggggccccctggtgtcccttcccaaagtcaaggctaccatggcatgaat
cgttctgaagacatgatgccttcagatcagcgcatgaaccacgagggaccttgggctggc
catgttaaccagcggcagcccccatttgggcctggagcctctgggccacagatggccaga
cctcttcagtccaactttcagtcctcccagaaccacattccacaagtgtcgagccctgca
cccatgccaagaccaatggagaacaggacctcgcccagtaagtctccatacatgcacaca
gggatgaaaatccagaaggctggacctccagttcctgcatcacacattgcccaggcgcca
atgcagccccctctgattcggagagacatggcattcccaccaggttcaacagaggccacg
cagcctgttctgaaaccacgtcgtcggcttaccatgaaggatattggaacaccagaggcc
tggagagtcatgatgtccctcaaatcaggcttgttagccgagagcacttgggctttggat
accattaatattcttctttatgacgacaacagcatttctaactttaatctgaaccagctt
cctggcttccttgagctcattgttgagtatttccgaaggtgcctcattgagatctttggc
atcttgaaagagtatgaggttggagaccctgggcaacgtacgctaattgacccagatgcc
attgactccgagatgtctgatgaggaggggccagaggcagagcagatggaagaggaggat
gaggatgacgatgaagatgtagagaacaacactgtgcagacatcacaggtccaggtcaag
caagaaaaagaggagttcacacaggtccaaaaatccaatgacaagaatgatgtagaagag
agggaaggcgaggatacttcatgcaaagatcatctcagctcatccaccccattgcaggac
accagtgcttcccaggagaggccaaagcaggctagtaaatttgacaagcttcccatcaag
atattgaggaaaaaagacccatttgtgattgggcgcgctagtaaattgggtcggcgacaa
gcctttgatagcggtcttatccattggagtgtaggtggtggcgacaccacagaacacata
caaacccatttcgagagcaagatggagctcttgaagcatcggaaacgggtcccagtgaaa
gtcgagccacgtaagaaggtatctcatgtagtggagactgttacggaggatgctgagaag
gctgagacaaatgaagagcagcaaaaagtacaacctcagtcatccccagtccaaccatca
tccgaaggtaaaagcactacaacagcaagcacgtcgacgagtataacagccaccattgat
gatgtactctcggctcggcaaggctccgtgacggaggaagcggtccgaggcagccaggat
ggtgacagagagaaaaatatgtttctctttggcatcgatcttgcacaacagagtcgcaat
atcaagatcttggaggacgagccacacagcaaggacgagaccccgctctgtacgctctcg
gattggcaggattccctcgcccgccgctgcgtctgcgtttccaacattgttcgcagtctt
tccttcattcctggcaatgatctggagatgtcgaagcatcccggacttttgctgttactt
ggccggctggtgctgttgcaccactggcatcctgaacgcaagcaggccccggttacttat
gagaaagaggaagaggaagacgaaggggtcagctgcgagcgagatgagtggtggtgggac
tgtctcgaagttctgcgggaaaactgcttggtcacgttagcaaacatctcaggtcagctg
gacctgtccatctaccctgaaagtatttgcctgccgctgctggacggcctgctccactgg
gctgtgtgcccttcggcggaagcgatcgaccccttccccacattggggctcaacgggaca
ctgtctccccagagacttgtcctggaaaccctcagcaagcttagcatccaggataacaat
gttgacctcattctggctacgccgcctttcagccgtttggagaagctctacggcttcctg
gtgcgcatggttggcgaccgcaaagtgcccgtctgccgggagatggctgtggtgctgcta
gccaacctggcacaaggcgacagtgtcgcggcccgggctattgctgtgcagaaaagcagc
gttggaaaccttcttggcttcttggaggacagtcttgcagccacccagttccaacagagt
cagggctcgttgatgcacttacaaagtgcgcacttcgagcccactagtgtggacatgatg
cggcgggcggcacgtgccctgcacgctcttgccaaagtggaagagaaccactcggagttc
aggctgtacgagtcacggctactggacatatcagtgtccccgctcatgaactctttggtg
tcccatgtaatctgtgacgtactttttctgatcggccagtcatga
DBGET
integrated database retrieval system
