Cyprinus carpio (common carp): 109111938
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Entry
109111938 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109111938
03036 Chromosome and associated proteins [BR:
ccar03036
]
109111938
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109111938
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109111938
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109111938
UBL E3 ligases
109111938
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
109111938
Cilium and associated proteins [BR:
ccar03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109111938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-C3HC4_4
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
109111938
NCBI-ProteinID:
XP_018980484
UniProt:
A0A9Q9VK04
LinkDB
All DBs
Position
A23:complement(19578327..19583664)
Genome browser
AA seq
960 aa
AA seq
DB search
MMAPSKMKLRVRKRDSAGRSSQRLLANASPDSKCPICLDGFNNVASLDRCLHRFCFHCIY
EWSKNKAECPLCKQPFHSIFHSVKGENDFKEFVLRPPESRAPQNATAGDPSERMLRPRVL
RGRERRSHRVQNPAPPSSPPLEDDVMFDGLTDAAAFAQEQGVQQMVLRLTARRHGRRSLR
RLCNQDVVAFRRALYRTGVRVRNSRDAGRQRDISATFLRQNPGCLRRLLPWLQRELTVLY
GSHGSLVNIVQNIIISRIMNYNMEDTAIRDELRPFLLARTDHFLHELVSFARSTLNMEAY
DQQAVYDCPAPSYEEGSGSDLSVIAISEDDDDNDSEDNVTENPSAVQERLASVATASGAE
SLPSQSAWDDETPGPSYSTLLPSSSLLQGEGAEPSSSTDPPLSTLDSTDPAASGSVSAGP
GEDDVEEECLIVGYVKPMAERTPELVQLSSDSSEEEQEPAATETAASVTKSEESQVQIPS
QSHMNPHTQNPPTPPSPFSIQNKKPPDGVGSYSKEQEADYLSSRGHQSKDGSRSHSRQSQ
DDSRFRGHRRHRSHRRSGSKEKDKSLEQSRHIETPDCSPSQTQSWTQSPAVSVWSGSPAS
KSHSSDCSPSRNNSDRSGEHSCHARERFLHSPSYSRRRKTKERRSRSPDSPDSFLGSHHP
REAQRCRKRRKRSVSSSSADLHSERSCLDKPSGKRKYKTRHLERAAQRQHKERTATKEKR
HRERRLSRERSPSVEIIYEQRAPDPHWVQRKRRRHRKRRRELRSPTVITIDSDSDRTIDC
LDRVLDVIDQTAADVEQRDGSPEQDSIQNASCTLDSSNPLSEPSSPTGRSDPTIEHTLNL
DDCAVNVVDNSSSDCSRTMDASNHEEFMSDPFPVDSIITTPPSDVRLLETILQDLVDFLP
GAEXYMGQSPHTSSPGQQEPASSQQRDQSEEMRGDAKNLENENTDGDGQQKTVTNTASYN
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgccttctaagatgaagttgcgtgtgaggaagagagacagcgctggcagatct
tctcagcgtttattggccaacgcgtcgcctgattccaaatgccccatctgcctcgatggc
ttcaataacgtggcgtcgctggaccgctgcctgcaccggttctgtttccattgcatctac
gagtggtccaagaacaaagccgagtgtccgctctgtaagcagcccttccactccatattc
cactccgtcaaaggggaaaacgactttaaggagttcgtgctgcggccgccggagagcaga
gcacctcagaacgccaccgctggcgatccatccgagcgcatgctccgcccccgagttctc
agaggccgggagaggcggagccacagggtgcagaaccccgcccctccctcctcgcctccg
ctggaggacgacgtcatgttcgacggcctgacggacgcagcggcgttcgcgcaggaacaa
ggcgtgcagcagatggtgctgcgactgacggcgcgcagacatgggcgcaggagcctgcgg
cgcttgtgcaaccaagacgtggtggcgttccggcgcgcgctgtacaggactggcgtacgc
gtgcgcaactcgagggacgccggcaggcaaagagacatttcggctacattcttgcgacaa
aaccctggctgcttgcgccgactgttgccttggctgcagcgcgagctcaccgttttgtac
ggttcgcacggctcgctggtgaacatcgtgcagaacatcatcatctcgcgcatcatgaac
tacaacatggaggacacggccatccgagacgagctccgccccttcctgctggcgcgcacc
gaccacttcctgcacgagctggtgagcttcgcccgctccaccctcaacatggaggcgtac
gaccagcaggccgtttatgactgtcccgctcccagctacgaggagggcagcggctcggac
ctttctgttatcgccatctccgaggatgatgatgataatgacagtgaggacaatgtcaca
gagaatccctctgctgtccaggaacgccttgcatccgttgccacggcaagtggagcggaa
agtttgccaagtcagtcagcgtgggatgatgagacgcctggtccgtcctattccaccctc
ctcccctcttccagcctattgcagggcgagggggcggagccaagctcaagcacagaccct
cccctcagcaccctggactcgactgaccctgcggcaagtggcagcgtgtcagctggaccg
ggtgaagatgatgtagaggaagagtgcctaattgtgggatacgtgaaaccgatggccgaa
cggaccccagaacttgttcagctctcctcagattcgtctgaagaggagcaagagccggcc
gccaccgagacagcggcctccgtaacgaaatcagaggaatcccaagtgcagatcccgtca
cagtcccacatgaaccctcatacccaaaacccccccacacccccctcccccttttcaatc
caaaacaaaaaacccccggatggagtcgggtcatacagcaaagaacaagaggccgactac
ttgtcctcccgtggtcaccagtccaaagatggttcacggtcacattcacggcagagtcaa
gatgactccaggttcagaggtcacaggaggcacagaagtcatcggcgctctggcagcaaa
gagaaggacaagagtttagaacaatcacggcacatcgagaccccagattgctcgccaagc
caaacacagagctggacacaaagcccagcggtgtccgtttggagcggtagccccgcctct
aagtcacacagtagcgactgctctccctcccgaaacaacagcgacaggagtggagagcat
tcgtgccatgcaagagagagattcttgcactctccttcctactccagaaggagaaaaacc
aaggaaaggaggagtaggtcacctgactcacctgattcgttccttggctcccaccatccc
cgtgaggcacagcgttgtcgtaaacgccgcaagcgttctgttagcagcagcagtgctgat
ttgcactccgaaaggtcctgcttggacaaacccagtggcaaacgcaagtacaaaacccgg
cacttggagcgagcagcccagcggcagcacaaggagagaaccgcaaccaaggaaaagcgg
cacagagaacggcgactcagcagggaacgatctccaagtgtggagatcatctatgaacaa
agggcacctgacccacactgggtccagcggaagaggaggaggcaccggaagcgaagaagg
gagctgcgttcacccactgtgatcacgatagatagcgacagcgaccgtaccatcgactgt
ctggaccgcgtcttggatgttatagaccaaaccgctgctgatgtcgagcaaagggatggg
agtcctgagcaagattccatccagaatgcaagttgtaccttggattcttcaaatcctcta
tctgagccctcgagtcccacgggccgcagtgacccaaccattgaacatacacttaacctg
gatgactgtgcggtgaatgtagtcgacaacagtagttctgactgctcccgaactatggat
gccagtaaccacgaagagtttatgtctgaccctttcccagtggattccattataacaacc
ccaccttcggatgtgaggctgctggaaaccatactgcaagatcttgtggatttcctaccg
ggggcagagtagtacatggggcagagtcctcatacaagttctcccggacaacaggaacct
gcttctagccaacaaagagaccaatcagaggagatgagaggagatgccaaaaacttagag
aacgagaacacagatggcgacggacaacaaaagacggtgaccaacactgctagctacaac
taa
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