Cyprinus carpio (common carp): 109111805
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Entry
109111805 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109111805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109111805
03036 Chromosome and associated proteins [BR:
ccar03036
]
109111805
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109111805
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109111805
PBAF complex
109111805
GBAF(ncBAF) complex
109111805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
DUF919
Motif
Other DBs
NCBI-GeneID:
109111805
NCBI-ProteinID:
XP_042600651
Ensembl:
ENSCCRG00000019722
UniProt:
A0A9R0AL87
LinkDB
All DBs
Position
B19:complement(17937648..17949258)
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AA seq
999 aa
AA seq
DB search
MATQALGSAAGCTTSQAGCSASLSRRMDGGPCCKFWESPEIISQLETVRIWIGKHYKKYV
QTDAPSSKSLSGLVIQLLQFQEDSFGRRANNPSFTKLPAKCFQDLRPGGALCHILGSVYK
FKTEQGWRRFDLQNPSRMDRNVEMFLSVEKALTQNNLLSRPVVYLSPDLEQKQALKLKDI
VVRHQGTVTEEKSQASHQIYPSPSTADEEEWLRPVMRLDRQVMVHWGMCPDSYDSLISAS
DVAGEVEEPPNPDRCRKVNAKWVLDTDTYNEWMNEEDYEIDENGNSMSFRRRIYQSTEKP
GKKRRRSPSPPSSEPKKKGGKKSLGVYKRRGQPEEAEPEEDLTKDMEDPTPVPNMEEVIL
PKNVNLKKDSENTPVKGGIMTDLDDQEEDLLSGVRDEEEQREFGRGMEGEESATEQTHHI
IVPTYASWFDYNCIHQIERRALPEFFNGCNXLLMKILFVSGSSSLNSTXTCSYLVCRYLA
YRNFMIDTYRLNPQEYLSSTSCRRNLTGDVCALIRVHSFLEQWGLINYQVDAESRPLPMG
PPPTPHFNVLTDTPSGLVPLQHRPLQVSASQHMLHFPEKLREKPSDLQNFGLRTDIYAKK
HPKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPY
LENSEASMGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRAREEAP
PEIFSASFHKTQRLRHNLDPAFTLQTGSIAELDPDHSENTDGSGIETMNTEYEQHEKLES
DSILAERVKNEEKEESEGERGEESTAEESFDMGLTQGDGEVMKRRVELELVEGNISTAAA
AALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQ
RQQLLSERQNFHLEQVKYAEMKARQNVEQQQPTGATQSSSSTAYNPLHHGHSVGSAGPGQ
IVGARHSGAPNGMYQTPLSSQAMGPHPCNVFNDLRPKLS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggctacacaagcgctgggctccgctgctggatgtacgacgagtcaagccggttgtagc
gcttcattgagccgaagaatggacggtggaccgtgctgtaaattctgggaaagcccggaa
ataatctctcagttggagacggttcgcatctggattggaaagcattataaaaagtatgta
cagactgatgctccctccagcaagtctctgtctgggctggtcatccaactgctgcagttt
caggaagattcatttggccgtcgagcaaataacccaagctttacaaaactcccagcaaag
tgttttcaggacctaaggccaggcggtgctctctgccatattctgggatcagtgtacaag
ttcaagacagaacagggctggagacgctttgatcttcagaacccatccagaatggatcgc
aatgtggaaatgttcttatctgtggagaaagctctgacacagaataacttattaagcaga
cctgtggtgtacctgtctcctgatcttgagcagaagcaagctcttaaactcaaagacatt
gttgtgcgacaccagggcacagtgacagaggagaagtcccaagcctcccaccaaatatac
ccatccccctccacagcagatgaagaagagtggcttagaccagtaatgcgattggatcga
caagtgatggtgcattggggcatgtgtccagacagttatgactcacttatatcagcaagt
gatgtagctggagaagtagaggaacctcccaatccagacaggtgccggaaggttaatgct
aaatgggttcttgacacagacacatataatgagtggatgaatgaggaagattatgagatt
gatgagaatgggaatagtatgagtttcaggcggcgtatctaccaaagcacagagaaacct
ggaaagaagcggcgacgctccccatctccaccttcttctgagcctaagaagaaaggagga
aagaaaagcttaggtgtgtataagaggcgtggtcaaccagaggaagcggagccagaggag
gacctcactaaagacatggaagatcccacacctgtccctaacatggaagaggtcattcta
cctaaaaatgtgaacctgaaaaaagacagtgaaaacactccagtcaaaggagggattatg
actgatttagatgaccaggaagaagacctgctttctggtgtccgagatgaggaggagcag
agggagttcggccgtgggatggagggggaggagagtgccacagagcaaacgcatcacatc
attgtgcccacctatgcctcctggttcgactacaactgtattcatcagattgagagacga
gctctgcctgagttcttcaatgggtgtaattagttgcttatgaaaatactatttgtatca
ggttcatcatccttgaactctacataaacatgttcatatcttgtttgtagatatcttgca
taccgcaactttatgattgatacataccggctgaaccctcaggagtatttgagctcaacc
tcctgtagacgaaacctgacaggagatgtgtgtgcacttataagggttcattcatttttg
gagcagtgggggttgatcaactaccaggtagatgcagaaagtcgacccctccccatggga
ccacccccaacaccacactttaatgttcttacagacacaccgtctggactcgtcccacta
cagcacagacccttacaggtttcagcttctcagcatatgttgcatttcccagaaaaattg
agagaaaaaccatctgacctgcagaactttggtctgcggactgatatttatgctaagaaa
catccaaagagtaaaggcgctagtgcagggagagaatggacagaacaggaaacactctta
cttttggaggctttggagatgtataaagatgactggaataaggtgtcagagcatgtgggc
agtcgcacacaggacgactgtattcttcacttcttacggttgcccatagaggacccatac
ctagagaactctgaagcctcaatgggtcctctggcctatcagcctgtccctttcagccag
tcagggaaccctgtaatgagcactgttgcttttcttgcatctgtggtcgacccccgagtg
gcctctgcagccgccaaggcagctttagaggaattctcaagagcaagagaagaggcccca
ccagagatattcagtgccagctttcacaaaacacagcgactccggcataatttagatccg
gccttcacactccaaacgggcagcattgcggaacttgatcctgaccattcagaaaatact
gatgggagtggtatagaaacgatgaacactgaatatgagcagcatgaaaagcttgagagt
gacagcatcttggcagagcgtgtgaagaacgaggagaaagaagagagtgaaggagagagg
ggagaagagagcacagcagaggagagttttgacatgggcctcacccaaggggacggggag
gtgatgaagaggagggtggagcttgagctggtggagggaaacatctccacagctgctgct
gcagcactggcctctgcagctaccaaagcaaagcacttggctgcagtagaagagaggaaa
atcaaatctctggtggctctgctggttgagactcagatgaaaaagttggagatcaaactg
agacactttgaagagctggagaccattatggatcgagaaaaagaggccctggagcagcag
aggcagcagttattgtcggagaggcagaacttccacctggagcaggtgaaatatgccgag
atgaaggcacggcagaatgtagaacagcagcaaccaacaggagctacacagagcagcagt
agtacagcatacaaccctcttcaccacggtcattcggtgggcagtgctggtcctggacag
atcgtgggtgctcggcactctggagctcccaatggcatgtaccaaactccactgtcctca
caggcgatggggccgcacccatgtaacgtcttcaacgacttaagacccaaactcagttag
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integrated database retrieval system
