Cyprinus carpio (common carp): 109111853
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Entry
109111853 CDS
T05134
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04080
Neuroactive ligand-receptor interaction
ccar04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109111853
04081 Hormone signaling
109111853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109111853
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccar03310
]
109111853
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109111853
Nuclear receptors [BR:
ccar03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
109111853
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109111853
NCBI-ProteinID:
XP_042600949
Ensembl:
ENSCCRG00000007440
UniProt:
A0A9Q9XFN0
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Position
B19:1716446..1848633
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AA seq
555 aa
AA seq
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MQFASRLHVVNATADCILLKCIELRHFCRINLRFFNIFVCVPLKIFIMNYCMSDMYDIGH
GVSGGYAVPPGGEYCMYAGEGPGFTRCEPQPLHHHPPNMEQAWPPSQPYGCPFTGGNPVF
KSELCSMEVPLSHYHQPDYYSDGRPDFSQMQWMQGPHRKGYIPSYLDKDELCVVCGDKAT
GYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCITVGMA
TDLVLDDSKRLAKRKLIEENRERRRREEQQKTVWERPEPTQEEWELIRVVTEAHMATNAQ
GNHWKQKRKFLVEEAMLLNEITCNLFCTSDQSAVGVKEAKPEDIGSAPIVNAPEGSKVDI
EAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESE
TLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGL
TSVERIERCQEEFLLAFEHYINYRKHKVSHFWPKLLMKVTDLRMIGACHASRFLHMKVEC
PTELFPPLFLEVFED
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgcttcacgacttcatgtcgtcaatgcgaccgccgattgcattctcctcaag
tgcattgagctcagacatttctgtcgcattaacttgagattttttaatatttttgtgtgt
gtgcctttgaagattttcataatgaattactgcatgtcagacatgtatgacataggccac
ggtgtgagcgggggatatgcggtgcctccgggaggcgagtattgcatgtacgctggagaa
gggcccggtttcacccgctgtgagccgcagccgttacaccaccatcctcccaatatggag
caggcctggccgcccagccagccctatgggtgcccgttcactgggggcaaccctgtgttc
aagagcgagttgtgctctatggaggtgcctctcagtcactaccatcaaccagactactac
tccgatggcaggccggacttctctcagatgcagtggatgcaggggccacacaggaaaggt
tacataccaagttacctggacaaggatgagctgtgtgttgtgtgtggggacaaagcgact
ggttatcattaccgctgcattacctgtgagggctgcaaagggttttttcgacgcacaatt
cagaagaacttgaacccgacatacgcgtgcaagtacgagggcaagtgtgtcattgacaaa
gtcacacgcaaccagtgccaagaatgtcgcttcaagaaatgcatcactgtcggcatggca
acagacttggtgttggatgacagtaagcgtctggccaagcggaagctgatcgaggagaac
cgagagcggcggcggcgcgaggagcagcagaagacggtgtgggagcgacccgagcccacg
caggaggagtgggagctgatccgggtcgtcactgaggcccatatggccacaaacgcccaa
ggcaaccactggaaacagaagcgcaaattcctggtcgaggaagcaatgctacttaatgaa
ataacatgtaatttattctgtacttctgaccagagtgcagtgggggtgaaggaagccaag
cccgaggacatcggttctgcgcccatcgtcaacgcaccagagggaagcaaagtggacata
gaagccttcagtcagtttacaaaaattatcacccccgccatcactcgtgttgtggatttt
gccaaaaagttgcccatgttctgtgagctgccttgtgaggaccagatcattttgctgaaa
ggctgctgtatggagatcatgtctctgcgagcggcagtgcgatacgatcccgagagtgag
actctgacgctgaatggggagatggctgtcacacggggccagctcaagaacgggggtcta
ggcgtggtctccgatgccatctttgatctgggtgtctcgctgtcctccttcaacctggat
gattcggaggtggcgttgcttcaagccgtgattttgctttcatcggatcgtccaggtttg
acgagcgtagaacggatagagcgctgtcaggaggagttcctcttggccttcgaacattac
atcaactaccgcaagcacaaggtgtctcacttctggcccaagctgctgatgaaggtgaca
gacctgcgcatgattggtgcctgccatgccagccgcttcctgcacatgaaggtggagtgt
cccacggagctctttccgcccctcttcctggaagtgttcgaagactga
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